prot_P-canaliculata_contig100100.59.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100100.59.1
Unique Nameprot_P-canaliculata_contig100100.59.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length112
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100100.59.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..110
NoneNo IPR availableTMHMMTMhelixcoord: 83..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100100contigP-canaliculata_contig100100:436..815 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100100.59.1mRNA_P-canaliculata_contig100100.59.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100100 249..823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100100.59.1 ID=prot_P-canaliculata_contig100100.59.1|Name=mRNA_P-canaliculata_contig100100.59.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=112bp
MAARVKEEEKASGYRQRNRDTEEADKVEVSPGVTVASLRRFRSALIGPTQ
GSPKRRQLCYAFGCMVVIRGGYRMACGWHYTKLSLSSALLQFFSGMCFVF
DTVPLFLSFFV*
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