prot_P-canaliculata_contig100064.57.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100064.57.1
Unique Nameprot_P-canaliculata_contig100064.57.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length136
Homology
BLAST of mRNA_P-canaliculata_contig100064.57.1 vs. uniprot
Match: UPI001F1FF6EA (SufE family protein n=2 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI001F1FF6EA)

HSP 1 Score: 217 bits (553), Expect = 9.730e-71
Identity = 105/132 (79.55%), Postives = 119/132 (90.15%), Query Frame = 0
Query:    1 MTYPANIQDMIDDFAFLDDWEDRYMHVIDLGKGLPPLPTGAQTEQNKVKGCASQVWLISEEADGVWTFAGDSDAHIVKGLVAIVLEIFSGRSAADIAALDANDILAKLGLSEHLSAQRSNGLAAMIGRIKAE 132
            MTYP NIQD+IDDFAFLDDWEDRYMHVIDLGK LPPLP  A+T+ NKVKGCASQVWL+S++ +  W F+GDSDAHIVKGLVAIVLEI+SGR+A +I+ LDANDIL+KLGLSEHLSAQR+NGLAAMI RIK E
Sbjct:    4 MTYPENIQDLIDDFAFLDDWEDRYMHVIDLGKALPPLPLEAKTDVNKVKGCASQVWLVSDQKNDAWKFSGDSDAHIVKGLVAIVLEIYSGRTAEEISKLDANDILSKLGLSEHLSAQRANGLAAMIARIKTE 135          
BLAST of mRNA_P-canaliculata_contig100064.57.1 vs. uniprot
Match: UPI000406440D (SufE family protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000406440D)

HSP 1 Score: 184 bits (467), Expect = 1.270e-57
Identity = 95/138 (68.84%), Postives = 107/138 (77.54%), Query Frame = 0
Query:    1 MTYPANIQDMIDDFAFLDDWEDRYMHVIDLGKGLPPLPTGAQTEQNKVKGCASQVWLISEEADG---VWTFAGDSDAHIVKGLVAIVLEIFSGRSAADIAALDANDILAKLGLSEHLSAQRSNGLAAMIGRIKAETAA 135
            M+YP +IQDMIDDFAFL DWE+RYMHVIDLGK LPPL    + E  KVKGC SQVWL+S++  G   V TF GDSDAHIVKGLVA+ L+IFS R A+ I  LDA +IL +L L EHLS QRSNGL AMIGRIKAE AA
Sbjct:    1 MSYPQDIQDMIDDFAFLSDWEERYMHVIDLGKALPPLSEAEKNEATKVKGCVSQVWLVSDKTGGDDPVLTFRGDSDAHIVKGLVAVALQIFSNRKASKIHELDATEILKELDLQEHLSPQRSNGLKAMIGRIKAEAAA 138          
BLAST of mRNA_P-canaliculata_contig100064.57.1 vs. uniprot
Match: A0A420WFH8_9PROT (Cysteine desulfuration protein SufE n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WFH8_9PROT)

HSP 1 Score: 179 bits (455), Expect = 1.070e-55
Identity = 92/132 (69.70%), Postives = 103/132 (78.03%), Query Frame = 0
Query:    4 PANIQDMIDDFAFLDDWEDRYMHVIDLGKGLPPLPTGAQTEQNKVKGCASQVWLISE---EADGVWTFAGDSDAHIVKGLVAIVLEIFSGRSAADIAALDANDILAKLGLSEHLSAQRSNGLAAMIGRIKAE 132
            P NIQD+I DF FLD WEDRYMHVID+GK LPPL    +T+  KVKGC SQVWL+SE   E + V  F GDSDAHIVKGLVA+VLEIFSGR A++I  L+A  IL KLGLSEHLS QRSNGL AM+ RIKAE
Sbjct:   10 PENIQDLISDFEFLDSWEDRYMHVIDMGKSLPPLEPALKTDATKVKGCVSQVWLVSERSGEENPVLKFKGDSDAHIVKGLVAVVLEIFSGRHASEILKLEARSILEKLGLSEHLSPQRSNGLQAMVARIKAE 141          
BLAST of mRNA_P-canaliculata_contig100064.57.1 vs. uniprot
Match: A0A7C5LYB0_9PROT (SufE family protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7C5LYB0_9PROT)

HSP 1 Score: 177 bits (448), Expect = 9.290e-55
Identity = 88/130 (67.69%), Postives = 100/130 (76.92%), Query Frame = 0
Query:    1 MTYPANIQDMIDDFAFLDDWEDRYMHVIDLGKGLPPLPTGAQTEQNKVKGCASQVWLISEEADGVWTFAGDSDAHIVKGLVAIVLEIFSGRSAADIAALDANDILAKLGLSEHLSAQRSNGLAAMIGRIK 130
            M    NIQD+IDDFAFLDDWEDRYMHVI++GK L PL    Q ++NKV GC SQVWL+ E  DG   F GDSDAHIVKGLVAIVLEIFSGR+  DI ALDA  I+  LGL+EHLS QR+NGL +MI RI+
Sbjct:    1 MELAENIQDLIDDFAFLDDWEDRYMHVIEMGKALTPLSPSEQNDENKVSGCVSQVWLVHELRDGKLYFRGDSDAHIVKGLVAIVLEIFSGRTPQDIRALDAESIIKNLGLAEHLSTQRANGLKSMIARIQ 130          
BLAST of mRNA_P-canaliculata_contig100064.57.1 vs. uniprot
Match: A0A7W7YYA6_9HYPH (Cysteine desulfuration protein SufE n=1 Tax=Shinella fusca TaxID=544480 RepID=A0A7W7YYA6_9HYPH)

HSP 1 Score: 169 bits (429), Expect = 7.720e-52
Identity = 87/133 (65.41%), Postives = 105/133 (78.95%), Query Frame = 0
Query:    5 ANIQDMIDDFAFLDDWEDRYMHVIDLGKGLPPLPTGAQTEQNKVKGCASQVWLISEE---ADGVWTFAGDSDAHIVKGLVAIVLEIFSGRSAADIAALDANDILAKLGLSEHLSAQRSNGLAAMIGRIKAETA 134
            A +QD+IDDFAFL+DWEDRY +VI+LGK LP LP   +T QNKV+GCASQVWL+S     AD V TF GDSDAHIV+GLVAIVL I+SGR A+DIAA DA D   ++GL EHLS+QR+NGL +M+ RI+ E A
Sbjct:    2 ATLQDIIDDFAFLEDWEDRYRYVIELGKALPDLPEDKRTAQNKVQGCASQVWLVSHTEGGADPVMTFEGDSDAHIVRGLVAIVLAIYSGRHASDIAATDAIDTFNEIGLVEHLSSQRANGLRSMVKRIREEAA 134          
BLAST of mRNA_P-canaliculata_contig100064.57.1 vs. uniprot
Match: UPI001783A88F (SufE family protein n=1 Tax=Rhizobium sp. CFBP 8762 TaxID=2775279 RepID=UPI001783A88F)

HSP 1 Score: 167 bits (423), Expect = 6.730e-51
Identity = 83/132 (62.88%), Postives = 107/132 (81.06%), Query Frame = 0
Query:    7 IQDMIDDFAFLDDWEDRYMHVIDLGKGLPPLPTGAQTEQNKVKGCASQVWLISE----EADGVWTFAGDSDAHIVKGLVAIVLEIFSGRSAADIAALDANDILAKLGLSEHLSAQRSNGLAAMIGRIKAETA 134
            I ++ID+F++LDDWEDRY +VI+LGK LP LP   +T +NKV+GCASQVWL++     EAD V TF GDSDAHIV+GLVAIVL  +SG++A++IA LDA D+  K+GL EHLS+QR+NGL +MIGRIK+E A
Sbjct:    3 IDEIIDEFSYLDDWEDRYRYVIELGKSLPDLPETERTAENKVQGCASQVWLVTHQQGGEADPVLTFEGDSDAHIVRGLVAIVLATYSGKAASEIATLDALDVFGKIGLVEHLSSQRANGLRSMIGRIKSEAA 134          
BLAST of mRNA_P-canaliculata_contig100064.57.1 vs. uniprot
Match: A0A2G2J867_9PROT (Cysteine desulfuration protein SufE n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2J867_9PROT)

HSP 1 Score: 167 bits (422), Expect = 9.860e-51
Identity = 88/138 (63.77%), Postives = 101/138 (73.19%), Query Frame = 0
Query:    1 MTYPANIQDMIDDFAFLDDWEDRYMHVIDLGKGLPPLPTGAQTEQNKVKGCASQVWLISE---EADGVWTFAGDSDAHIVKGLVAIVLEIFSGRSAADIAALDANDILAKLGLSEHLSAQRSNGLAAMIGRIKAETAA 135
            MTYP NIQ+MIDDFAFL+DWEDRYMHVI++GK L PL     T  NKV GC SQVWLI++     +    + GDSDAHIVKGLVAIV+ IFSGR+  DI   DA  IL +LGLSEHLS QRSNGL AMI RI+ +  A
Sbjct:    1 MTYPQNIQNMIDDFAFLEDWEDRYMHVIEMGKALAPLSEADHTPANKVNGCVSQVWLITDVHTAPEPTLHYRGDSDAHIVKGLVAIVINIFSGRTPKDIINTDAKAILDQLGLSEHLSMQRSNGLNAMIARIQQDARA 138          
BLAST of mRNA_P-canaliculata_contig100064.57.1 vs. uniprot
Match: A0A386DU92_9HYPH (Cysteine desufuration protein n=5 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A386DU92_9HYPH)

HSP 1 Score: 166 bits (419), Expect = 2.650e-50
Identity = 84/132 (63.64%), Postives = 103/132 (78.03%), Query Frame = 0
Query:    5 ANIQDMIDDFAFLDDWEDRYMHVIDLGKGLPPLPTGAQTEQNKVKGCASQVWLIS----EEADGVWTFAGDSDAHIVKGLVAIVLEIFSGRSAADIAALDANDILAKLGLSEHLSAQRSNGLAAMIGRIKAE 132
            A +Q +IDDFAFLDDWEDRY +VI+LGK LP LP   +T +NKV+GCASQVWL+S    + AD V TF GDSDAHIV+GLVAIVL  +SG+ A+DI A DA DI  K+GL EHLS+QR+NGL +M+ RI+ E
Sbjct:    2 AQLQQIIDDFAFLDDWEDRYRYVIELGKALPDLPEEQKTSENKVQGCASQVWLVSHVADDSADPVMTFDGDSDAHIVRGLVAIVLATYSGKHASDIVATDALDIFDKIGLVEHLSSQRANGLRSMVKRIREE 133          
BLAST of mRNA_P-canaliculata_contig100064.57.1 vs. uniprot
Match: A0A7W3WAR6_9HYPH (SufE family protein n=1 Tax=Rhizobium sp. G21 TaxID=2758439 RepID=A0A7W3WAR6_9HYPH)

HSP 1 Score: 165 bits (418), Expect = 3.530e-50
Identity = 83/131 (63.36%), Postives = 102/131 (77.86%), Query Frame = 0
Query:    5 ANIQDMIDDFAFLDDWEDRYMHVIDLGKGLPPLPTGAQTEQNKVKGCASQVWLISEEADG---VWTFAGDSDAHIVKGLVAIVLEIFSGRSAADIAALDANDILAKLGLSEHLSAQRSNGLAAMIGRIKAE 132
            A I D+I DFAFLDDWEDRY +VI+LGK LP LP   +T  NKV+GCASQVWL+SE  +G   V TF GDSDAHIV+GLVAIVL I+SG+ A+D+A LDA D   ++G+ EHLSAQR+NGL +M+ RI+ E
Sbjct:    2 AAIDDIISDFAFLDDWEDRYRYVIELGKALPDLPEEDRTADNKVRGCASQVWLVSEPGEGQDPVMTFRGDSDAHIVRGLVAIVLAIYSGKHASDVAKLDALDTFKEIGMIEHLSAQRANGLRSMVNRIREE 132          
BLAST of mRNA_P-canaliculata_contig100064.57.1 vs. uniprot
Match: UPI001E315A8C (SufE family protein n=2 Tax=unclassified Rhizobium TaxID=2613769 RepID=UPI001E315A8C)

HSP 1 Score: 165 bits (418), Expect = 3.530e-50
Identity = 83/131 (63.36%), Postives = 104/131 (79.39%), Query Frame = 0
Query:    5 ANIQDMIDDFAFLDDWEDRYMHVIDLGKGLPPLPTGAQTEQNKVKGCASQVWLISEEADG---VWTFAGDSDAHIVKGLVAIVLEIFSGRSAADIAALDANDILAKLGLSEHLSAQRSNGLAAMIGRIKAE 132
            A+I+ +I+DF+FLD+WEDRY +VI+LGK LP LP   +T +NKV+GCASQVWL+S   +G   V TF GDSDAHIV+GLVAIVL I+SGR A+DIAA DA D    +GL EHLS+QR+NGL +MI RI+AE
Sbjct:    2 ASIEQIIEDFSFLDEWEDRYRYVIELGKALPDLPESEKTAENKVQGCASQVWLVSHRGEGPDPVMTFEGDSDAHIVRGLVAIVLSIYSGRKASDIAATDAIDTFNTIGLVEHLSSQRANGLRSMIKRIRAE 132          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100064.57.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F1FF6EA9.730e-7179.55SufE family protein n=2 Tax=Litorimonas cladophora... [more]
UPI000406440D1.270e-5768.84SufE family protein n=1 Tax=Hellea balneolensis Ta... [more]
A0A420WFH8_9PROT1.070e-5569.70Cysteine desulfuration protein SufE n=1 Tax=Litori... [more]
A0A7C5LYB0_9PROT9.290e-5567.69SufE family protein n=1 Tax=Hellea balneolensis Ta... [more]
A0A7W7YYA6_9HYPH7.720e-5265.41Cysteine desulfuration protein SufE n=1 Tax=Shinel... [more]
UPI001783A88F6.730e-5162.88SufE family protein n=1 Tax=Rhizobium sp. CFBP 876... [more]
A0A2G2J867_9PROT9.860e-5163.77Cysteine desulfuration protein SufE n=1 Tax=Robigi... [more]
A0A386DU92_9HYPH2.650e-5063.64Cysteine desufuration protein n=5 Tax=Rhizobium/Ag... [more]
A0A7W3WAR6_9HYPH3.530e-5063.36SufE family protein n=1 Tax=Rhizobium sp. G21 TaxI... [more]
UPI001E315A8C3.530e-5063.36SufE family protein n=2 Tax=unclassified Rhizobium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003808Fe-S metabolism associated domain, SufE-likePFAMPF02657SufEcoord: 12..131
e-value: 8.7E-46
score: 154.7
IPR003808Fe-S metabolism associated domain, SufE-likePANTHERPTHR43597FAMILY NOT NAMEDcoord: 3..133
NoneNo IPR availableGENE3D3.90.1010.10coord: 3..135
e-value: 2.1E-49
score: 168.6
NoneNo IPR availablePANTHERPTHR43597:SF2SULFUR ACCEPTOR PROTEIN CSDEcoord: 3..133
NoneNo IPR availableSUPERFAMILY82649SufE/NifUcoord: 2..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100064contigP-canaliculata_contig100064:175..582 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100064.57.1mRNA_P-canaliculata_contig100064.57.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100064 175..582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100064.57.1 ID=prot_P-canaliculata_contig100064.57.1|Name=mRNA_P-canaliculata_contig100064.57.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=136bp
MTYPANIQDMIDDFAFLDDWEDRYMHVIDLGKGLPPLPTGAQTEQNKVKG
CASQVWLISEEADGVWTFAGDSDAHIVKGLVAIVLEIFSGRSAADIAALD
ANDILAKLGLSEHLSAQRSNGLAAMIGRIKAETAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003808Fe-S_metab-assoc_dom