prot_P-canaliculata_contig100045.54.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig100045.54.1
Unique Nameprot_P-canaliculata_contig100045.54.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length97
Homology
[Close]
BLAST of mRNA_P-canaliculata_contig100045.54.1 vs. uniprot
Match: A0A3B0YBJ9_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0YBJ9_9ZZZZ)

HSP 1 Score: 83.6 bits (205), Expect = 2.640e-18
Identity = 49/106 (46.23%), Postives = 58/106 (54.72%), Query Frame = 0 
Query:    5 QPGSLGANHSCPDPKAGRE-------------TPIWPCSGWGLPCRRCCQNPGALLPHPFTLACEVSFHRRFALCGTFPECAPESAHPAGVTRHPCFVEPGLSSRT 97
            +PGS+  +HS   P A R              +PIW CSGWGLPC RCCQ  GALLPH FTL    +  RR+  CGTF   +P   + A     PC +EPGLSS T
Sbjct:   10 KPGSVEDSHSSGTPVAERLKRPTREQRGPRQCSPIWSCSGWGLPCHRCCQRRGALLPHHFTLTGAYAL-RRYIFCGTFRRLSPPRRYLA-----PCPMEPGLSSMT 109
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig100045.54.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A3B0YBJ9_9ZZZZ2.640e-1846.23Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig100045contigP-canaliculata_contig100045:120..410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig100045.54.1mRNA_P-canaliculata_contig100045.54.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig100045 120..410 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig100045.54.1 ID=prot_P-canaliculata_contig100045.54.1|Name=mRNA_P-canaliculata_contig100045.54.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=97bp
RSSSQPGSLGANHSCPDPKAGRETPIWPCSGWGLPCRRCCQNPGALLPHP
FTLACEVSFHRRFALCGTFPECAPESAHPAGVTRHPCFVEPGLSSRT
back to top