prot_P-canaliculata_contig103691.512.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-canaliculata_contig103691.512.1
Unique Name	prot_P-canaliculata_contig103691.512.1
Type	polypeptide
Organism	Pelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length	126

Homology

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BLAST of mRNA_P-canaliculata_contig103691.512.1 vs. uniprot
Match: UPI00047E53F9 (iron-sulfur cluster assembly accessory protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI00047E53F9)

HSP 1 Score: 205 bits (521), Expect = 3.100e-66
Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 0

Query:    5 TTRTRRPRPKLVTLTDEAAARVSEILAERGEGYLRVGVKNGGCAGMEYLMDYVTEPAKFDEVVEDKGVQIVVDAKAVLFLLGSVVDYEVDILSSKFTFKNPQQTDACGCGESVTIIP 121
            TTRTRRPRPKLVTLTD AAARV EIL ERGEGYLRVGV NGGCAGMEY+MDYV+E  KFDEVVEDK VQIVVDAKAVLF+LGSVVDYEVD++SSKFTFKNP QTDACGCGESVTI+P
Sbjct:    4 TTRTRRPRPKLVTLTDAAAARVREILDERGEGYLRVGVTNGGCAGMEYVMDYVSEIEKFDEVVEDKDVQIVVDAKAVLFILGSVVDYEVDVMSSKFTFKNPNQTDACGCGESVTIVP 120

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BLAST of mRNA_P-canaliculata_contig103691.512.1 vs. uniprot
Match: A0A420WK28_9PROT (Iron-sulfur cluster assembly protein n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WK28_9PROT)

HSP 1 Score: 197 bits (501), Expect = 3.700e-63
Identity = 99/116 (85.34%), Postives = 106/116 (91.38%), Query Frame = 0

Query:    6 TRTRRPRPKLVTLTDEAAARVSEILAERGEGYLRVGVKNGGCAGMEYLMDYVTEPAKFDEVVEDKGVQIVVDAKAVLFLLGSVVDYEVDILSSKFTFKNPQQTDACGCGESVTIIP 121
            TR+RRPRPKLVTLTD AA +V  ILAER +GYLRVGVKNGGCAGMEY+MDYV E  KFDEVVED GV+IVVDAKAVLF+LGSVVDYEVDILSSKFTFKNP QTDACGCGESVTI+P
Sbjct:    8 TRSRRPRPKLVTLTDAAAEQVKSILAERDKGYLRVGVKNGGCAGMEYIMDYVPEIEKFDEVVEDNGVKIVVDAKAVLFILGSVVDYEVDILSSKFTFKNPNQTDACGCGESVTIVP 123

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BLAST of mRNA_P-canaliculata_contig103691.512.1 vs. uniprot
Match: A0A8J3G219_9PROT (Fe-S_biosyn domain-containing protein n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3G219_9PROT)

HSP 1 Score: 191 bits (486), Expect = 7.380e-61
Identity = 93/115 (80.87%), Postives = 105/115 (91.30%), Query Frame = 0

Query:    9 RRPRPKLVTLTDEAAARVSEILAERGEGYLRVGVKNGGCAGMEYLMDYVTEPAKFDEVVEDKGVQIVVDAKAVLFLLGSVVDYEVDILSSKFTFKNPQQTDACGCGESVTIIPVI 123
            RR RPKLVTLTD AA +V EILAERGEG+LRVGVKNGGCAGMEY+MDYV+EPAKFDEVVEDKGV+IVVDAKAVLF+LG+ VD+E  +L SKFTF+NP QTDACGCGESVTI+P +
Sbjct:   12 RRARPKLVTLTDAAADQVREILAERGEGFLRVGVKNGGCAGMEYMMDYVSEPAKFDEVVEDKGVKIVVDAKAVLFILGATVDHETTLLHSKFTFRNPNQTDACGCGESVTIVPAL 126

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BLAST of mRNA_P-canaliculata_contig103691.512.1 vs. uniprot
Match: UPI00167385CE (iron-sulfur cluster assembly accessory protein n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI00167385CE)

HSP 1 Score: 189 bits (479), Expect = 9.180e-60
Identity = 93/110 (84.55%), Postives = 99/110 (90.00%), Query Frame = 0

Query:   14 KLVTLTDEAAARVSEILAERGEGYLRVGVKNGGCAGMEYLMDYVTEPAKFDEVVEDKGVQIVVDAKAVLFLLGSVVDYEVDILSSKFTFKNPQQTDACGCGESVTIIPVI 123
            KLVTLTD+AAARV EIL ERGEGYLRVGV NGGCAGMEYLMDYV EP KFDEVVEDKGVQIVVD+KAVLFLLGSVVDYE  +L S+FTF NP QTDACGCGESVTI+P +
Sbjct:   19 KLVTLTDDAAARVREILDERGEGYLRVGVTNGGCAGMEYLMDYVAEPEKFDEVVEDKGVQIVVDSKAVLFLLGSVVDYETTLLHSRFTFTNPNQTDACGCGESVTIVPAV 128

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BLAST of mRNA_P-canaliculata_contig103691.512.1 vs. uniprot
Match: A0A2G2GK78_9PROT (FeS assembly scaffold SufA n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2GK78_9PROT)

HSP 1 Score: 187 bits (476), Expect = 1.850e-59
Identity = 94/114 (82.46%), Postives = 101/114 (88.60%), Query Frame = 0

Query:    9 RRPRPKLVTLTDEAAARVSEILAERGEGYLRVGVKNGGCAGMEYLMDYVTEPAKFDEVVEDKGVQIVVDAKAVLFLLGSVVDYEVDILSSKFTFKNPQQTDACGCGESVTIIPV 122
            R+PRPKLVTLTD AA RV EILAER  GYLRVGVKNGGCAGMEY+MDYV E  KFDEVVEDK VQIVVD+KAVLFLLGSVVDYE  ++SS+FTFKNP QTDACGCGESVTI P+
Sbjct:    3 RKPRPKLVTLTDAAAERVREILAERERGYLRVGVKNGGCAGMEYIMDYVAEIEKFDEVVEDKDVQIVVDSKAVLFLLGSVVDYETTMMSSRFTFKNPNQTDACGCGESVTITPM 116

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BLAST of mRNA_P-canaliculata_contig103691.512.1 vs. uniprot
Match: A0A520XJE2_9ACTN (Iron-sulfur cluster assembly accessory protein n=2 Tax=Bacteria TaxID=2 RepID=A0A520XJE2_9ACTN)

HSP 1 Score: 187 bits (475), Expect = 2.890e-59
Identity = 94/112 (83.93%), Postives = 98/112 (87.50%), Query Frame = 0

Query:   10 RPRPKLVTLTDEAAARVSEILAERGEGYLRVGVKNGGCAGMEYLMDYVTEPAKFDEVVEDKGVQIVVDAKAVLFLLGSVVDYEVDILSSKFTFKNPQQTDACGCGESVTIIP 121
            RPRPKLVTLTD AAARV EILAER +GYLRVGVKNGGCAGMEY MDYV +  KFDEVVED GV IVVD+KAVLFLLGSVVDYE  I+ SKFTFKNP QTDACGCGESVTI P
Sbjct:    4 RPRPKLVTLTDAAAARVQEILAERDQGYLRVGVKNGGCAGMEYTMDYVADIEKFDEVVEDNGVTIVVDSKAVLFLLGSVVDYETTIMDSKFTFKNPNQTDACGCGESVTITP 115

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BLAST of mRNA_P-canaliculata_contig103691.512.1 vs. uniprot
Match: A0A2D7IV23_9PROT (FeS assembly scaffold SufA n=2 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A2D7IV23_9PROT)

HSP 1 Score: 185 bits (470), Expect = 1.620e-58
Identity = 91/116 (78.45%), Postives = 99/116 (85.34%), Query Frame = 0

Query:    9 RRPRPKLVTLTDEAAARVSEILAERGEGYLRVGVKNGGCAGMEYLMDYVTEPAKFDEVVEDKGVQIVVDAKAVLFLLGSVVDYEVDILSSKFTFKNPQQTDACGCGESVTIIPVIE 124
            RRPRPKLVTLTD AA RV EI+  +G GYLRVGVKNGGCAGMEY+MDY  +P  FDE+VED GV+IVVDAKAVLFLLGSVVDYEV  L +KF F NP QTDACGCGESVTIIPV+E
Sbjct:    3 RRPRPKLVTLTDAAAERVREIMERKGSGYLRVGVKNGGCAGMEYVMDYADQPEAFDEIVEDNGVKIVVDAKAVLFLLGSVVDYEVTPLHAKFVFNNPNQTDACGCGESVTIIPVVE 118

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BLAST of mRNA_P-canaliculata_contig103691.512.1 vs. uniprot
Match: UPI000A039315 (iron-sulfur cluster assembly accessory protein n=1 Tax=Henriciella litoralis TaxID=568102 RepID=UPI000A039315)

HSP 1 Score: 185 bits (469), Expect = 2.230e-58
Identity = 90/113 (79.65%), Postives = 100/113 (88.50%), Query Frame = 0

Query:    9 RRPRPKLVTLTDEAAARVSEILAERGEGYLRVGVKNGGCAGMEYLMDYVTEPAKFDEVVEDKGVQIVVDAKAVLFLLGSVVDYEVDILSSKFTFKNPQQTDACGCGESVTIIP 121
            RRPRP+LVTLTD AA RV EI++E+G GYLRVGVKNGGCAGMEY+MDYVT P KFDEVVEDKGV+IVVDAKAVLFLLGS+VDYE   L  KF F+NP +TDACGCGESVTI+P
Sbjct:    3 RRPRPQLVTLTDAAATRVQEIMSEKGAGYLRVGVKNGGCAGMEYVMDYVTAPEKFDEVVEDKGVKIVVDAKAVLFLLGSIVDYESTPLHEKFVFRNPNETDACGCGESVTIMP 115

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BLAST of mRNA_P-canaliculata_contig103691.512.1 vs. uniprot
Match: A0A7V5U1N4_9PROT (Iron-sulfur cluster assembly accessory protein n=1 Tax=Hellea balneolensis TaxID=287478 RepID=A0A7V5U1N4_9PROT)

HSP 1 Score: 183 bits (465), Expect = 1.060e-57
Identity = 90/114 (78.95%), Postives = 98/114 (85.96%), Query Frame = 0

Query:    9 RRPRPKLVTLTDEAAARVSEILAERGEGYLRVGVKNGGCAGMEYLMDYVTEPAKFDEVVEDKGVQIVVDAKAVLFLLGSVVDYEVDILSSKFTFKNPQQTDACGCGESVTIIPV 122
            RRPRPKLVTLTD AA RV EIL+E+G G+LRVGVKNGGCAGMEYLMDYV +P  FDE+VED GVQIVVDAKAVLFLLGS +DYE   L S+F F NP QTDACGCGESVTI+PV
Sbjct:    6 RRPRPKLVTLTDRAAERVREILSEKGRGFLRVGVKNGGCAGMEYLMDYVEKPEPFDEIVEDNGVQIVVDAKAVLFLLGSEIDYETTPLHSRFVFHNPNQTDACGCGESVTIVPV 119

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BLAST of mRNA_P-canaliculata_contig103691.512.1 vs. uniprot
Match: UPI0008DB169B (iron-sulfur cluster assembly accessory protein n=1 Tax=Hyphomonas sp. Mor2 TaxID=1906738 RepID=UPI0008DB169B)

HSP 1 Score: 182 bits (463), Expect = 1.830e-57
Identity = 89/113 (78.76%), Postives = 98/113 (86.73%), Query Frame = 0

Query:    9 RRPRPKLVTLTDEAAARVSEILAERGEGYLRVGVKNGGCAGMEYLMDYVTEPAKFDEVVEDKGVQIVVDAKAVLFLLGSVVDYEVDILSSKFTFKNPQQTDACGCGESVTIIP 121
            RRPRPKLVTLTD AAARV EI++E+G G+LRVGV NGGCAGMEY+MDYV  P   DE+VEDKGV+IVVDAKAVLFLLGS+VDYE  +L  KFTF NP QTDACGCGESVTIIP
Sbjct:    3 RRPRPKLVTLTDAAAARVGEIMSEKGAGFLRVGVTNGGCAGMEYVMDYVEAPEPLDEIVEDKGVKIVVDAKAVLFLLGSIVDYETTLLHEKFTFTNPNQTDACGCGESVTIIP 115

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig103691.512.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig103691.512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI00047E53F9	3.100e-66	88.03	iron-sulfur cluster assembly accessory protein n=1...	[more]
A0A420WK28_9PROT	3.700e-63	85.34	Iron-sulfur cluster assembly protein n=1 Tax=Litor...	[more]
A0A8J3G219_9PROT	7.380e-61	80.87	Fe-S_biosyn domain-containing protein n=1 Tax=Algi...	[more]
UPI00167385CE	9.180e-60	84.55	iron-sulfur cluster assembly accessory protein n=1...	[more]
A0A2G2GK78_9PROT	1.850e-59	82.46	FeS assembly scaffold SufA n=1 Tax=Robiginitomacul...	[more]
A0A520XJE2_9ACTN	2.890e-59	83.93	Iron-sulfur cluster assembly accessory protein n=2...	[more]
A0A2D7IV23_9PROT	1.620e-58	78.45	FeS assembly scaffold SufA n=2 Tax=Hyphomonadaceae...	[more]
UPI000A039315	2.230e-58	79.65	iron-sulfur cluster assembly accessory protein n=1...	[more]
A0A7V5U1N4_9PROT	1.060e-57	78.95	Iron-sulfur cluster assembly accessory protein n=1...	[more]
UPI0008DB169B	1.830e-57	78.76	iron-sulfur cluster assembly accessory protein n=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016092	FeS cluster insertion protein	TIGRFAM	TIGR00049	TIGR00049	coord: 16..117 e-value: 1.1E-33 score: 113.5
IPR000361	FeS cluster biogenesis	PFAM	PF01521	Fe-S_biosyn	coord: 16..115 e-value: 6.8E-20 score: 71.3
IPR035903	HesB-like domain superfamily	GENE3D	2.60.300.12		coord: 15..119 e-value: 2.6E-33 score: 116.2
IPR035903	HesB-like domain superfamily	SUPERFAMILY	89360	HesB-like domain	coord: 16..108
None	No IPR available	PANTHER	PTHR10072	IRON-SULFUR CLUSTER ASSEMBLY PROTEIN	coord: 5..118

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-canaliculata_contig103691	contig	P-canaliculata_contig103691:181..558 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pelvetia canaliculata dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig103691.512.1	mRNA_P-canaliculata_contig103691.512.1	Pelvetia canaliculata dioecious	mRNA	P-canaliculata_contig103691 181..558 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-canaliculata_contig103691.512.1 ID=prot_P-canaliculata_contig103691.512.1|Name=mRNA_P-canaliculata_contig103691.512.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=126bp
MTANTTRTRRPRPKLVTLTDEAAARVSEILAERGEGYLRVGVKNGGCAGM
EYLMDYVTEPAKFDEVVEDKGVQIVVDAKAVLFLLGSVVDYEVDILSSKF
TFKNPQQTDACGCGESVTIIPVIEA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016092	FeS_cluster_insertion
IPR000361	FeS_biogenesis
IPR035903	HesB-like_dom_sf