prot_P-canaliculata_contig99515.24061.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig99515.24061.1
Unique Nameprot_P-canaliculata_contig99515.24061.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length254
Homology
BLAST of mRNA_P-canaliculata_contig99515.24061.1 vs. uniprot
Match: A0A5C0E433_9PROT (DUF4365 domain-containing protein n=1 Tax=Aliarcobacter cryaerophilus TaxID=28198 RepID=A0A5C0E433_9PROT)

HSP 1 Score: 73.2 bits (178), Expect = 4.120e-11
Identity = 58/245 (23.67%), Postives = 116/245 (47.35%), Query Frame = 0
Query:   10 SKKLNAVAASYHYSAANVIRTYRDESKRSCVRHYRKAVELDPEYLQKPYWWQEMGSAFFQIHRYKASVGCYSKAISLGMADETLALRADALLHAGLYSKAADGF-EIYLRHKEKLTQEAGGSEFTPGLGGWYLKSWCINTVIENLEITERPSITRSLTYTGALDDIGAMINHLKMYGIWQKNI-------WFNVAIALGKSGDLEGSLVGFVMEAMINPSDMEAQGNALSLAMNTQNAFVMGHLM 246
            ++K++   A Y+Y  AN +R    +  +     Y KA++ +  Y  + Y ++EM    + + R++ S  CY K + L     ++ L ADAL+  G Y ++ + F E + + KE +  E            W+LK   +  ++++L+I E+    +    T  + +        + Y     NI        FN+AI+     +  G++V F++ A++N  D E+  N++  A+N Q+  V+ +++
Sbjct:  349 NEKMHLGIAYYNY--ANFLRM---KDLKKSFHFYNKALKYNTHYCTEDYIFKEMAGLLWDLDRFEMSAKCYKKGLELKEDLNSIVLYADALMFQGKYLESKNKFIEYFEKKKEDIHPE------------WHLKESILGIIVDDLKIKEQKRNYKKAMNTKTIKNCNGQKIPDEEYEFIIDNIDALNPLCHFNLAISCSNEDEHFGTMVHFLISALVNRKDKESWLNSIKGALNCQSYNVIPNMI 576          
BLAST of mRNA_P-canaliculata_contig99515.24061.1 vs. uniprot
Match: X1KIJ1_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1KIJ1_9ZZZZ)

HSP 1 Score: 52.8 bits (125), Expect = 5.130e-5
Identity = 23/70 (32.86%), Postives = 38/70 (54.29%), Query Frame = 0
Query:   14 NAVAASYHYSAANVIRTYRDESKRSCVRHYRKAVELDPEYLQKPYWWQEMGSAFFQIHRYKASVGCYSKA 83
            N + A + Y+ AN  R+    + R  +++Y +A  L+P+YL + YWW E+    F +  Y  +  CY KA
Sbjct:   87 NILKAVFSYNLANSYRS--SHNVRKAIKYYMQAKRLEPDYLNRDYWWYELAGVLFMVKHYGWAESCYLKA 154          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99515.24061.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A5C0E433_9PROT4.120e-1123.67DUF4365 domain-containing protein n=1 Tax=Aliarcob... [more]
X1KIJ1_9ZZZZ5.130e-532.86Uncharacterized protein n=1 Tax=marine sediment me... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 39..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig99515contigP-canaliculata_contig99515:283..1044 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig99515.24061.1mRNA_P-canaliculata_contig99515.24061.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig99515 280..1044 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig99515.24061.1 ID=prot_P-canaliculata_contig99515.24061.1|Name=mRNA_P-canaliculata_contig99515.24061.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=254bp
MLRLADEFESKKLNAVAASYHYSAANVIRTYRDESKRSCVRHYRKAVELD
PEYLQKPYWWQEMGSAFFQIHRYKASVGCYSKAISLGMADETLALRADAL
LHAGLYSKAADGFEIYLRHKEKLTQEAGGSEFTPGLGGWYLKSWCINTVI
ENLEITERPSITRSLTYTGALDDIGAMINHLKMYGIWQKNIWFNVAIALG
KSGDLEGSLVGFVMEAMINPSDMEAQGNALSLAMNTQNAFVMGHLMDEVP
FRHG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf