prot_P-canaliculata_contig993.24044.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig993.24044.1
Unique Nameprot_P-canaliculata_contig993.24044.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length283
Homology
BLAST of mRNA_P-canaliculata_contig993.24044.1 vs. uniprot
Match: D7FWP5_ECTSI (Arrestin_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP5_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 1.460e-71
Identity = 120/223 (53.81%), Postives = 156/223 (69.96%), Query Frame = 0
Query:    1 MKETDQGGGSCEIKYTLEARLHRPGCVNFDVKGKTELVVFPMPNKT-PPTPVTMGPDTRRVKKCCCFPGGSISIGFEADRSIVGRNEVMSVVVVACNNSSSDVNDLEIEIRQETRWYARSHGDLRKRTIASVKVPGSQLGELLRAPEKGHERGRSQAAIADAAQCDLQDMLKAGAGTKYELVVPSNCHTSTQTSLIVVRHALVVELKTPSCITSPEVWMPLRV 222
            M+E    GGSCEI Y  EARLHRPG ++FD KGK +L V   P++    TPV +GP T+ VKK CCF  GS+SIGF+AD S VG NE + + VVA N+SS++V  + +EI+Q + W+AR + + + RT+A+V VPG+QL    RA EKG++RGRS A IAD A+ DLQ+ L AGAGT Y+L+VP N   + Q  LI V+H L V LKTP CI+SP+VW PL V
Sbjct:  117 MEENGSQGGSCEIFYGFEARLHRPGMLHFDAKGKAKLTVLSKPHEAGAATPVLVGPATQTVKKFCCFKSGSMSIGFQADHSEVGLNETVGLTVVARNDSSAEVKTMHVEIKQVSTWFARGYKESKTRTVAAVVVPGTQL----RASEKGNQRGRSSAVIADTARADLQEQLGAGAGTHYDLLVPGNSLLTLQADLIEVKHTLSVMLKTPHCISSPDVWTPLLV 335          
BLAST of mRNA_P-canaliculata_contig993.24044.1 vs. uniprot
Match: A0A6H5KH15_9PHAE (Arrestin_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH15_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.360e-61
Identity = 112/225 (49.78%), Postives = 146/225 (64.89%), Query Frame = 0
Query:    1 MKETDQGG-GSCEIKYTLEARLHRPGCVNFDVKGKTELVVFPMPNKTPPT-PVTMGPDTRRVKKCCCFPGGSISIGFEADRSIVGRNEVMSVVVVACNNSSSDVNDLEIEIRQETRWYARSHGDLRKRTIASVKVPGSQLGELLRAPEKGHERGRSQAAIADAAQCDLQDMLKAGAGTKYELVVPSNCHTSTQTSLIVVRHALVVELKTPSCITSPEVWMPLRVQ 223
            MKE  QGG GSC I Y   ARLHRPG +NFD KGK +L V   P +T  + PV  GP  + VKKC C   GS+S+GF+ADRS+VG NE + V+VVA N+SS  V +L +E+ QET W A   GD+  R + SV VPG++LG    A E G +RG+S AAIAD A+ DL+  L +GAGT++EL VP++   +  +  I VRH L V ++ P C+  P+VW  L VQ
Sbjct:  116 MKE--QGGNGSCAIAYGFRARLHRPGLLNFDAKGKVQLKVLGKPEETSASSPVVAGPAVKAVKKCYCLQSGSMSLGFQADRSVVGLNESVGVIVVARNDSSVAVKNLRVELVQETSWTANGAGDVSTRVVKSVVVPGAELG----AAEFGGQRGQSAAAIADTARADLERQLASGAGTRHELTVPADTSITLNSETIQVRHVLTVRIQGPRCVECPDVWTSLHVQ 334          
BLAST of mRNA_P-canaliculata_contig993.24044.1 vs. uniprot
Match: D7FWP6_ECTSI (Arrestin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP6_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 3.700e-47
Identity = 98/215 (45.58%), Postives = 124/215 (57.67%), Query Frame = 0
Query:    1 MKETDQGGGSCEIKYTLEARLHRPGCVNFDVKGKTELVVFPMPNKTPPT-PVTMGPDTRRVKKCCCFPGGS-----------------------------ISIGFEADRSIVGRNEVMSVVVVACNNSSSDVNDLEIEIRQETRWYARSHGDLRKRTIASVKVPGSQLGELLRAPEKGHERGRSQAAIADAAQCDLQDMLKAGAGTKYELVVPSN 185
            MKE   GGGSC I Y   ARLHRPG +NFD KGK +L V   P +T  + PV  GP+   VKKC C   GS                             +S+GF+ADRS+VG NE + + VVA N+SS  V +L IE+ QET W A   GD+  R + SV VPG++LG +    E G +RGRS AAIAD A+ DL+  L +GAGT+YEL VP++
Sbjct:  116 MKEQG-GGGSCAIAYGFRARLHRPGLLNFDAKGKVQLKVLGKPQETSASSPVVAGPEVMAVKKCYCLQSGSCVAESRSTMDLGHRHARWQHGAPTNSHESMSLGFQADRSVVGLNESVGITVVARNDSSVAVKNLRIELVQETSWTANGAGDVSTRAVKSVVVPGAELGAV----EFGGQRGRSAAAIADTARADLESQLASGAGTRYELTVPAD 325          
BLAST of mRNA_P-canaliculata_contig993.24044.1 vs. uniprot
Match: A0A7S4EWN0_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EWN0_CHRCT)

HSP 1 Score: 103 bits (258), Expect = 2.220e-21
Identity = 62/217 (28.57%), Postives = 111/217 (51.15%), Query Frame = 0
Query:    7 GGGSCEIKYTLEARLHRPGCVNFDVKGKTELVVFPMPNKTPPTPVTMGPDTRRVKKCCCFPGGSISIGFEADRSIVGRNEVMSVVVVACNNSSSDVNDLEIEIRQETRWYARSHGDLRKRTIASVKVPGSQLGELLRAPEKGHERGRSQAAIADAAQCDLQDMLKAGAGTKYELV-VPSNCHTSTQTSLIVVRHALVVELKTPSCITSPEVWMPLRV 222
            GGG C+IKY + A+L RPG +NFD+K     +V   P      P  + P   +V  C C   G++++G   D +++GR E + V +   N+S++ V+ +   + +   W+A  H +  KR IA V+   S +  + +  +   +  R +AA A  +Q   +   +   G +  L+ + ++   S   +++ VRH L V L+T  C+T+P V   +R+
Sbjct:  139 GGGDCQIKYYINAKLTRPGMMNFDLKTTRPFMVSSTPMPPEAVPAFLQPSETKVSTCWCLGKGAMTLGATLDDTLIGRGESVRVGLALKNDSTATVDKISACVTEFVNWHAGGHSNNHKRKIAQVEFDLSSIHGVDKLDQAALKAVR-EAAAAGLSQTYEELYQQLAHGKQRSLLSISADARDSYAGAVLSVRHQLEVRLETACCVTNPSVQTIVRI 354          
BLAST of mRNA_P-canaliculata_contig993.24044.1 vs. uniprot
Match: A0A7S3RIZ2_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RIZ2_9SPIT)

HSP 1 Score: 75.1 bits (183), Expect = 1.090e-11
Identity = 44/170 (25.88%), Postives = 82/170 (48.24%), Query Frame = 0
Query:   59 RVKKCCCFPGGSISIGFEADRSIVGRNEVMSVVVVACNNSSSDVNDLEIEIRQETRWYARSHGDLRKRTIASVKVPGSQLGELLRAPEKGHERGRSQAAIAD--AAQCDLQDMLKAGAGTKYELVVPSNCHTST----QTSLIVVRHALVVELKTPSCITSPEVWMPLRV 222
            +V  CCC P G +++    D + +GR E + + V   N SSS    +  ++R+   W+A  H + + RTIA  +   + +  L      G +      AI +   ++ ++  ++      + E   P  C+ +     Q  ++ VRH + V +KTP C+T PE+ +P+R+
Sbjct:    1 QVNMCCCIPQGQLTLAASIDDTCMGRGEALDIAVAVNNESSSIPERMYADVREYVSWHAGGHSNHQSRTIAYAEYNPADVEGL------GRKSKHELRAIKENPGSRMEMLALMHRSLQNR-EARQPLRCNPTARDTYQGRVLSVRHVMAVRVKTPYCVTDPELALPIRI 163          
BLAST of mRNA_P-canaliculata_contig993.24044.1 vs. uniprot
Match: A0A1E7EZE8_9STRA (Arrestin_N domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EZE8_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 6.060e-5
Identity = 34/111 (30.63%), Postives = 57/111 (51.35%), Query Frame = 0
Query:    3 ETDQGGGSCEIKYTLEARLHRPGCVNFDVKGKTELVVFPMPNKTPPTPVTMGPDTRRVKKCCCFPGGSISIGFEADRSIVGRNEVMSVVVVACNNSS-SDVNDLEIEIRQE 112
            E +  GG  +I Y ++  L   G V +D   +  + V    +     P    PD ++VK CCCF  GSIS+G   D + + + +  +V+  AC N S +DV D+  E++++
Sbjct:  131 EINAKGGYAKISYKIKMALKGSG-VFWDYTAEASVYVTSA-SIARYVPFDGPPDEQKVKSCCCFGRGSISVGASVDNTSLAKGQ-QAVISYACRNQSRNDVKDIYAELQEQ 238          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig993.24044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FWP5_ECTSI1.460e-7153.81Arrestin_N domain-containing protein n=2 Tax=Ectoc... [more]
A0A6H5KH15_9PHAE1.360e-6149.78Arrestin_C domain-containing protein n=1 Tax=Ectoc... [more]
D7FWP6_ECTSI3.700e-4745.58Arrestin_N domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S4EWN0_CHRCT2.220e-2128.57Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A7S3RIZ2_9SPIT1.090e-1125.88Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A1E7EZE8_9STRA6.060e-530.63Arrestin_N domain-containing protein n=1 Tax=Fragi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011022Arrestin C-terminal-like domainSMARTSM01017Arrestin_C_2coord: 67..225
e-value: 6.8E-4
score: 28.9
IPR014752Arrestin, C-terminalGENE3D2.60.40.640coord: 50..142
e-value: 1.2E-6
score: 30.2
NoneNo IPR availablePANTHERPTHR11188ARRESTIN DOMAIN CONTAINING PROTEINcoord: 10..257
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 59..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig993contigP-canaliculata_contig993:19282..20744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig993.24044.1mRNA_P-canaliculata_contig993.24044.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig993 18719..20964 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig993.24044.1 ID=prot_P-canaliculata_contig993.24044.1|Name=mRNA_P-canaliculata_contig993.24044.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=283bp
MKETDQGGGSCEIKYTLEARLHRPGCVNFDVKGKTELVVFPMPNKTPPTP
VTMGPDTRRVKKCCCFPGGSISIGFEADRSIVGRNEVMSVVVVACNNSSS
DVNDLEIEIRQETRWYARSHGDLRKRTIASVKVPGSQLGELLRAPEKGHE
RGRSQAAIADAAQCDLQDMLKAGAGTKYELVVPSNCHTSTQTSLIVVRHA
LVVELKTPSCITSPEVWMPLRVQQNVGRGVTEEQTPYAAVFEGGAIGDST
SLSVHYSSISRGCTRSMSDPVSPDAKLNSPYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011022Arrestin_C-like
IPR014752Arrestin_C
IPR014756Ig_E-set