prot_P-canaliculata_contig9873.23982.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9873.23982.1
Unique Nameprot_P-canaliculata_contig9873.23982.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length584
Homology
BLAST of mRNA_P-canaliculata_contig9873.23982.1 vs. uniprot
Match: A0A6H5JFY4_9PHAE (zf-C2HC5 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY4_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 1.050e-101
Identity = 294/627 (46.89%), Postives = 338/627 (53.91%), Query Frame = 0
Query:    1 MGDTRAWFEGELRRMLGFDEVEEIARFALDSYSASQAVELRQYLEQFLGQSHEVRKLCDELSSRRSAAAPLSASKTGSARRQHASAGEDFWGAGGSSGAATRAATAPGGG-VRGQEHERKPAAKGRAKGKAYKKST-EEDFWGGGTTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGKLPTKPEPTGASSKSSARQEHSMSSAAASAGKLRGARAKGRGGKVAA------------------------------GAQTPGPAKSVPSATNVSEQTKKTATWSGVTCLCMGKNHDAITNCTVCGKIACVEEGGFGCSFCGSALPVTGREPRRSGESKRGDSEGSTVAAVETADPTQSAALKEALGRKDKLLLFDRTSASRTRVLDDQGDYFTSHNWLSREEREEEEAKEKAHRDEAAQRRGARRQVKLSIDIMGRRVIETKEPG------DGQAGGQAQDENEQGERLGAAAEEIARVGGVGDDTGGAFAGVDPRNGPRKADQDPA---NHWPSVENTGLRGRAKEVYDVMRANLEKQGRR-RPGGNSTKR-GGFRVA----EKSRVSLWRVQHDVDSDDVVRQNQVGGSNRGVGVGHEEIDFERFGPIDEL 580
            M  TRAWFEGELRRMLGFDEVEEIARFALDS+  SQ VELRQYLEQFLGQS   + L                                               TA GG               G+ +GK Y+K+  EEDFWGGGTT            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            G ++              A+ G + G R   +    ++                               A+T    +++P+   V E       WSGVTCLCMGK HD +TNCT CGKIACV+EGGFGCSFCG  LP TGREPR    +  G  +G+  AA        SAALKEAL RKD+LLLFDRTSASRTRVLDDQGDYFTSHNWLS+ ERE+ EA+EKA RD+AA RRGARRQVK+SIDIMGRRVIET  PG      DG  G    DE+   +  G + +  +                       +AD   A   N   S+ENTGLRGRAKEVYDVMRANL+K+ RR RPGG   K   G R+     E SRV+LWRVQHDVDSDD++RQ+Q  G             F +F P DEL
Sbjct:    1 MAKTRAWFEGELRRMLGFDEVEEIARFALDSFPVSQPVELRQYLEQFLGQSRGGKSLL----------------------------------------------TAEGGNNXXXXXXXXXXXXXGKGRGKVYQKAAVEEDFWGGGTTSGRVKPASAPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAGGAT------------GTATKGDVGGGRVSSKQPLASSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKTTALPETLPAPAPVPE-------WSGVTCLCMGKTHDVVTNCTDCGKIACVKEGGFGCSFCGCRLPTTGREPR---SATSGGVDGAAGAAA-----PHSAALKEALERKDRLLLFDRTSASRTRVLDDQGDYFTSHNWLSQREREKGEAEEKARRDDAASRRGARRQVKMSIDIMGRRVIETH-PGEDGGLADGGGGEXXADEDASRKTQGVSLDFGSXXXXXXXXXXXXXXXXXXXXXAEEADTPGAGNGNQRLSLENTGLRGRAKEVYDVMRANLDKKSRRQRPGGAGGKAVAGSRIVGAVPEASRVNLWRVQHDVDSDDLLRQSQASGXXXXXXX-XXXXGFGKFEPADEL 552          
BLAST of mRNA_P-canaliculata_contig9873.23982.1 vs. uniprot
Match: D7FU14_ECTSI (Similar to thyroid hormone receptor interactor 4 isoform 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU14_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.010e-90
Identity = 187/336 (55.65%), Postives = 220/336 (65.48%), Query Frame = 0
Query:  273 MGKNHDAITNCTVCGKIACVEEGGFGCSFCGSALPVTGREPRRSGESKRGDSEGSTVAAVETADPTQSAALKEALGRKDKLLLFDRTSASRTRVLDDQGDYFTSHNWLSREEREEEEAKEKAHRDEAAQRRGARRQVKLSIDIMGRRVIETKEPGDGQA---GGQAQDENE-----QGERL---------GAAAEEIARV---GGVGDDTGGAFAGVDPRNGPRKADQDPANHWPSVENTGLRGRAKEVYDVMRANLEKQGRRR-PGGNSTKR-GGFRVA----EKSRVSLWRVQHDVDSDDVVRQNQVGGSNRGVGVGHEEIDFERFGPIDELGC 582
            MGK HD +TNCT CGKIACV+EGGFGCSFCG  LP TGREPR +       + G+T          QSAALKEAL RKD+LLLFDRTSASRTRVLDDQGDYFTSHNWLS+ ERE+ EA+EK  RD+AA RRGARRQVK+SIDIMGRRVIET++PG+G+A   GG+ + +++     QG  L         G AA   A     G +G++ G + AG    NG         N   S+ENTGLRGRAKEVYDVMRANL+K+ RRR P G   K   G R+     E SRV+LWRVQHDVDSDD++RQ+Q  G             F +F P DEL C
Sbjct:    1 MGKTHDVVTNCTDCGKIACVKEGGFGCSFCGCRLPTTGREPRSAASGGVDGAAGATA--------PQSAALKEALERKDRLLLFDRTSASRTRVLDDQGDYFTSHNWLSQREREKGEAEEKVRRDDAASRRGARRQVKMSIDIMGRRVIETQDPGEGRADGGGGEGEADDDASKKTQGVSLDFGSSSAAGGGAAGSSAXXXXXGSIGEEAGTSGAG----NG---------NQRLSLENTGLRGRAKEVYDVMRANLDKKSRRRRPRGAGGKAVAGSRIVGAVPETSRVNLWRVQHDVDSDDLLRQSQASGXXXXXXX-XXXXGFGKFEPADELAC 314          
BLAST of mRNA_P-canaliculata_contig9873.23982.1 vs. uniprot
Match: UPI00077AD339 (activating signal cointegrator 1-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077AD339)

HSP 1 Score: 100 bits (248), Expect = 1.400e-18
Identity = 65/164 (39.63%), Postives = 100/164 (60.98%), Query Frame = 0
Query:  270 CLCMGKNHDAITNCTVCGKIACVEEGGFGCSFCGSALPVTGREPRRSGESKRGDS--EGSTVAAVETA-DPTQSAA---LKEALGRKDKLLLFDRTSASRTRVLDDQGDYFTS--HNWLSREEREEEEAKEKAHRDEAAQRRGARRQVKLSIDIMGRRVIETKE 425
            C C+G+ H  I NC  CG+I C++EG   C FCG+ +  T  +   + +SK+     E     ++E A + T S A   L+EA+  K+KL+ FD++   RT+V+DD+ DYF S  + WLS+ ER+    KE+  R++   R G+RRQ+K+++D  GRRVI+ KE
Sbjct:  134 CECLGQKHQLINNCIECGRIVCMQEGSGPCYFCGALVCSTEEKEILAQKSKKSQKLYEKLLTRSIEDASEETLSVADKGLQEAIAHKNKLIEFDKSGVRRTKVIDDECDYFASDSNRWLSKRERDTLRKKEEDLREK---RHGSRRQMKVTLDFAGRRVIDEKE 294          
BLAST of mRNA_P-canaliculata_contig9873.23982.1 vs. uniprot
Match: A7RPW2_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RPW2_NEMVE)

HSP 1 Score: 98.2 bits (243), Expect = 5.710e-18
Identity = 60/167 (35.93%), Postives = 99/167 (59.28%), Query Frame = 0
Query:  270 CLCMGKNHDAITNCTVCGKIACVEEGGFGCSFCGSAL------PVTGREPRRSGE------SKRGDSEGSTVAAVETADPTQSAALKEALGRKDKLLLFDRTSASRTRVLDDQGDYFTS--HNWLSREEREEEEAKEKAHRDEAAQRRGARRQVKLSIDIMGRRVIE 422
            C C+G+ H  + NCT CG+I C +EG   C FCG+ +       +  RE ++S +      S+    E  +   + T++      L +A+  K+KLL +D+TS  RT+V+DD+ DYF++  + WLS++E+E+   KE+  R   A+R G+RR +K+++D  GRRV+E
Sbjct:  125 CECLGQKHGLVNNCTSCGRIVCDQEGAGPCYFCGALVCSRAEQEIIARESKKSAKLLKQLMSQEFSEEVKSQGRMGTSNGKDLQGLDKAIAHKNKLLEYDKTSVCRTKVIDDECDYFSTDGNKWLSKKEKEQLTVKEEELR---AKRHGSRRDMKITLDFAGRRVVE 288          
BLAST of mRNA_P-canaliculata_contig9873.23982.1 vs. uniprot
Match: A0A0C9R7G9_9HYME (Trip4_1 protein n=2 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9R7G9_9HYME)

HSP 1 Score: 97.1 bits (240), Expect = 1.240e-17
Identity = 62/160 (38.75%), Postives = 90/160 (56.25%), Query Frame = 0
Query:  268 VTCLCMGKNHDAITNCTVCGKIACVEEGGFGCSFCGSALPVTGREPRRSGESKRGDSEGSTVAAVETADPTQSAALKEALGRKDKLLLFDRTSASRTRVLDDQGDYFTSHN--WLSREEREEEEAKEKAHRDEAAQRRGARRQVKLSIDIMGRRVIETKE 425
            V C C  K H  I NC  CG+I C +EG   C FCG  +    ++   S  SK  D+  + +         +    K AL ++DKLL FDR SA RTRV+DD+ DY+ S N  WLS+EER E E +E   ++   ++ G+R + K ++DI GR+V+E ++
Sbjct:  132 VKCDCEAKTHKLINNCLTCGRIVCEQEGAGPCFFCGELVCTPNQQNVLSTNSKNSDNLYNKL--------MEQKPSKAALKQRDKLLEFDRNSAKRTRVIDDESDYYQSSNSVWLSKEERAEMERREAEMKE---RKYGSRLEKKFTVDIFGRQVVEEED 280          
BLAST of mRNA_P-canaliculata_contig9873.23982.1 vs. uniprot
Match: E9GBD9_DAPPU (ASCH domain-containing protein n=4 Tax=Daphnia TaxID=6668 RepID=E9GBD9_DAPPU)

HSP 1 Score: 92.8 bits (229), Expect = 2.890e-16
Identity = 63/169 (37.28%), Postives = 91/169 (53.85%), Query Frame = 0
Query:  258 QTKKTATWSGV-TCLCMGKNHDAITNCTVCGKIACVEEGGFGCSFCGSALPVTGREPR-RSGESKRGDSEGSTVAAVETADPTQSAALKEALGRKDKLLLFDRTSASRTRVLDDQGDYFT--SHNWLSREEREEEEAKEKAHRDEAAQRRGARRQVKLSIDIMGRRVIE 422
            Q K+T T  G   C C    H  + NC  CG++ C +EG   C FC   +    +E   +S  +    ++ S    ++   P    A   A+  K+KLL FDRTS  RTRV+DD+ DYF   S+ WL+ ++R+    KEK  RD    R G+RRQ+K+++D  GR+VIE
Sbjct:  116 QAKETITLPGQHKCECQASKHSLVRNCLECGRVICAQEGPGPCVFCTENMSACEKEALLQSNNAPAQRTKQSGRRFLDGTAPLPDKAFTTAMAHKEKLLEFDRTSEHRTRVIDDESDYFNADSNKWLNPKQRDALRTKEKELRDS---RHGSRRQIKVTLDFAGRQVIE 281          
BLAST of mRNA_P-canaliculata_contig9873.23982.1 vs. uniprot
Match: A0A6P8GZP8_ACTTE (activating signal cointegrator 1-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8GZP8_ACTTE)

HSP 1 Score: 92.4 bits (228), Expect = 4.200e-16
Identity = 60/166 (36.14%), Postives = 92/166 (55.42%), Query Frame = 0
Query:  270 CLCMGKNHDAITNCTVCGKIACVEEGGFGCSFCGSALPVTGREPRRSGESKRGDSEGSTVAAVETADPTQSA------------ALKEALGRKDKLLLFDRTSASRTRVLDDQGDYF-TSHNWLSREEREEEEAKEKAHRDEAAQRRGARRQVKLSIDIMGRRVIE 422
            C C+ + H  I NCT CG+I C +EG   C FCGS +    ++   + +SK+       +   + +D  +                + A+  K+KLL FD+TSA RT V+DD+ DYF T+  WLS EER + E KE+  R++   R G+RR +K+++D  GR+V+E
Sbjct:  134 CECLAQKHSLINNCTSCGRIVCEQEGEGPCYFCGSLVCTKAQKEILARDSKKSAKLLKQLMQQDFSDDVKKLQKXKNMSAQELEGYQRAVEHKNKLLEFDKTSARRTHVIDDEADYFSTNSKWLSTEERTKLEKKEEELREK---RHGSRRNMKVTLDFAGRKVVE 296          
BLAST of mRNA_P-canaliculata_contig9873.23982.1 vs. uniprot
Match: A0A0N8D2Q7_9CRUS (Activating signal cointegrator n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A0N8D2Q7_9CRUS)

HSP 1 Score: 91.3 bits (225), Expect = 9.160e-16
Identity = 62/164 (37.80%), Postives = 91/164 (55.49%), Query Frame = 0
Query:  270 CLCMGKNHDAITNCTVCGKIACVEEGGFGCSFCGSALPVTGRE---------PRRSGESKRGDSEGSTVAAVETADPTQSAALKEALGRKDKLLLFDRTSASRTRVLDDQGDYFTS--HNWLSREEREEEEAKEKAHRDEAAQRRGARRQVKLSIDIMGRRVIE 422
            C C    H  I NC  CG++ C +EG   C FC   +P   +E         P+RS +S +G  +G T A  + A  T       A+  K+KLL FDRTS  RTRV+DD+ DYF +  + WL+ ++R+   +KE+  R+    R G+RR +K+++D  GR+VIE
Sbjct:  131 CECQASKHSLIRNCLECGRVICSQEGPGPCIFCTENMPANEKETYSQANKPAPQRSKQSGKGFLDG-TAALPDKAFTT-------AMAHKEKLLEFDRTSEHRTRVIDDESDYFNADGNKWLNPKQRDALRSKERELRES---RHGSRRGMKVTLDFAGRQVIE 283          
BLAST of mRNA_P-canaliculata_contig9873.23982.1 vs. uniprot
Match: UPI00106C9987 (activating signal cointegrator 1-like n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C9987)

HSP 1 Score: 90.9 bits (224), Expect = 1.270e-15
Identity = 59/158 (37.34%), Postives = 88/158 (55.70%), Query Frame = 0
Query:  270 CLCMGKNHDAITNCTVCGKIACVEEGGFGCSFCGSALPVTGREPRRSGESKRGDSEGSTVAAVETADPTQSAALK--EALGRKDKLLLFDRTSASRTRVLDDQGDYFTSHN-WLSREEREEEEAKEKAHRDEAAQRRGARRQVKLSIDIMGRRVIETK 424
            C C+G+ H  + NC  CG+I C +EG   C FCG  +         +  SKRG      +     A  ++   LK  +A   KD+LL +DRTS  RT+V+DD+ DYF S + WLS++ER+    KEK  + +   + G+RR  K+++D  GR++IE K
Sbjct:  137 CECLGQKHSLVNNCLQCGRIVCEQEGSGPCYFCGEVVCTAEEREVLAKNSKRGQKLKEKLLESWNAKASEDEELKRRKATELKDRLLEYDRTSVRRTKVIDDESDYFASDSKWLSKKERKI--LKEKEDKLQKL-KHGSRRDKKVTLDFAGRKIIEEK 291          
BLAST of mRNA_P-canaliculata_contig9873.23982.1 vs. uniprot
Match: UPI0001CB9C0C (activating signal cointegrator 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB9C0C)

HSP 1 Score: 90.5 bits (223), Expect = 2.070e-15
Identity = 62/170 (36.47%), Postives = 92/170 (54.12%), Query Frame = 0
Query:  270 CLCMGKNHDAITNCTVCGKIACVEEGGFGCSFCGSA------LPVTGREPRRSGESKR---GDS--EGSTVAAVETADPTQSAALKEALGRKDKLLLFDRTSASRTRVLDDQGDYFTS--HNWLSREEREEEEAKEKAHRDEAAQRRGARRQVKLSIDIMGRRVIETKEP 426
            C C    H  + NC  CG++ C +EG   C FCGS       L +  R   +S +  R   GD   +   +  VE       + L +A+  K+KL+ +D+TSA RT V+DD+ DYF +  + WLS++ERE  + +E   R+   QR G+RR  K+++D  GR+VIE  EP
Sbjct:  178 CECQAHRHRLVNNCIKCGRVVCDQEGAGPCFFCGSLVCSSEQLEILARNSHKSEKLMRKLMGDVIVKDKALGTVEKDSSKLCSGLDKAIMHKNKLIEYDKTSARRTHVIDDESDYFATDTNRWLSKKEREVLKNREDELRE---QRHGSRRGKKITLDFAGRKVIEDNEP 344          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9873.23982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFY4_9PHAE1.050e-10146.89zf-C2HC5 domain-containing protein n=1 Tax=Ectocar... [more]
D7FU14_ECTSI1.010e-9055.65Similar to thyroid hormone receptor interactor 4 i... [more]
UPI00077AD3391.400e-1839.63activating signal cointegrator 1-like n=2 Tax=Acro... [more]
A7RPW2_NEMVE5.710e-1835.93Predicted protein n=2 Tax=Nematostella vectensis T... [more]
A0A0C9R7G9_9HYME1.240e-1738.75Trip4_1 protein n=2 Tax=Fopius arisanus TaxID=6483... [more]
E9GBD9_DAPPU2.890e-1637.28ASCH domain-containing protein n=4 Tax=Daphnia Tax... [more]
A0A6P8GZP8_ACTTE4.200e-1636.14activating signal cointegrator 1-like n=1 Tax=Acti... [more]
A0A0N8D2Q7_9CRUS9.160e-1637.80Activating signal cointegrator n=2 Tax=Daphnia mag... [more]
UPI00106C99871.270e-1537.34activating signal cointegrator 1-like n=2 Tax=Dend... [more]
UPI0001CB9C0C2.070e-1536.47activating signal cointegrator 1-like n=1 Tax=Sacc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 380..400
NoneNo IPR availablePANTHERPTHR12963:SF4TRANSCRIPTION REGULATOR/ ZINC ION BINDING PROTEINcoord: 7..425
IPR009349Zinc finger, C2HC5-typePFAMPF06221zf-C2HC5coord: 269..306
e-value: 4.1E-8
score: 33.1
IPR039128Activating signal cointegrator 1-likePANTHERPTHR12963THYROID RECEPTOR INTERACTING PROTEIN RELATEDcoord: 7..425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9873contigP-canaliculata_contig9873:3264..6664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9873.23982.1mRNA_P-canaliculata_contig9873.23982.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9873 2241..6933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9873.23982.1 ID=prot_P-canaliculata_contig9873.23982.1|Name=mRNA_P-canaliculata_contig9873.23982.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=584bp
MGDTRAWFEGELRRMLGFDEVEEIARFALDSYSASQAVELRQYLEQFLGQ
SHEVRKLCDELSSRRSAAAPLSASKTGSARRQHASAGEDFWGAGGSSGAA
TRAATAPGGGVRGQEHERKPAAKGRAKGKAYKKSTEEDFWGGGTTVGTTS
GGQSSSMKSATNRPTPAAAPAPRSARNSGGSQKGSAGGGSGKLPTKPEPT
GASSKSSARQEHSMSSAAASAGKLRGARAKGRGGKVAAGAQTPGPAKSVP
SATNVSEQTKKTATWSGVTCLCMGKNHDAITNCTVCGKIACVEEGGFGCS
FCGSALPVTGREPRRSGESKRGDSEGSTVAAVETADPTQSAALKEALGRK
DKLLLFDRTSASRTRVLDDQGDYFTSHNWLSREEREEEEAKEKAHRDEAA
QRRGARRQVKLSIDIMGRRVIETKEPGDGQAGGQAQDENEQGERLGAAAE
EIARVGGVGDDTGGAFAGVDPRNGPRKADQDPANHWPSVENTGLRGRAKE
VYDVMRANLEKQGRRRPGGNSTKRGGFRVAEKSRVSLWRVQHDVDSDDVV
RQNQVGGSNRGVGVGHEEIDFERFGPIDELGCN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009349Znf_C2HC5
IPR039128TRIP4-like