prot_P-canaliculata_contig98693.23978.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig98693.23978.1
Unique Nameprot_P-canaliculata_contig98693.23978.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length207
Homology
BLAST of mRNA_P-canaliculata_contig98693.23978.1 vs. uniprot
Match: A0A6H5KWJ9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWJ9_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 6.420e-28
Identity = 87/210 (41.43%), Postives = 114/210 (54.29%), Query Frame = 0
Query:    9 GLRFWVAGHSLGGAVAISVILFLHDIPFTAKYIEDYENKFDLQPNHSTTFNRKVADPWSA--ASKKGSGRPYELSGGHVFNPGASLDVNDNLITSFLGVGGGGLFGAQTFGGMAMAGIFG---VILVFVG-----LIEAFEEHTYGGTDSRPDKGVTTHHILGDLLSCSYRIGKEKSYMPKSKIAF-LVYWWLP-KNFKSWGPHSMENFV 206
            GLRF V GHSLGG VA+ V++ LHDIP TA+           +PN  T + ++V   W+A  A+  G+  PYEL GGH+FNPGA   +   +       GG  + G    GG A+AG      +  V VG      I  +  HT   +D   DK VTTHHI+GD++S  +R+G EK+YMPK K A  L     P K  K WG HS+ NF+
Sbjct:  179 GLRFSVTGHSLGGTVAMGVMVLLHDIPTTAR----------RRPN-DTRYQQQVLGAWNAERANWSGAAAPYELVGGHIFNPGAWPGLVGPVA------GGSAVAGFWLTGGFAVAGAAATAAMCAVTVGSGCVLAIYLYRSHTERLSDP-VDKRVTTHHIIGDVVSGFFRLGTEKNYMPKDKRARRLATACSPGKIGKEWGCHSIANFL 370          
BLAST of mRNA_P-canaliculata_contig98693.23978.1 vs. uniprot
Match: D7FQN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN2_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.420e-12
Identity = 54/177 (30.51%), Postives = 84/177 (47.46%), Query Frame = 0
Query:    6 DKGGLRFWVAGHSLGGAVAISVILFLHDIPFTAKYIEDYENKFDLQPNHSTTFNRKVADPWSA-ASKKGSGRPYELSGGHVFNPGAS---LDVNDNLITSFLGVGGGGLFGAQTFGGMAMAGIFGVILVFVGLIEAFEEHTYGGTDSRPDKGVTTHHILGDLLSCSYRIGKEKSYMP 178
            D   L+FWV GHSLGG+ A+ V+L L+D    A  +E        +      +  K+ D      ++  S RPYEL GG +FNPG+    + +++  +  F      GL     +  ++  G+F             ++    G   R D  V  HH+LGD +S ++R+GKE+SY P
Sbjct:  253 DTTCLKFWVTGHSLGGSTAMGVMLLLNDPVAMAATLEANAKTHKSRQQFLEMYREKIVDXXXXXVAEIYSNRPYELVGGDIFNPGSPPRCILLSNPCVCLF------GLLSLPAYI-ISRCGLF--------CYRCCKQSRQHGP--RADLLVNNHHVLGDTISMTFRMGKEQSYWP 412          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98693.23978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWJ9_9PHAE6.420e-2841.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FQN2_ECTSI1.420e-1230.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
IPR029058Alpha/Beta hydrolase foldSUPERFAMILY53474alpha/beta-Hydrolasescoord: 7..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig98693contigP-canaliculata_contig98693:358..1044 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig98693.23978.1mRNA_P-canaliculata_contig98693.23978.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig98693 358..1044 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig98693.23978.1 ID=prot_P-canaliculata_contig98693.23978.1|Name=mRNA_P-canaliculata_contig98693.23978.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=207bp
MLFLNDKGGLRFWVAGHSLGGAVAISVILFLHDIPFTAKYIEDYENKFDL
QPNHSTTFNRKVADPWSAASKKGSGRPYELSGGHVFNPGASLDVNDNLIT
SFLGVGGGGLFGAQTFGGMAMAGIFGVILVFVGLIEAFEEHTYGGTDSRP
DKGVTTHHILGDLLSCSYRIGKEKSYMPKSKIAFLVYWWLPKNFKSWGPH
SMENFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase