prot_P-canaliculata_contig9867.23976.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9867.23976.1
Unique Nameprot_P-canaliculata_contig9867.23976.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length227
Homology
BLAST of mRNA_P-canaliculata_contig9867.23976.1 vs. uniprot
Match: D7FP06_ECTSI (Chalcone Isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP06_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 2.110e-105
Identity = 164/218 (75.23%), Postives = 184/218 (84.40%), Query Frame = 0
Query:   12 GAHCLLGVTPT---ARADVAERATKISFKDKVSLPGGGQSSLMGTGVRAKKFGPMAVNVYAVGLYVDEKEAASELATHKGEDADFLGKNEGFFSRVAKSKFQKTLVLKMAREVGTEKMVSALAESVKPRMSGSKETVDTFQDILSEAMSKEGAAKKGMEFGFVCKPDALCVSVNGKEAGTINSGPLSSAMVNVYLDRNAVSPAARKDFASGVASLLVR 226
            GA  LL   P    ARADV ERATKISF++KVSLPGG  SSLMGTGVR KK GP  V VYAVGLYVDEK AA EL  HKGED + LGKN+GFF+RVAKS F+KT+VLKMAREVGTEKMVSALAESVKPR+SGSK+ +D+FQDIL +A+ KEGAAKKGM+FGFVCKP ALCVSVNGK+AGTI SGPLSSAMV+VYL + AVSP A+K FA+GVA+LL R
Sbjct:   15 GALLLLLAAPQNLCARADVTERATKISFREKVSLPGGSGSSLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGESLGKNDGFFTRVAKSNFEKTMVLKMAREVGTEKMVSALAESVKPRISGSKKPLDSFQDILLKAVGKEGAAKKGMQFGFVCKPGALCVSVNGKDAGTIKSGPLSSAMVDVYLGKKAVSPGAKKAFATGVAALLER 232          
BLAST of mRNA_P-canaliculata_contig9867.23976.1 vs. uniprot
Match: A0A835Z9G1_9STRA (Chalcone isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G1_9STRA)

HSP 1 Score: 223 bits (567), Expect = 3.530e-70
Identity = 116/202 (57.43%), Postives = 149/202 (73.76%), Query Frame = 0
Query:   25 ADVAERATKISFKDKVSLPGGGQS-SLMGTGVRAKKFGPMAVNVYAVGLYVDEKEAASELATHKGEDADFLGKNEGFFSRVAKSKFQKTLVLKMAREVGTEKMVSALAESVKPRMS-GSKETVDTFQDILSEAMSKEGAAKKGMEFGFVCKPDALCVSVNGKEAGTINSGPLSSAMVNVYLDRNAVSPAARKDFASGVASLL 224
            ADV E AT ISFKD + LPG   + SL GTGVR KK GP A  VYAVG+YVD  +A SEL+ H   ++  L K++ FF     + F+KTLVLKMAR+VG EKMV+ALAESVKPR++ G    ++ FQ +L +A++KEGAA KGM+FGFVCKP +LCVS++GK AGTINS  L SAM++VYL ++AVSP A+  FA G++S+ 
Sbjct:   17 ADVKEHATGISFKDTLKLPGASTAGSLAGTGVRVKKIGPAAFKVYAVGMYVDSAKARSELSKHSSTESRALSKSDAFFKDARSASFEKTLVLKMARKVGAEKMVNALAESVKPRLAPGGDAALEEFQTVLLDAVTKEGAANKGMQFGFVCKPGSLCVSIDGKTAGTINSEQLRSAMLDVYLGKDAVSPGAKTSFAEGMSSMF 218          
BLAST of mRNA_P-canaliculata_contig9867.23976.1 vs. uniprot
Match: A0A7S1XYD8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYD8_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.060e-44
Identity = 87/200 (43.50%), Postives = 122/200 (61.00%), Query Frame = 0
Query:   29 ERATKISFKDKVS---LPG-GGQSSLMGTGVRAKKFGPMAVNVYAVGLYVDEKEAASELATHKGEDADFLGKNEGFFSRVAKSKFQKTLVLKMAREVGTEKMVSALAESVKPRMSGSKETVDTFQDILSEAMSKEGAAKKGMEFGFVCKPDALCVSVNGKEAGTINSGPLSSAMVNVYLDRNAVSPAARKDFASGVASLL 224
            E AT + FK  +S    PG GG + L G G R K+ GP+ V VYAVGLYVD++   S L + +    + L  ++ FF  + K+ F+K  +LKMAR VG++KMV+ALA+S+KPRM    E +  FQ +LS  + K G+  K   FGF      L VS+NGKE GT+NS  L  A  + Y+  NAVSP A+ +FA G+ +++
Sbjct:   24 EAATGLDFKPTMSDSDFPGVGGDAKLAGMGCRIKQIGPVKVKVYAVGLYVDQRAVQSSLNSFEAFPEETLLGSKAFFKAIRKAPFEKCFMLKMARTVGSDKMVNALADSIKPRMKNEMEALTEFQGLLSAGL-KGGSCTKNTAFGFAASKGKLVVSINGKEEGTVNSRELCDAFTDTYIGDNAVSPDAKSNFAKGLCAMI 222          
BLAST of mRNA_P-canaliculata_contig9867.23976.1 vs. uniprot
Match: A0A6S9FSE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FSE1_HETAK)

HSP 1 Score: 155 bits (393), Expect = 5.650e-44
Identity = 90/210 (42.86%), Postives = 120/210 (57.14%), Query Frame = 0
Query:   16 LLGVTPTARADVAERATKISFKDKVSLPGGGQSSLMGTGVRAKKFGPMAVNVYAVGLYVDEKEAASELATHKG-EDADFLGKNEGFFSRVAKSKFQKTLVLKMAREVGTEKMVSALAESVKPRMSGSKETVDTFQDILSEAMSKEGAAKKGMEFGFVCKPDALCVSVNGKEAGTINSGPLSSAMVNVYLDRNAVSPAARKDFASGVASLL 224
            L+ +   A ADV E  T I F D+      G   L G GVR K+ GP++V VY VG+Y+DE  A  E++ + G + AD      GFFSR+ K    K +VLKMAR VG+E M  ALAES+KPRMSG    + +FQ +L + +S++G+AKKG E  F      L V +NGK AG + S  L  A V+ Y+D   VSP  R   A  + + L
Sbjct:   11 LVIIVALALADVTEPKTGIKFADRF-----GGLGLAGVGVRVKQIGPLSVKVYGVGMYMDESSALEEISEYAGGKKAD-----SGFFSRLRKPSIDKKIVLKMARSVGSETMSEALAESIKPRMSGDLPALSSFQTVLLKGLSEDGSAKKGTELAFDASGGKLNVKINGKSAGDVESSSLCDAFVDTYMDDKGVSPTLRDSIAETLCAKL 210          
BLAST of mRNA_P-canaliculata_contig9867.23976.1 vs. uniprot
Match: A0A7R9YAW0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAW0_9STRA)

HSP 1 Score: 155 bits (393), Expect = 7.540e-44
Identity = 86/197 (43.65%), Postives = 117/197 (59.39%), Query Frame = 0
Query:   31 ATKISFKDKVS---LPGGGQSSLMGTGVRAKKFGPMAVNVYAVGLYVDEKEAASELATHKGEDADFLGKNEGFFSRVAKSKFQKTLVLKMAREVGTEKMVSALAESVKPRMSGSKETVDTFQDILSEAMSKEGAAKKGMEFGFVCKPDALCVSVNGKEAGTINSGPLSSAMVNVYLDRNAVSPAARKDFASGVASLL 224
            AT I F ++++    PG G  +L GTGVR KK GP+AV VYAVGLYVD++   S L + +    + L  ++ FF  + K+ F K   LKMAR VG EKMV+AL+ESV+PRM    E +  FQ +L   + K G+  K   FGF      L VS+NGK+ G + S  L  A+ + YL   AVSP A+  FA G+ ++L
Sbjct:   25 ATGIEFPNRITDKDFPGVGDGTLAGTGVRVKKIGPVAVKVYAVGLYVDQRAVQSSLNSFEAFPEETLLGSKAFFKAIRKAPFDKCFQLKMARTVGGEKMVNALSESVRPRMKSELEALSEFQSVLQSGL-KGGSCVKNTSFGFAANKGKLIVSINGKQEGVVASRELCDALTDTYLGEGAVSPDAKASFAKGLCNML 220          
BLAST of mRNA_P-canaliculata_contig9867.23976.1 vs. uniprot
Match: A0A7S4J4F7_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J4F7_9EUKA)

HSP 1 Score: 124 bits (311), Expect = 1.120e-31
Identity = 84/199 (42.21%), Postives = 114/199 (57.29%), Query Frame = 0
Query:   29 ERATKISFKDKVSLPGGGQSSLMGTGVRAKKFGPMAVNVYAVGLYVDEKEAASELATHKGEDADFLGKNEGFFSRVAKSKFQKTLVLKMAREVGTEKMVSALAESVKPRMSGSKETVDTFQDIL---SEAMSKEGAAKKGMEFGFVCKPDALCVSVNGKEAGTINSGPLSSAMVNVYLDRNAVSPAARKDFASGVASLL 224
            E +TKISF +K     GGQS L+G GVR K  GP  + VY VG+YVD   +   L+  K   A+ +  +  F+    +  F KTLVLKM   V  EKM  A+A+SVKPR+SG K  V   ++ L    +  +K+G A  G EF F  +  ++ VSVNGK   TI+S PL  A++N YLD ++VSP  +   A G+  LL
Sbjct:   27 EPSTKISFPEKR----GGQS-LVGVGVRKK--GP--IKVYGVGMYVDGFASKMSLSKFKSTAAEKV--DSSFYKACVEGGFGKTLVLKMKFGVSKEKMAGAIADSVKPRISGDKSAVAKLEESLLVGCDKYAKDGRAGPGTEFCFAIRGASMGVSVNGKSVATISSKPLCKALLNCYLDGSSVSPGLKSTCAEGLIGLL 214          
BLAST of mRNA_P-canaliculata_contig9867.23976.1 vs. uniprot
Match: A0A7S0Q024_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q024_9EUKA)

HSP 1 Score: 123 bits (308), Expect = 2.680e-31
Identity = 89/217 (41.01%), Postives = 118/217 (54.38%), Query Frame = 0
Query:   11 IGAHCLLGVTPTARADVAERATKISFKDKVSLPGGGQSSLMGTGVRAKKFGPMAVNVYAVGLYVDEKEAASELATHKGEDADFLGKNEGFFSRVAKSKFQKTLVLKMAREVGTEKMVSALAESVKPRMSGSKETVDTFQDILS---EAMSKEGAAKKGMEFGFVCKPDALCVSVNGKEAGTINSGPLSSAMVNVYLDRNAVSPAARKDFASGVASLL 224
            +GA  LL     AR    E ATK+ FKD ++    GQ  L+G GVR K  GP  + VY +G+YVD   +   L+ +K  ++  L     FF  +    F KTLVLKM   V  EKM  ALAES+KPRM+G    V  F+ +L    E  +K+G A  G EF F  +  +L V VNGK+ GTINS PL  A++  Y D  +V+PA +   A G+   L
Sbjct:    5 VGALLLLCAGTHARV---EPATKVGFKDSLN----GQP-LVGVGVRKK--GP--IKVYGIGMYVDAMGSKMSLSKYKQHESA-LKLPASFFEDILGG-FGKTLVLKMVYGVSKEKMAGALAESIKPRMTGGLAAVSEFEQMLMDGCETHAKDGRACAGTEFQFGVRGSSLGVHVNGKKVGTINSKPLCRALLKCYFDSKSVAPALKSTSAEGLLERL 207          
BLAST of mRNA_P-canaliculata_contig9867.23976.1 vs. uniprot
Match: A0A7S0IHP3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IHP3_9EUKA)

HSP 1 Score: 120 bits (301), Expect = 3.840e-30
Identity = 89/212 (41.98%), Postives = 117/212 (55.19%), Query Frame = 0
Query:   16 LLGVTPTARADVAERATKISFKDKVSLPGGGQSSLMGTGVRAKKFGPMAVNVYAVGLYVDEKEAASELATHKGEDADFLGKNEGFFSRVAKSKFQKTLVLKMAREVGTEKMVSALAESVKPRMSGSKETVDTFQDILS---EAMSKEGAAKKGMEFGFVCKPDALCVSVNGKEAGTINSGPLSSAMVNVYLDRNAVSPAARKDFASGVASLL 224
            LL V   AR    E ATK++FKD +S    GQ  L+G GVR K  GP  + VY +G+YVD   +   L+ +K + A      + FF  V    F KTL+LKM   V  EKM  ALAES+KPRMSGS   V  F+ +L    EA +  G A  G EF F  +  +L V VNGK+ GTI+S PL  A++  Y D  +V+P+ +   A G+   L
Sbjct:   20 LLAVDVHARV---EPATKVAFKDSLS----GQP-LVGVGVRKK--GP--IKVYGIGMYVDSLGSKMALSKYK-KHASAAELPKQFFEDVLGG-FGKTLLLKMVYGVSKEKMAGALAESIKPRMSGSLSAVAEFEQMLMAGCEAHAMGGRAAGGTEFQFAVRGSSLGVQVNGKKVGTISSKPLCQALLKCYFDGKSVAPSLKSTCAEGLLERL 217          
BLAST of mRNA_P-canaliculata_contig9867.23976.1 vs. uniprot
Match: A0A0G4GWT2_9ALVE (Chalcone_isomerase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GWT2_9ALVE)

HSP 1 Score: 112 bits (281), Expect = 4.560e-27
Identity = 74/201 (36.82%), Postives = 108/201 (53.73%), Query Frame = 0
Query:   25 ADVAERATKISFKDKVSLPGGGQSSLMGTGVRAKKF-GPMAVNVYAVGLYVDEKEAASELATHKGEDADFLGKNEGFFSRVAKSKFQKTLVLKMAREVGTEKMVSALAESVKPRMSG-SKETVDTFQDILSEAMSKEGAAKKGMEFGFVCKPDALCVSVNGKEAGTINSGPLSSAMVNVYLDRNAVSPAARKDFASGVASL 223
            A + + AT + F+  VS P   + +L+G GVRAK   GP+AVNVY+VGLYV+  +A   L+  K  +   L K E F+  + K    K + LK AR VG  K+V AL       ++G  +E++  F  +L +++      K+ +      KPD L V V GK AG++    L  A  ++YL +N VS  A+K FAS V  L
Sbjct:   34 AILTDAATGLDFETDVSFPSSPKMTLLGAGVRAKALLGPIAVNVYSVGLYVEPSKARQTLSGFKTIEEAELAKKEDFYKALMKEDLPKAMHLKFARSVGASKIVEALTS-----LNGVPEESLSKFSKLLLDSIGSSIGYKETVTLSS-SKPDTLDVIVRGKHAGSVRDSKLPKAFFDLYLGKNPVSSEAKKAFASRVKDL 228          
BLAST of mRNA_P-canaliculata_contig9867.23976.1 vs. uniprot
Match: A0A7S0WAP9_9CRYP (Hypothetical protein n=2 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WAP9_9CRYP)

HSP 1 Score: 88.6 bits (218), Expect = 4.670e-18
Identity = 70/199 (35.18%), Postives = 95/199 (47.74%), Query Frame = 0
Query:   27 VAERATKISFKDKVSLPGGGQS-SLMGTGVRAKKF-GPMAVNVYAVGLYVDEKEAASELATHKGEDADFLGKNEGFFSRVAKSKFQKTLVLKMAREVGTEKMVSALAESVKPRMSGSKETVDTFQDILSEAMSKEGAAKKGMEFGFVCKPDALCVSVNGKEAGTINSGPLSSAMVNVYLDRNAVSPAARKDFASGVASL 223
            V E  T I+F    S+  GG+S  LMG G R KK  GP+AVNVYA+G+YVD+  A++       E A     ++G F+        K+L L MAR V  EK+  ALAE ++PR+ G+   V+ F+         E          F      L VS  G      NS PL  A+ ++YL    VS  A++  A G   L
Sbjct:   15 VKEPITGITFPG--SMQAGGKSLELMGCGERKKKIVGPVAVNVYAIGMYVDQGAASAAGKGTSSEAAAAKVLSDGSFT--------KSLRLVMARTVNAEKIGDALAEQIEPRVRGTGAPVEEFKGFFKGLDKLENQ----QVVTFTQSGTTLAVSAPGNRTSQFNSAPLCKALFDIYLGDKPVSDNAKRAMAQGFLKL 199          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9867.23976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP06_ECTSI2.110e-10575.23Chalcone Isomerase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835Z9G1_9STRA3.530e-7057.43Chalcone isomerase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S1XYD8_9STRA2.060e-4443.50Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A6S9FSE1_HETAK5.650e-4442.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9YAW0_9STRA7.540e-4443.65Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4J4F7_9EUKA1.120e-3142.21Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S0Q024_9EUKA2.680e-3141.01Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S0IHP3_9EUKA3.840e-3041.98Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A0G4GWT2_9ALVE4.560e-2736.82Chalcone_isomerase domain-containing protein n=1 T... [more]
A0A7S0WAP9_9CRYP4.670e-1835.18Hypothetical protein n=2 Tax=Hemiselmis tepida Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016087Chalcone isomerasePFAMPF16036Chalcone_3coord: 32..209
e-value: 4.4E-11
score: 43.2
IPR016089Chalcone isomerase, orthogonal bundle domain superfamilyGENE3D1.10.890.20coord: 79..219
e-value: 1.3E-37
score: 131.4
IPR016088Chalcone isomerase, 3-layer sandwichGENE3D3.50.70.10coord: 36..202
e-value: 1.3E-37
score: 131.4
NoneNo IPR availablePANTHERPTHR47698FAMILY NOT NAMEDcoord: 25..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..226
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.674
IPR036298Chalcone isomerase superfamilySUPERFAMILY54626Chalcone isomerasecoord: 28..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9867contigP-canaliculata_contig9867:679..4321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9867.23976.1mRNA_P-canaliculata_contig9867.23976.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9867 643..5525 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9867.23976.1 ID=prot_P-canaliculata_contig9867.23976.1|Name=mRNA_P-canaliculata_contig9867.23976.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=227bp
MRLVVLFTGVIGAHCLLGVTPTARADVAERATKISFKDKVSLPGGGQSSL
MGTGVRAKKFGPMAVNVYAVGLYVDEKEAASELATHKGEDADFLGKNEGF
FSRVAKSKFQKTLVLKMAREVGTEKMVSALAESVKPRMSGSKETVDTFQD
ILSEAMSKEGAAKKGMEFGFVCKPDALCVSVNGKEAGTINSGPLSSAMVN
VYLDRNAVSPAARKDFASGVASLLVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016087Chalcone_isomerase
IPR016089Chalcone_isomerase_bundle_sf
IPR016088Chalcone_isomerase_3-sand
IPR036298Chalcone_isomerase_sf