prot_P-canaliculata_contig9777.23876.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9777.23876.1
Unique Nameprot_P-canaliculata_contig9777.23876.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length322
Homology
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: A0A6H5KGT8_9PHAE (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGT8_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 5.140e-115
Identity = 196/323 (60.68%), Postives = 236/323 (73.07%), Query Frame = 0
Query:    1 MGVIALIIPLYYHFTITGENATTDFRQTQENNIWTCTLVLQVLQLCLLPVVWMIDDLFQISRELIVIIVVGTIQSVFVKLFMSGILEGKDMEKYINAPNLQLVATSILFGLSVIDPVRRLKFSPMARTSAAMARAEAXXXXXXXXXXXXXXXXRSRDQVSMSRGDSASSQHMWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCGQIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFD-DEEELSGAFNQAYSEIRYMIESNILHKFTETDEFRKAVNKRPHSRRKQGL-LFAC 321
            +GV++L IP+YY  T+  E    D+R  Q    W CTLVLQ+ Q+CLLPVVW IDDLF ISREL+VIIV+G IQSVFVKLF+   L G ++  +IN PN+QL+  S+LFGLSVIDPVRRLKFSPMA++SA M RA               XXX  + +++ S     ++QHMW Y+KIA + AMAEAFR+FANRALCQESVWFLEEVSRYQNEDYTIASPLG G+I AFEAI KRF+ DGAPDEV+L   +KK I+ M  K    F+  +EELSG F++AYS IRYMIESNI+HKF ETDEFRKA N  P SRR++ L L  C
Sbjct:  110 IGVMSLSIPIYYKITVPNE----DYRDHQAGVKWLCTLVLQITQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIEEELTG-EIRNFINPPNMQLLTISVLFGLSVIDPVRRLKFSPMAQSSAPMTRAVLRSSASKTQKPRRGXXXXQQRKITPSE---EAAQHMWTYDKIALDNAMAEAFRVFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKIEAFEAIAKRFVEDGAPDEVNLSYTDKKNIIAMLNKEARGFEPSDEELSGIFDRAYSHIRYMIESNIVHKFLETDEFRKAANSVPPSRRERRLFLLPC 424          
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 1.150e-31
Identity = 109/316 (34.49%), Postives = 157/316 (49.68%), Query Frame = 0
Query:    6 LIIPLYYHFTITGENATTDFRQTQENNIWTCTLVLQVLQLCLLPVVWMIDDLFQISRELIVIIVVGTIQSVFVKLFMSGILEGKDMEKYINAPNLQLVATSILFGLSVIDPVRRLKFSPMARTSAAMARAEAXXXXXXXXXXXXXXXXRSRDQVSMSRGDSA-------SSQH-----MWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDY--TIASPLGCG---QIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDD--EEELSGAFNQAYSEIRYMIESNILHKFTETDEFR 302
            L IP+Y+  T+   +A +  +QT    I     VL V   C+ P +  +DDLF IS ELI  IV  TI  + +   + G+  G    +++ A NL ++   +LFG+S++ P+RRL   P A T    A                      R Q    RGD         S  H     +W++E+I   P +A AF  ++ RALC ES  FL EVSRYQN DY  TI +  G     Q   F  IT  FI  G+P+EV++  KE+K IL +Y K  + F+D  + E    F +AY  ++ M+E+N+L +F  TD F+
Sbjct:  178 LAIPIYHEHTLGVWDAIS--KQTTILKIE--ARVLAVALACIYPFIRNVDDLFSISTELI--IVTATIGLITIVQEIDGLWGGCYERRWL-ANNLSVLFMIVLFGVSIVAPLRRLASDPFAATRRNYANRVLPDHTEPHSIGGNRLDAVRRGQSE--RGDDRGRDGGRRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFK 484          
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D7G1D4_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1D4_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.210e-28
Identity = 65/152 (42.76%), Postives = 100/152 (65.79%), Query Frame = 0
Query:  155 SRDQVSMSRGDSASS--QHMWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCGQIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDDEEELSG--AFNQAYSEIRYMIESNILHKFTETDEFR 302
            S+D+  +S  D  +S  +  W+Y+ +   P +AEAFR FA+RALCQES+ FLE V++Y++ DY+IA P+   Q AAF AI KRF+ADGA DE+++   +K+ IL ++   +  F +  +       N+AY EIR M+E+N+L++F  T+ FR
Sbjct:   48 SQDESRLSDCDETASTVRTKWSYDTMTTVPEVAEAFRGFAHRALCQESIMFLEAVTQYESGDYSIAKPIA-SQFAAFNAIVKRFVADGALDEINIGGTDKERILKIFQCGSTAFFEMNDAGRRLVLNKAYIEIRDMLETNLLYRFLHTEAFR 198          
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: A0A6H5KIU5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIU5_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 2.520e-28
Identity = 61/127 (48.03%), Postives = 87/127 (68.50%), Query Frame = 0
Query:  178 IAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCGQIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDDEEELSG--AFNQAYSEIRYMIESNILHKFTETDEFR 302
            +A  P +AEAFR FA+RALCQES+ FLEEV++Y++ DY+IA P+   Q AAF AI KRF+ DGA DE+++   +K+ IL ++   +  F +  E       N+AY EIR M+E+N+LH+F  T+ FR
Sbjct:    1 MAKVPEVAEAFRGFAHRALCQESIMFLEEVTKYESGDYSIAKPIA-SQFAAFNAIVKRFVVDGALDEINIGGTDKERILKIFQSGSTAFFEMNEAGRRLVLNKAYIEIRDMLETNLLHRFLHTEAFR 126          
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 9.430e-24
Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 0
Query:  172 MWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCG-----QIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDD--EEELSGAFNQAYSEIRYMIESNILHKFTETDEFRKAVNK 307
            +W++E++   P +A AF  ++ RALC ESV FL EVSRYQN+DY  A+P         Q   F  IT  FI  GAP+EV++  K++K IL +Y K  + F++  EEE    F ++Y E++ M+E+N+L +F  TD+F K+V K
Sbjct:  460 VWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDY--ATPTNAAGTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQF-KSVRK 599          
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 4.620e-21
Identity = 58/142 (40.85%), Postives = 86/142 (60.56%), Query Frame = 0
Query:  172 MWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCG----QIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDD--EEELSGAFNQAYSEIRYMIESNILHKFTETDEFRKAVNK 307
            +W++E++   P +A AF  ++ RALC ESV FL EVSRYQN+DY   +    G    Q   F  IT  FI  GAP+EV++    +K IL +Y K  + F++  EEE    F ++Y  ++ M+E+N+L +F  TD+F K+V K
Sbjct:  389 VWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQF-KSVRK 525          
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D8LEK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK8_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 7.080e-18
Identity = 67/230 (29.13%), Postives = 118/230 (51.30%), Query Frame = 0
Query:    1 MGVIALIIPLYYHFTI-TGENATTDFRQTQENNIWTCTLVLQVLQLCLLPVVWMIDDLFQISRELIVIIVVGTIQSVFVKLFMSGILEGKDMEKYINAPNLQLVATSILFGLSVIDPVRRLKFSPMARTSAAMARAEAXXXXXXXXXXXXXXXXRSRDQVSMSRGDSASSQHMWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCGQIAAF 229
            +G  +L  PLY  + +  G  A   F +     +W  ++  Q + L L P+VW  DD+F ISREL V+IV+ T  +  +  F       +D+ +++N   +  ++ +++F LS+  P+R+L F P+  +   ++RA A                 +    S   G   ++  +W YEK+ A P+++ AF  F+ +ALCQES++FL++V+   N+D  I      GQ+A +
Sbjct:  180 LGAGSLGFPLYVMYDVGDGPFAELLFAERAGVLLWRVSIASQAMVLSLYPLVWKTDDIFNISRELRVVIVL-TFSTTLIGHFGDN-HSSEDVARWVNTRIMGFISATVIFFLSLGLPIRQLVFDPLESSDPRVSRALAKRRQGRLGPESTTTPCCTSSAGSEFSG--VNTLALWTYEKVEAMPSVSVAFHEFSRKALCQESIFFLKDVTNSGNKD-AIVGVYEAGQLAFY 404          
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D7FTV9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV9_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.860e-14
Identity = 46/150 (30.67%), Postives = 77/150 (51.33%), Query Frame = 0
Query:  172 MWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCG-----QIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDDEEELSGAFNQAYSEIRYMIESNILHKFTETDEFRKAVNKRPHSRRKQG 316
            +W++E+IA+ P +A AF  ++ RALC ESV FL EVSRYQN +Y + +          Q  +F  IT  FI  G+P+EV++                            F++A+ +++ M+E+N++ +F  TD F+    +R + +   G
Sbjct:    3 VWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSPEEVNIRM-------------------------IFSRAHRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMG 127          
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 4.870e-13
Identity = 52/168 (30.95%), Postives = 83/168 (49.40%), Query Frame = 0
Query:  154 RSRDQVSMSRGDSASSQHMWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCG-----QIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDDEEELSGAFNQAYSEIRYMIESNILHKFTETDEFRKAVNKRPHSRRKQG 316
            R R   S SR D    + +W++E+IA+ P +A AF  ++ RALC ESV FL EVSRYQN +Y + +          Q  +F  IT  FI  G+ +EV++                            F++AY +++ M+E+N++ +F  TD F+    +R + +   G
Sbjct:  322 RDRGCSSRSRSDREEME-VWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNIRM-------------------------IFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMG 463          
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D8LEL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL1_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.040e-6
Identity = 36/124 (29.03%), Postives = 62/124 (50.00%), Query Frame = 0
Query:  100 LQLVATSILFGLSVIDPVRRLKFSPMARTSAAMARAEAXXXXXXXXXXXXXXXXRSRDQVSMSRGDSA--------------SSQHMWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSR 209
            +  +++ ++F LS+  P R+L F+P+  +   ++ A A                R +D+ +   GDS               S   +W YEK+AA P+++  F  FA +ALCQES+ FL++V+R
Sbjct:   49 IAFISSCVMFSLSLGAPARQLFFNPLESSDPEVSDALA----------------RRKDRRAAIGGDSTAPTNSTVDGADSEMSESTLWTYEKVAAMPSVSAVFDEFARKALCQESILFLKDVTR 156          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KGT8_9PHAE5.140e-11560.68RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FTW0_ECTSI1.150e-3134.49RGS domain-containing protein n=2 Tax=Ectocarpus s... [more]
D7G1D4_ECTSI1.210e-2842.76RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KIU5_9PHAE2.520e-2848.03RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2T8_ECTSI9.430e-2442.66RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LEP9_9PHAE4.620e-2140.85RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LEK8_ECTSI7.080e-1829.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTV9_ECTSI2.860e-1430.67RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW1_ECTSI4.870e-1330.95RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LEL1_ECTSI1.040e-629.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..145
NoneNo IPR availableGENE3D1.20.58.1850coord: 161..308
e-value: 1.0E-17
score: 66.0
NoneNo IPR availablePANTHERPTHR10845REGULATOR OF G PROTEIN SIGNALINGcoord: 148..311
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..321
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
NoneNo IPR availableTMHMMTMhelixcoord: 32..54
IPR016137RGS domainSMARTSM00315RGS_3coord: 174..305
e-value: 0.0017
score: 25.5
IPR016137RGS domainPFAMPF00615RGScoord: 175..303
e-value: 2.5E-9
score: 37.4
IPR016137RGS domainPROSITEPS50132RGScoord: 174..305
score: 17.514
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 169..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9777contigP-canaliculata_contig9777:220..5857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9777.23876.1mRNA_P-canaliculata_contig9777.23876.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9777 190..5857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9777.23876.1 ID=prot_P-canaliculata_contig9777.23876.1|Name=mRNA_P-canaliculata_contig9777.23876.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=322bp
MGVIALIIPLYYHFTITGENATTDFRQTQENNIWTCTLVLQVLQLCLLPV
VWMIDDLFQISRELIVIIVVGTIQSVFVKLFMSGILEGKDMEKYINAPNL
QLVATSILFGLSVIDPVRRLKFSPMARTSAAMARAEARSAAARQRRQRRG
TTSRSRDQVSMSRGDSASSQHMWNYEKIAANPAMAEAFRLFANRALCQES
VWFLEEVSRYQNEDYTIASPLGCGQIAAFEAITKRFIADGAPDEVSLCSK
EKKEILNMYTKPNDPFDDEEELSGAFNQAYSEIRYMIESNILHKFTETDE
FRKAVNKRPHSRRKQGLLFAC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS
IPR036305RGS_sf