mRNA_P-canaliculata_contig9777.23876.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig9777.23876.1
Unique NamemRNA_P-canaliculata_contig9777.23876.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
[Close]
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: A0A6H5KGT8_9PHAE (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGT8_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 2.150e-119
Identity = 203/333 (60.96%), Postives = 244/333 (73.27%), Query Frame = 1 
Query:    1 EKLLVTASLSMGVIALIIPLYYHFTITGENATTDFRQTQENNIWTCTLVLQVLQLCLLPVVWMIDDLFQISRELIVIIVVGTIQSVFVKLFMSGILEGKDMEKYINAPNLQLVATSILFGLSVIDPVRRLKFSPMARTSAAMARAEAXXXXXXXXXXXXXXXXRSRDQVSMSRGDSASSQHMWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCGQIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFD-DEEELSGAFNQAYSEIRYMIESNILHKFTETDEFRKAVNKRPHSRRKQGL-LFAC 993
            EKLL+  SLS+GV++L IP+YY  T+  E    D+R  Q    W CTLVLQ+ Q+CLLPVVW IDDLF ISREL+VIIV+G IQSVFVKLF+   L G ++  +IN PN+QL+  S+LFGLSVIDPVRRLKFSPMA++SA M RA               XXX  + +++ S     ++QHMW Y+KIA + AMAEAFR+FANRALCQESVWFLEEVSRYQNEDYTIASPLG G+I AFEAI KRF+ DGAPDEV+L   +KK I+ M  K    F+  +EELSG F++AYS IRYMIESNI+HKF ETDEFRKA N  P SRR++ L L  C
Sbjct:  100 EKLLIAVSLSIGVMSLSIPIYYKITVPNE----DYRDHQAGVKWLCTLVLQITQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIEEELTG-EIRNFINPPNMQLLTISVLFGLSVIDPVRRLKFSPMAQSSAPMTRAVLRSSASKTQKPRRGXXXXQQRKITPSE---EAAQHMWTYDKIALDNAMAEAFRVFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKIEAFEAIAKRFVEDGAPDEVNLSYTDKKNIIAMLNKEARGFEPSDEELSGIFDRAYSHIRYMIESNIVHKFLETDEFRKAANSVPPSRRERRLFLLPC 424
[Close]
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 1.460e-31
Identity = 111/322 (34.47%), Postives = 162/322 (50.31%), Query Frame = 1 
Query:   28 SMGVIALIIPLYYHFTITGENATTDFRQTQENNIWTCTLVLQVLQLCLLPVVWMIDDLFQISRELIVIIVVGTIQSVFVKLFMSGILEGKDMEKYINAPNLQLVATSILFGLSVIDPVRRLKFSPMARTSAAMARAEAXXXXXXXXXXXXXXXXRSRDQVSMSRGDSA-------SSQH-----MWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDY--TIASPLGCG---QIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDD--EEELSGAFNQAYSEIRYMIESNILHKFTETDEFR 936
            S+G++A  IP+Y+  T+   +A +  +QT    I     VL V   C+ P +  +DDLF IS ELI  IV  TI  + +   + G+  G    +++ A NL ++   +LFG+S++ P+RRL   P A T    A                      R Q    RGD         S  H     +W++E+I   P +A AF  ++ RALC ES  FL EVSRYQN DY  TI +  G     Q   F  IT  FI  G+P+EV++  KE+K IL +Y K  + F+D  + E    F +AY  ++ M+E+N+L +F  TD F+
Sbjct:  174 SVGMLA--IPIYHEHTLGVWDAIS--KQTTILKIE--ARVLAVALACIYPFIRNVDDLFSISTELI--IVTATIGLITIVQEIDGLWGGCYERRWL-ANNLSVLFMIVLFGVSIVAPLRRLASDPFAATRRNYANRVLPDHTEPHSIGGNRLDAVRRGQSE--RGDDRGRDGGRRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFK 484
[Close]
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D7G1D4_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1D4_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.500e-28
Identity = 65/152 (42.76%), Postives = 100/152 (65.79%), Query Frame = 1 
Query:  493 SRDQVSMSRGDSASS--QHMWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCGQIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDDEEELSG--AFNQAYSEIRYMIESNILHKFTETDEFR 936
            S+D+  +S  D  +S  +  W+Y+ +   P +AEAFR FA+RALCQES+ FLE V++Y++ DY+IA P+   Q AAF AI KRF+ADGA DE+++   +K+ IL ++   +  F +  +       N+AY EIR M+E+N+L++F  T+ FR
Sbjct:   48 SQDESRLSDCDETASTVRTKWSYDTMTTVPEVAEAFRGFAHRALCQESIMFLEAVTQYESGDYSIAKPIA-SQFAAFNAIVKRFVADGALDEINIGGTDKERILKIFQCGSTAFFEMNDAGRRLVLNKAYIEIRDMLETNLLYRFLHTEAFR 198
[Close]
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: A0A6H5KIU5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIU5_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.110e-28
Identity = 61/127 (48.03%), Postives = 87/127 (68.50%), Query Frame = 1 
Query:  562 IAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCGQIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDDEEELSG--AFNQAYSEIRYMIESNILHKFTETDEFR 936
            +A  P +AEAFR FA+RALCQES+ FLEEV++Y++ DY+IA P+   Q AAF AI KRF+ DGA DE+++   +K+ IL ++   +  F +  E       N+AY EIR M+E+N+LH+F  T+ FR
Sbjct:    1 MAKVPEVAEAFRGFAHRALCQESIMFLEEVTKYESGDYSIAKPIA-SQFAAFNAIVKRFVVDGALDEINIGGTDKERILKIFQSGSTAFFEMNEAGRRLVLNKAYIEIRDMLETNLLHRFLHTEAFR 126
[Close]
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.160e-23
Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 1 
Query:  544 MWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCG-----QIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDD--EEELSGAFNQAYSEIRYMIESNILHKFTETDEFRKAVNK 951
            +W++E++   P +A AF  ++ RALC ESV FL EVSRYQN+DY  A+P         Q   F  IT  FI  GAP+EV++  K++K IL +Y K  + F++  EEE    F ++Y E++ M+E+N+L +F  TD+F K+V K
Sbjct:  460 VWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDY--ATPTNAAGTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQF-KSVRK 599
[Close]
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 5.600e-21
Identity = 58/142 (40.85%), Postives = 86/142 (60.56%), Query Frame = 1 
Query:  544 MWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCG----QIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDD--EEELSGAFNQAYSEIRYMIESNILHKFTETDEFRKAVNK 951
            +W++E++   P +A AF  ++ RALC ESV FL EVSRYQN+DY   +    G    Q   F  IT  FI  GAP+EV++    +K IL +Y K  + F++  EEE    F ++Y  ++ M+E+N+L +F  TD+F K+V K
Sbjct:  389 VWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQF-KSVRK 525
[Close]
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D8LEK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK8_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 6.150e-18
Identity = 70/240 (29.17%), Postives = 122/240 (50.83%), Query Frame = 1 
Query:    1 EKLLVTASLSMGVIALIIPLYYHFTI-TGENATTDFRQTQENNIWTCTLVLQVLQLCLLPVVWMIDDLFQISRELIVIIVVGTIQSVFVKLFMSGILEGKDMEKYINAPNLQLVATSILFGLSVIDPVRRLKFSPMARTSAAMARAEAXXXXXXXXXXXXXXXXRSRDQVSMSRGDSASSQHMWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCGQIAAF 717
            E+  V   L +G  +L  PLY  + +  G  A   F +     +W  ++  Q + L L P+VW  DD+F ISREL V+IV+ T  +  +  F       +D+ +++N   +  ++ +++F LS+  P+R+L F P+  +   ++RA A                 +    S   G   ++  +W YEK+ A P+++ AF  F+ +ALCQES++FL++V+   N+D  I      GQ+A +
Sbjct:  170 ERNHVCMCLVLGAGSLGFPLYVMYDVGDGPFAELLFAERAGVLLWRVSIASQAMVLSLYPLVWKTDDIFNISRELRVVIVL-TFSTTLIGHFGDN-HSSEDVARWVNTRIMGFISATVIFFLSLGLPIRQLVFDPLESSDPRVSRALAKRRQGRLGPESTTTPCCTSSAGSEFSG--VNTLALWTYEKVEAMPSVSVAFHEFSRKALCQESIFFLKDVTNSGNKD-AIVGVYEAGQLAFY 404
[Close]
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D7FTV9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV9_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 3.210e-14
Identity = 46/150 (30.67%), Postives = 77/150 (51.33%), Query Frame = 1 
Query:  544 MWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCG-----QIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDDEEELSGAFNQAYSEIRYMIESNILHKFTETDEFRKAVNKRPHSRRKQG 978
            +W++E+IA+ P +A AF  ++ RALC ESV FL EVSRYQN +Y + +          Q  +F  IT  FI  G+P+EV++                            F++A+ +++ M+E+N++ +F  TD F+    +R + +   G
Sbjct:    3 VWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSPEEVNIRM-------------------------IFSRAHRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMG 127
[Close]
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 5.580e-13
Identity = 52/168 (30.95%), Postives = 83/168 (49.40%), Query Frame = 1 
Query:  490 RSRDQVSMSRGDSASSQHMWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSRYQNEDYTIASPLGCG-----QIAAFEAITKRFIADGAPDEVSLCSKEKKEILNMYTKPNDPFDDEEELSGAFNQAYSEIRYMIESNILHKFTETDEFRKAVNKRPHSRRKQG 978
            R R   S SR D    + +W++E+IA+ P +A AF  ++ RALC ESV FL EVSRYQN +Y + +          Q  +F  IT  FI  G+ +EV++                            F++AY +++ M+E+N++ +F  TD F+    +R + +   G
Sbjct:  322 RDRGCSSRSRSDREEME-VWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNIRM-------------------------IFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMG 463
[Close]
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Match: D8LEL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL1_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.100e-6
Identity = 36/124 (29.03%), Postives = 62/124 (50.00%), Query Frame = 1 
Query:  328 LQLVATSILFGLSVIDPVRRLKFSPMARTSAAMARAEAXXXXXXXXXXXXXXXXRSRDQVSMSRGDSA--------------SSQHMWNYEKIAANPAMAEAFRLFANRALCQESVWFLEEVSR 657
            +  +++ ++F LS+  P R+L F+P+  +   ++ A A                R +D+ +   GDS               S   +W YEK+AA P+++  F  FA +ALCQES+ FL++V+R
Sbjct:   49 IAFISSCVMFSLSLGAPARQLFFNPLESSDPEVSDALA----------------RRKDRRAAIGGDSTAPTNSTVDGADSEMSESTLWTYEKVAAMPSVSAVFDEFARKALCQESILFLKDVTR 156
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9777.23876.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KGT8_9PHAE2.150e-11960.96RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FTW0_ECTSI1.460e-3134.47RGS domain-containing protein n=2 Tax=Ectocarpus s... [more]
D7G1D4_ECTSI1.500e-2842.76RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KIU5_9PHAE3.110e-2848.03RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2T8_ECTSI1.160e-2342.66RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LEP9_9PHAE5.600e-2140.85RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LEK8_ECTSI6.150e-1829.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTV9_ECTSI3.210e-1430.67RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW1_ECTSI5.580e-1330.95RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LEL1_ECTSI1.100e-629.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9777contigP-canaliculata_contig9777:190..5857 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score61.2
Seed ortholog evalue1e-06
Seed eggNOG ortholog2880.D8LLA9
EggNOG free text desc.Regulator of G protein signaling domain
EggNOG OGs2D0MX@1,2SERP@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRGS domain
Ec32 orthologEc-18_000030.1
Exons9
Model size996
Cds size966
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9777.23876.1prot_P-canaliculata_contig9777.23876.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig9777 220..5857 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817340.4677908-UTR-P-canaliculata_contig9777:189..2191622817340.4677908-UTR-P-canaliculata_contig9777:189..219Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9777 190..219 +
1693495233.7881148-UTR-P-canaliculata_contig9777:189..2191693495233.7881148-UTR-P-canaliculata_contig9777:189..219Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9777 190..219 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817340.478897-CDS-P-canaliculata_contig9777:219..2871622817340.478897-CDS-P-canaliculata_contig9777:219..287Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 220..287 +
1693495233.8022354-CDS-P-canaliculata_contig9777:219..2871693495233.8022354-CDS-P-canaliculata_contig9777:219..287Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 220..287 +
1622817340.4893296-CDS-P-canaliculata_contig9777:784..8711622817340.4893296-CDS-P-canaliculata_contig9777:784..871Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 785..871 +
1693495233.8126783-CDS-P-canaliculata_contig9777:784..8711693495233.8126783-CDS-P-canaliculata_contig9777:784..871Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 785..871 +
1622817340.5053716-CDS-P-canaliculata_contig9777:1213..12841622817340.5053716-CDS-P-canaliculata_contig9777:1213..1284Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 1214..1284 +
1693495233.822449-CDS-P-canaliculata_contig9777:1213..12841693495233.822449-CDS-P-canaliculata_contig9777:1213..1284Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 1214..1284 +
1622817340.517169-CDS-P-canaliculata_contig9777:2357..24661622817340.517169-CDS-P-canaliculata_contig9777:2357..2466Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 2358..2466 +
1693495233.831441-CDS-P-canaliculata_contig9777:2357..24661693495233.831441-CDS-P-canaliculata_contig9777:2357..2466Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 2358..2466 +
1622817340.5361922-CDS-P-canaliculata_contig9777:3376..34841622817340.5361922-CDS-P-canaliculata_contig9777:3376..3484Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 3377..3484 +
1693495233.8406346-CDS-P-canaliculata_contig9777:3376..34841693495233.8406346-CDS-P-canaliculata_contig9777:3376..3484Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 3377..3484 +
1622817340.5493984-CDS-P-canaliculata_contig9777:4367..45501622817340.5493984-CDS-P-canaliculata_contig9777:4367..4550Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 4368..4550 +
1693495233.8500268-CDS-P-canaliculata_contig9777:4367..45501693495233.8500268-CDS-P-canaliculata_contig9777:4367..4550Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 4368..4550 +
1622817340.5625782-CDS-P-canaliculata_contig9777:4853..49701622817340.5625782-CDS-P-canaliculata_contig9777:4853..4970Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 4854..4970 +
1693495233.8603096-CDS-P-canaliculata_contig9777:4853..49701693495233.8603096-CDS-P-canaliculata_contig9777:4853..4970Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 4854..4970 +
1622817340.5739343-CDS-P-canaliculata_contig9777:5450..55251622817340.5739343-CDS-P-canaliculata_contig9777:5450..5525Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 5451..5525 +
1693495233.8705344-CDS-P-canaliculata_contig9777:5450..55251693495233.8705344-CDS-P-canaliculata_contig9777:5450..5525Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 5451..5525 +
1622817340.58455-CDS-P-canaliculata_contig9777:5709..58571622817340.58455-CDS-P-canaliculata_contig9777:5709..5857Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 5710..5857 +
1693495233.8810337-CDS-P-canaliculata_contig9777:5709..58571693495233.8810337-CDS-P-canaliculata_contig9777:5709..5857Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9777 5710..5857 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig9777.23876.1

>prot_P-canaliculata_contig9777.23876.1 ID=prot_P-canaliculata_contig9777.23876.1|Name=mRNA_P-canaliculata_contig9777.23876.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=322bp
MGVIALIIPLYYHFTITGENATTDFRQTQENNIWTCTLVLQVLQLCLLPV
VWMIDDLFQISRELIVIIVVGTIQSVFVKLFMSGILEGKDMEKYINAPNL
QLVATSILFGLSVIDPVRRLKFSPMARTSAAMARAEARSAAARQRRQRRG
TTSRSRDQVSMSRGDSASSQHMWNYEKIAANPAMAEAFRLFANRALCQES
VWFLEEVSRYQNEDYTIASPLGCGQIAAFEAITKRFIADGAPDEVSLCSK
EKKEILNMYTKPNDPFDDEEELSGAFNQAYSEIRYMIESNILHKFTETDE
FRKAVNKRPHSRRKQGLLFAC*
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mRNA from alignment at P-canaliculata_contig9777:190..5857+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9777.23876.1 ID=mRNA_P-canaliculata_contig9777.23876.1|Name=mRNA_P-canaliculata_contig9777.23876.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=5668bp|location=Sequence derived from alignment at P-canaliculata_contig9777:190..5857+ (Pelvetia canaliculata dioecious)
GAAAAGCTATTGGTGACCGCGAGTCTCTCGATGGGTGTAATCGCCCTGAT
TATTCCTCTCTACTACCACTTTACCATCACCGGGGAAAATGCTACCACGT
GAGTCTGGCTCCTCAACCCGGCCGTTCATTCAATGTTTCATGGTCAAGGG
GAAGGGCAGGGAGGTTCAATCTCTCGCCGACCCGCGCTTTGCAAAAGCCA
GTATATGCAAGTCTCTATTTTTTATGTATTTGGCATGTATTATAAATCTC
CCTTCAGGACTTTAGAATATTCTGCACTACAGTATAATTTATACTAAGAA
AAAGATCTCTGTTGGGCAGCGCATCTAAAGATTTTGTTCGAGCACAGGAA
GAAAATGTGTTAAATTTTATTACTACATTCAGTCGGACCAAGATAACGCC
AAATACTTAGTGGAGGGTTTCTAGAGTTCCGTCGGACGTAAAAATTGTGG
TTGGCCGGGTAGTATTTTTTTAGACATCTCTCGACTCTGATCCCATTTTC
TATTTTCACCCCCACACAAAATTAATCTTTTTTCACTTGTCGGAAAGTAA
AAACAACTTGGATCCACCGTGTATGCTTTTTTGCACGACTCTCAGGGATT
TTCGACAGACGCAGGAAAATAACATTTGGACGTGCACCCTCGTGCTGCAA
GTGCTCCAGCTGTGCCTACTTCCTGTGGTGTGGTGAGTCAGTCCTGTTAG
TAGTCATAGTCCTAGTCCACGCGGTGCCGGCCCAACGCAGACTGGAGTAC
CAGCAGTGATTAGGCCCCACCTTTTCTTCCTGGGAAGGTTTGTAATTCAG
GGTTAGGTCTGCGTACACCATACCCCATTGCTCAGTCTTGATGATGTGAC
ATGTGACGCGAAATGTTTTCCGCCACCCCCCACCACCCCCCTTCCACATC
TCTATTAAAACCTCTCGTGTTCGCGAATAGCGAGGTATGATAGTTTTCGC
TCCCCCCCCCCGCCATTCCGTCCCTCGATCGCGACGTTGATCCGTTACTG
CTGCCTTGTATCTCCGCCGCTCAGGATGATCGATGACCTCTTTCAAATCA
GCAGGGAGTTGATCGTGATCATCGTGGTGGGGACCATACAGAGCGGTGAG
AATGGGCATACAACTGCAGTACTATAGGGCATTATATAGATACTATTAGT
GCGAGATAGTTGAGAAAAATGTTTTGCGTTTCAATGTTTTTTTTGCGTTG
TTGAAGGGATGAGGATATTAGAGGAGAAAGAAGAGCATTTGCGGTCGCAA
GCATAGCATTGCAAACTTACTGCGCTGTTGATGCAAGCTTTTAAACCGAA
GTAAAAGCAAAATAATTACAGAAAAATGTTGTAAAAAAAAACAAAACAAT
TACAAAAAATGTACGCAGGAGTGAGCCCCGCGCTTTTCTCTCCGCTATTT
GTTTTGACTAATCTTAGGTTTCGCAACCCGACATGCATCCATTTGTTGTC
AGCCGGTACGCTTTGGCGTTTCTGATTTCTTGGTAAAATCATTCAACTTT
AAACGCTTCCTAATGAGGGTTTTTGGTTAACATATTCGCGGTTGTTCCTT
CCTTTCTCCCCTTTTTTTGTTCAGCATAAGTTGAATACAGTATCGGGGGT
TGCCGCCTACAGAGCTAGTATACAACTATCCTTGATACTACAATTTCTTG
AGATAATCGAAATGCAGCAGACAGCAGCGCTCGTGGCGTTCATCCTTCGC
TGTACCCGTGCTGATGATGACGTCACGCCTTCATGCCACACGTCCCAATG
AGCATATGCCGTCTGATCACACAGTTCGTGCTGACTAGTTTCCCAGAGAA
GCACATTTCGGCGTTGTAGTATCGAGCAGTTTTGCCCGCAGCTCGTTTTG
TCCCGTTCAGTTTTTTGCTCCCACGTGCGCCCGATCAAAAAATTAACATC
CGAGCCCCAAACAGACTTCTGCAAGGTCCCAGGGTTTTTGCTCTTTCCCT
GCGGCATTCTTTTCGAGCCTTGTGATGTCCTCGGATTCCTTCACATGCAC
AGATGATTCGAGGACCAACCTATCTAACCTCAGGCCTGCGCTTTTGTAGA
GTCGGACCGGGTTCATAAGATTGACGACCTCTCTCCTTCCTTTTTTCACC
CCTTTCATCTTTCATCTTTCATCCTTACGCGTTTGGTTTGAATGTGTTGT
GTTTCTGTCGAAAAATAGTATTCGTCAAGCTTTTCATGTCAGGGATTCTG
GAAGGAAAAGACATGGAAAAGTACATCAACGCTCCGAACCTTCAGCTGGT
CGCAACCTCGATCTTGTTCGGCCTCAGGTACAGTACACCACAGTATATAG
CGTCAAACACACGCATATATGTATACACGTATACATCAACAATATATATA
TTGTTGATGTTGTTTTAGGTGTGTTTTGTCTTGTGTCTCTGCGTTATGTT
ACTTCCAATTAAAGTGCATGTGTCCTCGCAATCCGGCCATGTGGTGCTTG
CTGCACCCCTCATTTTGTTCTACTTCCTAAGATTGTATACGTTCTTACCT
ACGATACTTTCTGTGTTACAGTACACATGTCCATTGCATGCAAATAGTGG
GTGTGGGGAAAGATAGGCGAACAAAAACTGGGCCTTGATGAAACCTGAAG
AGGCAGCCAGCATCCGTTACTGTGCCGGGGGACTCTTGGCAGTGAACGCC
ATCGATTCGCTGTCGCGTGACCCGATGGCGTTTGACTGTACATGTGGATG
CCGTCGCGGAAAGCGGGAGAAATCCCGTGAGTAGGCACCAGATTCAGCCT
GAGTGTGTGGAGAATGAGTGGGCTGACGCGGGACGGGGCGGCCGAACTTG
TCTCTCGAAACCATCTCTGGCGCGAACGAGGACAGAAGGAAAATGATTTT
TCCTGGTCACCTGACCACAAGCAGAGAATTGGCTATCACACGTAACTGAC
CCATACTCTGCTGAATGTCTTGACCGTACATTCATATTTTTAACCGTGCT
ATCGGGCCCTGCCTTGCCAATGATTATAAGCTACGGTACGGTATTCGTGC
TTGTTCCCGCCATCCGGCCATTCGAGGATCTAGTGAACATGTGTAATCTG
TTGCTGTTGTCGAAGATGCGGACGATACGGCGAGCATTAAGATACACTAT
TTAATACTACAAAGTACCATTGCAGTCCCAGGTAGGTGTGTTTTACCGGT
GTACTCATGACTTTCGTTTGCCCGGCGCACTCGGCAGCGTGATCGACCCG
GTTCGAAGGCTCAAGTTCAGCCCAATGGCGCGGACGTCGGCGGCGATGGC
TCGCGCGGAGGCAAGAAGCGCCGCGGCGAGGCAAAGAAGACAAAGGTATA
AAAAACGCCGACTGCTGTTCTACCTGTACAGTAATAGTTACGGTGTCGTC
TATGGGTGTGTGGGGGGAAAAGGAGAGAGGACAAACATGAATTGGTCCCA
CGGAATTCGATGGACAGAAAGAACCCACCCACCCCATGAGTCGAAATGGT
TTTGCCAATCTTGCTTCTCGTGGTCAGATGTACAGGGAAGGATTATTTAT
TTTTTTCCGAGGAGACGGTAATACCCCCGCTTTGACATTATGCTGATGAT
GCAGATACTGTACTGTAGTAGCACTGCGTATACCGGAAACGGAAAGCATG
CCCGCAGGAGGTAAACAACTCGCTGGCTTCGCTGGGGGGCGTCGGCGGTA
GAGGTCGAGTCCTCTGATTACGCAGAACATTGATGTTGATAAGTTACACT
CTTAAAACACTAATAATAGAGCTTCTCTATTAGTTTTATTAATGTTTTTG
GCCAATTTGTAGCTCTCAAAACAGGGAGGACGGTAGCTGGGAACCATTCT
GTGACGAGATTTAGGGGTTTCAGACCGTTTATTTATGTGCGTGTCAATAT
CTTGAAAAGAAGTGCACGACTGCCCAACTTTGCAAACCTCTTATGGGATA
GTTGCGAGCCAAGGCCGTGAATAACCGCGTCCAAAAGATACGCAACCCAA
ATTAGCATTTTTCAAAGCACTGCCTAGCATGTTTTCATACCGGCACCTAA
TCCTCTCAATCCTGTGGCCGTAGGACCCATATAGCCCACGAACTAAGATC
ACATATACAATAGATAGTTGAATTTCATGCAGAAAAGTGTTAGTATGTCG
ACTTGACTCTTAAATCTAACGGGCCTCCTCCCGTTGCATACGCTAATTTT
GCCTAACTTTGTCATGATTTGGACGAAGGCGGGGCACCACGAGCCGAAGC
AGAGATCAGGTGTCCATGTCCAGGGGGGACAGCGCTTCTTCACAGCACAT
GTGGAACTACGAAAAGATCGCGGCGAACCCCGCAATGGCCGAGGCCTTCC
GACTCTTCGCTAACCGAGCGCTGTGCCAAGAGTCGGTGTGGTTCCTCGAG
GAGGTTTCAAGGTGTGCTTGTGTGTGTGTGTATTTTGCTCTCAAATATAT
TTTCAGTTGGAGACCAAATGTATCTACGATTGCAGACCAAATATATTTAC
AAATGCAGACCACATGTTGAACAATTGCAGACCAAATATATATACAATTG
ATGACCAAATATATTTACAATTGCAGACCAAAGACAACCGCGCAAATTCT
TAATTGGTTTACCGAGGAAATGTACTCTTGATTGTGTCTGTGCCCGTTTT
GCCGATATCGAACGCCGTCAAATTCTGTCGACCGCATTTCCCCCATCAAT
ATACGTCCTCTCAGGTATCAAAACGAAGACTATACGATAGCGTCGCCGCT
GGGCTGTGGACAGATTGCCGCTTTCGAGGCGATCACGAAGCGATTCATCG
CTGACGGTGCGCCGGATGAAGTCAGCCTCTGGTAAGTCCTACGCCTTAGA
GAGAGGGGGGAGGGAGATGCACGCAACCCCGCCCCCAACTCAAACTCCCC
CTCCCGTTGCCTTCGAGTTTTAACGAATGTATTTTAAAGTGTTTTTAGAA
ACGAGTGTATACCCCTGTATCTGAGGCCGATTGCCGTTTAGAGAAATAAT
ATAAGCATCGCCGTGATATGTAGTTACTGCATTGCGGGCGGGTGAATCGC
TATTGAGACGCAGGAAAAGTCGTGGCTTTTGGGGGGAGATGAGGGTTGGG
TGTGTAGAGGGCGTACAGGAGAGTTGGAAGTAGATAATTAGATCGGAGAC
GACATTCCAATGCGCTAGTAGTTATATTCATAGGTGAATTTGTCGTTGAT
TGAAGTGGTATCAGCCGAAGACTTGATTTCTGGTCGTGATGGTCACCTCG
CCATTTCAAGGCTAAGCCATTGACTCTTGATGTGTCTCGGCTGTCCGATG
TGTCTCCGCAGCTCCAAGGAGAAGAAAGAGATTCTGAACATGTACACCAA
ACCCAACGATCCTTTCGACGACGAGGAAGAGCTGAGGTGCGAAGACGTGC
TCGAACTTTGCGAGCTAGTATCGAAAATCCGCTGTAGCCTATATTTTTAC
TTGGAAGCAGTATAGTGTTAATGTGTGTCATGAAAACCAACCCTTGGTGG
CAACACCTCTGTCTCTTTAACCGTTATGTTTTTCCCGCTACTCCTTTCAT
TGTCATATCTCCCCTCTCAGTGGTGCTTTCAACCAAGCCTACTCGGAGAT
CCGCTACATGATCGAGTCGAACATCCTCCACAAGTTCACGGAAACGGACG
AGTTCCGCAAGGCCGTCAACAAGCGACCTCACAGCCGTCGGAAACAGGGC
TTGCTTTTCGCCTGCTAA
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Coding sequence (CDS) from alignment at P-canaliculata_contig9777:190..5857+

>mRNA_P-canaliculata_contig9777.23876.1 ID=mRNA_P-canaliculata_contig9777.23876.1|Name=mRNA_P-canaliculata_contig9777.23876.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1932bp|location=Sequence derived from alignment at P-canaliculata_contig9777:190..5857+ (Pelvetia canaliculata dioecious)
ATGGGTGTAATCGCCCTGATTATTCCTCTCTACTACCACTTTACCATCAC
CGGGGAAAATGCTACCACATGGGTGTAATCGCCCTGATTATTCCTCTCTA
CTACCACTTTACCATCACCGGGGAAAATGCTACCACGGATTTTCGACAGA
CGCAGGAAAATAACATTTGGACGTGCACCCTCGTGCTGCAAGTGCTCCAG
CTGTGCCTACTTCCTGTGGTGTGGGATTTTCGACAGACGCAGGAAAATAA
CATTTGGACGTGCACCCTCGTGCTGCAAGTGCTCCAGCTGTGCCTACTTC
CTGTGGTGTGGATGATCGATGACCTCTTTCAAATCAGCAGGGAGTTGATC
GTGATCATCGTGGTGGGGACCATACAGAGCGGATGATCGATGACCTCTTT
CAAATCAGCAGGGAGTTGATCGTGATCATCGTGGTGGGGACCATACAGAG
CGTATTCGTCAAGCTTTTCATGTCAGGGATTCTGGAAGGAAAAGACATGG
AAAAGTACATCAACGCTCCGAACCTTCAGCTGGTCGCAACCTCGATCTTG
TTCGGCCTCAGTATTCGTCAAGCTTTTCATGTCAGGGATTCTGGAAGGAA
AAGACATGGAAAAGTACATCAACGCTCCGAACCTTCAGCTGGTCGCAACC
TCGATCTTGTTCGGCCTCAGCGTGATCGACCCGGTTCGAAGGCTCAAGTT
CAGCCCAATGGCGCGGACGTCGGCGGCGATGGCTCGCGCGGAGGCAAGAA
GCGCCGCGGCGAGGCAAAGAAGACAAAGCGTGATCGACCCGGTTCGAAGG
CTCAAGTTCAGCCCAATGGCGCGGACGTCGGCGGCGATGGCTCGCGCGGA
GGCAAGAAGCGCCGCGGCGAGGCAAAGAAGACAAAGGCGGGGCACCACGA
GCCGAAGCAGAGATCAGGTGTCCATGTCCAGGGGGGACAGCGCTTCTTCA
CAGCACATGTGGAACTACGAAAAGATCGCGGCGAACCCCGCAATGGCCGA
GGCCTTCCGACTCTTCGCTAACCGAGCGCTGTGCCAAGAGTCGGTGTGGT
TCCTCGAGGAGGTTTCAAGGCGGGGCACCACGAGCCGAAGCAGAGATCAG
GTGTCCATGTCCAGGGGGGACAGCGCTTCTTCACAGCACATGTGGAACTA
CGAAAAGATCGCGGCGAACCCCGCAATGGCCGAGGCCTTCCGACTCTTCG
CTAACCGAGCGCTGTGCCAAGAGTCGGTGTGGTTCCTCGAGGAGGTTTCA
AGGTATCAAAACGAAGACTATACGATAGCGTCGCCGCTGGGCTGTGGACA
GATTGCCGCTTTCGAGGCGATCACGAAGCGATTCATCGCTGACGGTGCGC
CGGATGAAGTCAGCCTCTGGTATCAAAACGAAGACTATACGATAGCGTCG
CCGCTGGGCTGTGGACAGATTGCCGCTTTCGAGGCGATCACGAAGCGATT
CATCGCTGACGGTGCGCCGGATGAAGTCAGCCTCTGCTCCAAGGAGAAGA
AAGAGATTCTGAACATGTACACCAAACCCAACGATCCTTTCGACGACGAG
GAAGAGCTGAGCTCCAAGGAGAAGAAAGAGATTCTGAACATGTACACCAA
ACCCAACGATCCTTTCGACGACGAGGAAGAGCTGAGTGGTGCTTTCAACC
AAGCCTACTCGGAGATCCGCTACATGATCGAGTCGAACATCCTCCACAAG
TTCACGGAAACGGACGAGTTCCGCAAGGCCGTCAACAAGCGACCTCACAG
CCGTCGGAAACAGGGCTTGCTTTTCGCCTGCTAATGGTGCTTTCAACCAA
GCCTACTCGGAGATCCGCTACATGATCGAGTCGAACATCCTCCACAAGTT
CACGGAAACGGACGAGTTCCGCAAGGCCGTCAACAAGCGACCTCACAGCC
GTCGGAAACAGGGCTTGCTTTTCGCCTGCTAA
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