prot_P-canaliculata_contig97641.23864.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig97641.23864.1
Unique Nameprot_P-canaliculata_contig97641.23864.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length263
Homology
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BLAST of mRNA_P-canaliculata_contig97641.23864.1 vs. uniprot
Match: A0A848U7Q7_9GAMM (Uncharacterized protein n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848U7Q7_9GAMM)

HSP 1 Score: 82.8 bits (203), Expect = 1.650e-16
Identity = 46/105 (43.81%), Postives = 62/105 (59.05%), Query Frame = 0 
Query:  155 LVEHEDPSVRRRSVDTLSRWTRDPAHEPLIVDALDDADAGVREAAVYALAGRPAAGQDVRGELLTLIENGGEDEGVRRGAVLALNRMPLDDVERRRVQAVERELA 259
            L  HED +VR  S+  LSRW+ D    P+++DAL D + GVR++A YAL G     Q V   L  +  + G+ +  R  AVLAL  M L D +RR + AV+RELA
Sbjct:    1 LTSHEDAAVRSISLSILSRWSTDGRDTPVLLDALQDTEQGVRQSAAYALVGHEVVNQSVIDSLWAVAVDDGDTKATRSAAVLALRGMQLSDAQRRDLAAVQRELA 105
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97641.23864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A848U7Q7_9GAMM1.650e-1643.81Uncharacterized protein n=1 Tax=Granulosicoccus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 34..261
e-value: 1.4E-17
score: 66.0
NoneNo IPR availablePFAMPF13646HEAT_2coord: 153..238
e-value: 6.4E-11
score: 42.5
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 44..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97641contigP-canaliculata_contig97641:21..809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97641.23864.1mRNA_P-canaliculata_contig97641.23864.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig97641 21..809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig97641.23864.1 ID=prot_P-canaliculata_contig97641.23864.1|Name=mRNA_P-canaliculata_contig97641.23864.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=263bp
SVTAAAAGTATVGHDPIDPRELGREPLTDAEHAALLDRLSRDPVLLAALI
DEFRSETDRRRLRRLAGVLDDVNDPAVGLLAAELVYSADASQRQVGLELL
GQVSSGDGQARDIASGLLSSETDGDVLVGALNVLSRPGNVDDDTRASLAG
QVALLVEHEDPSVRRRSVDTLSRWTRDPAHEPLIVDALDDADAGVREAAV
YALAGRPAAGQDVRGELLTLIENGGEDEGVRRGAVLALNRMPLDDVERRR
VQAVERELARRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold