Homology
BLAST of mRNA_P-canaliculata_contig102300.365.1 vs. uniprot
Match:
A0A357IBD8_9GAMM (Cold shock domain protein CspD n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A357IBD8_9GAMM)
HSP 1 Score: 56.2 bits (134), Expect = 2.130e-9
Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 0
Query: 1 MSSKSEVTVKWFNVEKSYGFAVNDAGEDVFIHYRSIQMVGLR 42
MS +S TVKWF+ K YGF VN GEDVF+HYRSIQ G +
Sbjct: 1 MSERSNGTVKWFDNAKGYGFIVNPDGEDVFVHYRSIQGDGYK 42
BLAST of mRNA_P-canaliculata_contig102300.365.1 vs. uniprot
Match:
A0A352KLI8_9GAMM (Cold-shock protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A352KLI8_9GAMM)
HSP 1 Score: 55.5 bits (132), Expect = 4.290e-9
Identity = 25/42 (59.52%), Postives = 28/42 (66.67%), Query Frame = 0
Query: 1 MSSKSEVTVKWFNVEKSYGFAVNDAGEDVFIHYRSIQMVGLR 42
MS + + VKWFN K YGF D GEDVF+HYRSIQ G R
Sbjct: 1 MSVREKGVVKWFNNSKGYGFITRDQGEDVFVHYRSIQGDGFR 42
BLAST of mRNA_P-canaliculata_contig102300.365.1 vs. uniprot
Match:
A0A7V2PUH6_9CHLR (Cold shock domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V2PUH6_9CHLR)
HSP 1 Score: 55.1 bits (131), Expect = 5.950e-9
Identity = 25/43 (58.14%), Postives = 28/43 (65.12%), Query Frame = 0
Query: 1 MSSKSEVTVKWFNVEKSYGFAVNDAGEDVFIHYRSIQMVGLRR 43
MS + TVKWFN K YGF + GEDVF+HY SI M G RR
Sbjct: 1 MSERLTGTVKWFNARKGYGFIGYEEGEDVFVHYSSIDMEGYRR 43
BLAST of mRNA_P-canaliculata_contig102300.365.1 vs. uniprot
Match:
UPI001E5969DE (cold-shock protein n=1 Tax=Longispora fulva TaxID=619741 RepID=UPI001E5969DE)
HSP 1 Score: 54.7 bits (130), Expect = 1.260e-8
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query: 3 SKSEVTVKWFNVEKSYGFAVNDAGEDVFIHYRSIQMVGLR 42
S +E TVKWFN EK YGF D G+DVF+H+ SIQM G +
Sbjct: 19 SVAEGTVKWFNSEKGYGFIAVDGGQDVFVHFSSIQMDGYK 58
BLAST of mRNA_P-canaliculata_contig102300.365.1 vs. uniprot
Match:
A0A1E4ZWN7_9GAMM (CSD domain-containing protein n=1 Tax=Chromatiales bacterium (ex Bugula neritina AB1) TaxID=1868282 RepID=A0A1E4ZWN7_9GAMM)
HSP 1 Score: 53.9 bits (128), Expect = 1.700e-8
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 0
Query: 4 KSEVTVKWFNVEKSYGFAVNDAGEDVFIHYRSI 36
KS TVKWF+ K YGF VN+AGEDVF+HYRSI
Sbjct: 3 KSIGTVKWFDNAKGYGFIVNEAGEDVFVHYRSI 35
BLAST of mRNA_P-canaliculata_contig102300.365.1 vs. uniprot
Match:
A0A1H0RPX6_MICTS (Cold-shock DNA-binding protein family n=8 Tax=Microbacteriaceae TaxID=85023 RepID=A0A1H0RPX6_MICTS)
HSP 1 Score: 53.5 bits (127), Expect = 2.250e-8
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0
Query: 8 TVKWFNVEKSYGFAVNDAGEDVFIHYRSIQMVGLR 42
TVKWFN EK +GF D G+DVF+HY SI+M G R
Sbjct: 5 TVKWFNAEKGFGFITVDDGQDVFVHYSSIEMSGFR 39
BLAST of mRNA_P-canaliculata_contig102300.365.1 vs. uniprot
Match:
A0A2M9E9Z1_9GAMM (Cold-shock protein n=7 Tax=Xanthomonadaceae TaxID=32033 RepID=A0A2M9E9Z1_9GAMM)
HSP 1 Score: 53.5 bits (127), Expect = 2.420e-8
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0
Query: 1 MSSKSEVTVKWFNVEKSYGFAVNDAGEDVFIHYRSIQMVGLR 42
MS + TVKWFN K +GF ++GEDVF+H+R+IQM G +
Sbjct: 1 MSDRETGTVKWFNDAKGFGFISRESGEDVFVHFRAIQMQGFK 42
BLAST of mRNA_P-canaliculata_contig102300.365.1 vs. uniprot
Match:
UPI001CE3EDC5 (cold shock domain-containing protein n=1 Tax=Pseudoclavibacter sp. Marseille-Q3772 TaxID=2866588 RepID=UPI001CE3EDC5)
HSP 1 Score: 53.5 bits (127), Expect = 2.480e-8
Identity = 25/39 (64.10%), Postives = 28/39 (71.79%), Query Frame = 0
Query: 8 TVKWFNVEKSYGFAVND----AGEDVFIHYRSIQMVGLR 42
TVKWFN EK YGF D AG+DVF+HYRSI+M G R
Sbjct: 5 TVKWFNAEKGYGFITVDSADAAGQDVFVHYRSIEMDGFR 43
BLAST of mRNA_P-canaliculata_contig102300.365.1 vs. uniprot
Match:
A0A1B3WBV0_9GAMM (Cold-shock protein n=3 Tax=Xanthomonadaceae TaxID=32033 RepID=A0A1B3WBV0_9GAMM)
HSP 1 Score: 53.1 bits (126), Expect = 3.690e-8
Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 0
Query: 1 MSSKSEVTVKWFNVEKSYGFAVNDAGEDVFIHYRSIQMVGLR 42
M+ + TVKWFN K +GF D+GEDVF+H+R+IQM G +
Sbjct: 3 MAEREIGTVKWFNDAKGFGFISRDSGEDVFVHFRAIQMPGFK 44
BLAST of mRNA_P-canaliculata_contig102300.365.1 vs. uniprot
Match:
A0A6N7GPF5_9ACTN (Cold-shock protein n=4 Tax=Micromonosporaceae TaxID=28056 RepID=A0A6N7GPF5_9ACTN)
HSP 1 Score: 52.8 bits (125), Expect = 4.880e-8
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0
Query: 8 TVKWFNVEKSYGFAVNDAGEDVFIHYRSIQMVGLR 42
TVKWFN EK YGF D GEDVF+H+ SI+M G +
Sbjct: 5 TVKWFNSEKGYGFIAVDGGEDVFVHFSSIEMDGYK 39
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102300.365.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 25
M S S K S E V T V K W F N V E K S Y G F A V N D A G E D V F I H Y R S I Q M V G L R R * 5 10 15 20 25 30 35 40 Expect = 2.13e-9 / Id = 61.90 Expect = 4.29e-9 / Id = 59.52 Expect = 5.95e-9 / Id = 58.14 Expect = 1.26e-8 / Id = 60.00 Expect = 1.70e-8 / Id = 72.73 Expect = 2.25e-8 / Id = 62.86 Expect = 2.42e-8 / Id = 52.38 Expect = 2.48e-8 / Id = 64.10 Expect = 3.69e-8 / Id = 52.38 Expect = 4.88e-8 / Id = 62.86 Sequence A0A357IBD8_9GAMM A0A352KLI8_9GAMM A0A7V2PUH6_9CHLR UPI001E5969DE A0A1E4ZWN7_9GAMM A0A1H0RPX6_MICTS A0A2M9E9Z1_9GAMM UPI001CE3EDC5 A0A1B3WBV0_9GAMM A0A6N7GPF5_9ACTN
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