prot_P-canaliculata_contig102292.362.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig102292.362.1
Unique Nameprot_P-canaliculata_contig102292.362.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length55
Homology
BLAST of mRNA_P-canaliculata_contig102292.362.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 4.290e-13
Identity = 39/58 (67.24%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 MEVSAFKTAPGLSVSKEVKGAT----VYNDPLDWWRKKEREYPLLAALARRVLAIPAS 54
            MEVSAFK APG+ V    K  T    V+N+PLD WRKK+ EYPLLAALARRVLAIP+S
Sbjct:  453 MEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSS 510          
BLAST of mRNA_P-canaliculata_contig102292.362.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.100e-12
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 MEVSAFKTAPGLSVSK-EVKGATVYNDPLDWWRKKEREYPLLAALARRVLAIPAS 54
            +EV++F+T PG+S+      G  VYNDPLDWWR ++ E+P LAALARRVLAIP+S
Sbjct:  488 LEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSS 542          
BLAST of mRNA_P-canaliculata_contig102292.362.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 6.310e-10
Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    1 MEVSAFKTAPGLSVSKEVK-GATVYNDPLDWWRKKEREYPLLAALARRVLAIPAS 54
            +E++AFK + G+ + +E K GA VY DPLDWWR +  ++P LA LARRVLAIPA+
Sbjct:  196 VELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPAT 250          
BLAST of mRNA_P-canaliculata_contig102292.362.1 vs. uniprot
Match: A0A0M8NXU4_9EURO (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Penicillium nordicum TaxID=229535 RepID=A0A0M8NXU4_9EURO)

HSP 1 Score: 48.9 bits (115), Expect = 3.190e-5
Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 0
Query:   14 VSKEVKGATVYNDPLDWWRKKEREYPLLAALARRVLAIPAS 54
            +S+ +K  TV  DPL +WR+ ER+YP+LA+LAR +L IPA+
Sbjct:  114 LSQYLKNGTVEVDPLTFWRENERQYPVLASLARDILFIPAT 154          
BLAST of mRNA_P-canaliculata_contig102292.362.1 vs. uniprot
Match: UPI001470A045 (zinc finger BED domain-containing protein 1-like isoform X1 n=2 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI001470A045)

HSP 1 Score: 47.8 bits (112), Expect = 6.020e-5
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 0
Query:   19 KGATVYNDPLDWWRKKEREYPLLAALARRVLAIPAS 54
            K A + ++PL+WWR  E+EYPLLA LA+R L +P +
Sbjct:  132 KPAGLNDNPLNWWRSNEKEYPLLACLAKRYLCVPGT 167          
BLAST of mRNA_P-canaliculata_contig102292.362.1 vs. uniprot
Match: A0A2I4C1R9_9TELE (uncharacterized protein LOC106524616 isoform X1 n=3 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4C1R9_9TELE)

HSP 1 Score: 47.8 bits (112), Expect = 8.420e-5
Identity = 21/42 (50.00%), Postives = 31/42 (73.81%), Query Frame = 0
Query:   12 LSVSKEVKGATVYNDPLDWWRKKEREYPLLAALARRVLAIPA 53
            +SV +  KGA++  +PL WWR+K  ++PLLA++AR  LA PA
Sbjct: 1086 MSVFRADKGASLGVEPLQWWRRKAAQFPLLASVARAYLAAPA 1127          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102292.362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LCS5_ECTSI4.290e-1367.24Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE1.100e-1260.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWI1_9PHAE6.310e-1056.36Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A0M8NXU4_9EURO3.190e-553.66Dimer_Tnp_hAT domain-containing protein n=1 Tax=Pe... [more]
UPI001470A0456.020e-552.78zinc finger BED domain-containing protein 1-like i... [more]
A0A2I4C1R9_9TELE8.420e-550.00uncharacterized protein LOC106524616 isoform X1 n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 26..54
e-value: 6.8E-9
score: 35.4
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 26..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig102292contigP-canaliculata_contig102292:479..643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig102292.362.1mRNA_P-canaliculata_contig102292.362.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig102292 227..742 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig102292.362.1 ID=prot_P-canaliculata_contig102292.362.1|Name=mRNA_P-canaliculata_contig102292.362.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=55bp
MEVSAFKTAPGLSVSKEVKGATVYNDPLDWWRKKEREYPLLAALARRVLA
IPAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf