prot_P-canaliculata_contig10226.359.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10226.359.1
Unique Nameprot_P-canaliculata_contig10226.359.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length92
Homology
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match: D7FKW1_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW1_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.930e-38
Identity = 69/90 (76.67%), Postives = 82/90 (91.11%), Query Frame = 0
Query:    1 MHLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIY 90
            M LARQD+DLEELGTHVERVGETA +INEELR QNR+LTALD+D++E TE MNFVMGRLGKLLKTKSKCQIWT+++LS + II+V ++IY
Sbjct:  161 MQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIY 250          
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match: A0A7S2S2P5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2P5_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 9.270e-24
Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 0
Query:    1 MHLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 91
            M + +QD+DLEELG  V+RV + A  IN EL+ QNRML  L+ DL+E TE+MNFVMG+L KLLKTK  CQIWTV+IL       +FL+IYT
Sbjct:   72 MIMEQQDEDLEELGYAVDRVNDMAVGINTELKTQNRMLKDLESDLDEATEKMNFVMGKLAKLLKTKDTCQIWTVIILFFXXXXXIFLLIYT 162          
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match: A0A7S2FMQ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FMQ2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 6.410e-23
Identity = 53/91 (58.24%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 MHLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 91
            M + +QD++LEELG  V+RV + A  INEEL+ QN+ML  L+ED++E  E+MNFVMG++ KLLKTK  CQIWTV+IL       VFLVIYT
Sbjct:  156 MIIRQQDEELEELGYAVDRVNDMAVGINEELKVQNQMLKTLEEDIDEAAEKMNFVMGKMAKLLKTKDTCQIWTVIILVXXXXXXVFLVIYT 246          
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match: A0A7S2S2M2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 6.410e-23
Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 0
Query:    1 MHLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 91
            M + +QD+DLEELG  V+RV + A  IN EL+ QNRML  L+ DL+E TE+MNFVMG+L KLLKTK  CQIWTV+IL       +FL+IYT
Sbjct:  156 MIMEQQDEDLEELGYAVDRVNDMAVGINTELKTQNRMLKDLESDLDEATEKMNFVMGKLAKLLKTKDTCQIWTVIILFFXXXXXIFLLIYT 246          
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match: A0A836CAK7_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK7_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.040e-21
Identity = 52/90 (57.78%), Postives = 62/90 (68.89%), Query Frame = 0
Query:    2 HLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 91
            H+ARQDQDLEELG HV+RVG  A  INEELR+Q RML  L+ED+  T E M  VMG + K+LKTK + QIW +V L        FLV+YT
Sbjct:  160 HIARQDQDLEELGEHVDRVGMHAETINEELRDQGRMLDDLNEDIVTTHESMGMVMGAMAKILKTKDRAQIWLIVTLVVXXXXXXFLVVYT 249          
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match: A0A067BS24_SAPPC (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BS24_SAPPC)

HSP 1 Score: 93.2 bits (230), Expect = 2.910e-21
Identity = 48/89 (53.93%), Postives = 67/89 (75.28%), Query Frame = 0
Query:    3 LARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 91
            +  QD+DL+EL T V R+G+ A  IN E++ QN ML  +D DL++TTERMNFVMG++ +LLKTK  CQ+  ++ L+ + +IMVFLVIYT
Sbjct:  161 IKEQDKDLDELHTSVSRLGQVAVTINSEIKSQNDMLKDVDADLDDTTERMNFVMGKMSRLLKTKDTCQLGGIIFLTIVLLIMVFLVIYT 249          
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match: A0A4D9DA67_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA67_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.080e-20
Identity = 46/88 (52.27%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    3 LARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIY 90
            L  QD+ LEELGT V+RVG  A+ +N+EL  QNRML  L+ ++E T E+M+FVMG+L KLLKTK K Q+W +++L+ + I+++ L IY
Sbjct:  157 LCEQDEGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMSFVMGKLSKLLKTKDKYQLWLIIVLTVVLIVLILLTIY 244          
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match: A0A8J2AWH8_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2AWH8_9DINO)

HSP 1 Score: 89.4 bits (220), Expect = 1.600e-19
Identity = 47/87 (54.02%), Postives = 65/87 (74.71%), Query Frame = 0
Query:    3 LARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVI 89
            +A+QD+ L EL    ER+ +TA +IN EL EQ RMLT LDED++  TE+MNFVM RLG L+KT +  Q+WT++IL C+F+ ++ LVI
Sbjct:  199 VAKQDEQLNELSKCTERLNQTALVINTELNEQARMLTELDEDIDRETEKMNFVMRRLGILMKTSNSKQLWTILILFCVFMFLLMLVI 285          
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match: A0A813HEU1_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HEU1_POLGL)

HSP 1 Score: 84.0 bits (206), Expect = 4.400e-19
Identity = 43/89 (48.31%), Postives = 66/89 (74.16%), Query Frame = 0
Query:    3 LARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 91
            +++QD+ L++L    +R+G TA IIN ELREQ +ML ALDED+++ TE++NFVM R+G+LLKT    Q+  ++ L  L ++++FLVI T
Sbjct:   20 VSQQDEALDQLSASAQRLGNTAQIINSELREQQKMLEALDEDIDKETEKLNFVMKRMGRLLKTSDNKQLCLIIGLIALIVVLIFLVINT 108          
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Match: A0A1V9ZQ80_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ80_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 6.590e-19
Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = 0
Query:    3 LARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTERMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT 91
            +  QD  L++L T V R+G  A  IN E++ QN ML  ++ DL++TTERMNFVM R+ KLLKTK  CQ+  ++IL+ + +IMVFLVIYT
Sbjct:  160 IKEQDTSLDQLHTSVTRIGHVAVAINTEIKSQNVMLKDVEADLDDTTERMNFVMARMSKLLKTKDTCQLSGIIILTIVLMIMVFLVIYT 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10226.359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKW1_ECTSI1.930e-3876.67Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A7S2S2P5_9STRA9.270e-2459.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2FMQ2_9STRA6.410e-2358.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2S2M2_9STRA6.410e-2359.34Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836CAK7_9STRA1.040e-2157.78Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A067BS24_SAPPC2.910e-2153.93t-SNARE coiled-coil homology domain-containing pro... [more]
A0A4D9DA67_9STRA2.080e-2052.27t-SNARE coiled-coil homology domain-containing pro... [more]
A0A8J2AWH8_9DINO1.600e-1954.02Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A813HEU1_POLGL4.400e-1948.31Hypothetical protein (Fragment) n=2 Tax=Polarella ... [more]
A0A1V9ZQ80_9STRA6.590e-1952.81t-SNARE coiled-coil homology domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 24..51
NoneNo IPR availableGENE3D1.20.5.110coord: 7..70
e-value: 1.4E-16
score: 62.2
NoneNo IPR availablePANTHERPTHR12791:SF47coord: 4..91
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..90
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..91
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 3..63
NoneNo IPR availableTMHMMTMhelixcoord: 71..90
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 37..88
e-value: 3.1E-9
score: 36.7
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 1..62
score: 10.603
IPR039897BET1-like proteinPANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 4..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10226contigP-canaliculata_contig10226:6622..7918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10226.359.1mRNA_P-canaliculata_contig10226.359.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10226 6622..7921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10226.359.1 ID=prot_P-canaliculata_contig10226.359.1|Name=mRNA_P-canaliculata_contig10226.359.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=92bp
MHLARQDQDLEELGTHVERVGETANIINEELREQNRMLTALDEDLEETTE
RMNFVMGRLGKLLKTKSKCQIWTVVILSCLFIIMVFLVIYT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR039897BET1