prot_P-canaliculata_contig10221.350.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10221.350.1
Unique Nameprot_P-canaliculata_contig10221.350.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length99
Homology
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: A0A6A6PLG2_9PEZI (Putative 60S ribosomal protein L38 n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PLG2_9PEZI)

HSP 1 Score: 108 bits (271), Expect = 2.550e-29
Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 0
Query:   22 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 87
            MPREI DIKTFIEICRRKDA S R+KK+K G TTQTKFKVRC RYLYTLVLKD+DKA+KL+QSLPP
Sbjct:    1 MPREIQDIKTFIEICRRKDASSTRVKKNKIGNTTQTKFKVRCKRYLYTLVLKDSDKADKLRQSLPP 66          
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: UPI000CE262DF (60S ribosomal protein L38-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE262DF)

HSP 1 Score: 108 bits (269), Expect = 3.010e-28
Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 0
Query:   15 PHQSSPTMPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 87
            P   SP MP++I DIKTFIE+CRRKDA SARIKKS+  AT QTKFKVRC RYLYTLVLKD+DKA+KLKQSLPP
Sbjct:   40 PKSKSPNMPQQISDIKTFIELCRRKDASSARIKKSR--ATGQTKFKVRCQRYLYTLVLKDSDKADKLKQSLPP 110          
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: A0A6J3M7K0_9PEZI (ribosomal protein L38e n=1 Tax=Dissoconium aciculare CBS 342.82 TaxID=1314786 RepID=A0A6J3M7K0_9PEZI)

HSP 1 Score: 105 bits (263), Expect = 6.570e-28
Identity = 57/66 (86.36%), Postives = 59/66 (89.39%), Query Frame = 0
Query:   22 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 87
            MPREI DIKTFIEICRRKDA SARIKK+K   T QTKFKVRC RYLYTLVLKD+DKAEKLKQSLPP
Sbjct:    1 MPREISDIKTFIEICRRKDASSARIKKNK--VTNQTKFKVRCQRYLYTLVLKDSDKAEKLKQSLPP 64          
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: M3ATF7_PSEFD (Uncharacterized protein n=2 Tax=Pseudocercospora TaxID=131324 RepID=M3ATF7_PSEFD)

HSP 1 Score: 105 bits (261), Expect = 1.400e-27
Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 0
Query:   22 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 87
            MP+E+ DIK+FIEICRRKDA SARIKK+K G   QTKFKVRC+R+LYTLVLKD+DKAEKLKQSLPP
Sbjct:    1 MPKEVTDIKSFIEICRRKDASSARIKKNKVGNKEQTKFKVRCHRFLYTLVLKDSDKAEKLKQSLPP 66          
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: A0A4S2MQ18_9PEZI (Uncharacterized protein n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2MQ18_9PEZI)

HSP 1 Score: 104 bits (259), Expect = 5.450e-27
Identity = 52/67 (77.61%), Postives = 62/67 (92.54%), Query Frame = 0
Query:   21 TMPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 87
            TMP+++HDIK FIE+CRRKDA++ARIKKS KG++ Q KFKVRC+R+LYTLVLKD DKAEKLKQSLPP
Sbjct:   33 TMPKQVHDIKQFIELCRRKDAKAARIKKSTKGSS-QVKFKVRCHRHLYTLVLKDTDKAEKLKQSLPP 98          
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: M2Y1U8_DOTSN (Uncharacterized protein n=1 Tax=Dothistroma septosporum (strain NZE10 / CBS 128990) TaxID=675120 RepID=M2Y1U8_DOTSN)

HSP 1 Score: 103 bits (256), Expect = 7.650e-27
Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = 0
Query:   22 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 87
            MP+EI+DIK FIE+CRRKDA SARIKK+K  AT QTKFKVRC RYLYTL LKD+DKAEKLKQSLPP
Sbjct:    1 MPKEINDIKAFIEVCRRKDASSARIKKNK--ATNQTKFKVRCQRYLYTLTLKDSDKAEKLKQSLPP 64          
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: A0A2T3BAA8_AMORE (Uncharacterized protein n=1 Tax=Amorphotheca resinae ATCC 22711 TaxID=857342 RepID=A0A2T3BAA8_AMORE)

HSP 1 Score: 102 bits (254), Expect = 1.380e-26
Identity = 56/67 (83.58%), Postives = 59/67 (88.06%), Query Frame = 0
Query:   22 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPPS 88
            MPREI DIK FIEICRRKDA SARIK+SKK  TT  KFKVRC R+LYTLVLKDA+KAEKLKQSLPPS
Sbjct:    1 MPREISDIKNFIEICRRKDASSARIKRSKK--TTHIKFKVRCQRHLYTLVLKDAEKAEKLKQSLPPS 65          
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: A0A5N5D1K0_9PEZI (60S ribosomal protein L38 n=5 Tax=Botryosphaeriaceae TaxID=45131 RepID=A0A5N5D1K0_9PEZI)

HSP 1 Score: 102 bits (254), Expect = 1.420e-26
Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = 0
Query:   22 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 87
            MP E+ DIK FIEICRRKDA SARIKK+KK +  QTKFKVRC+RYLYTLVLKD+DKAEKLKQSLPP
Sbjct:    1 MPSEVSDIKQFIEICRRKDASSARIKKNKKNS--QTKFKVRCHRYLYTLVLKDSDKAEKLKQSLPP 64          
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: M2LC23_BAUPA (Uncharacterized protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2LC23_BAUPA)

HSP 1 Score: 102 bits (254), Expect = 1.540e-26
Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 0
Query:   22 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPPS 88
            MP+E+ DIKTFIEICRRKDA SARIKK++  AT QTKFKVRC RYLYTLVLKD+DKAEKL+QSLPP+
Sbjct:    1 MPQEVSDIKTFIEICRRKDASSARIKKNR--ATHQTKFKVRCKRYLYTLVLKDSDKAEKLRQSLPPN 65          
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: A0A2G5HEG9_CERBT (60S ribosomal protein L38 n=4 Tax=Cercospora TaxID=29002 RepID=A0A2G5HEG9_CERBT)

HSP 1 Score: 102 bits (253), Expect = 2.320e-26
Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 0
Query:   22 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 87
            MPRE+ DIK+FIEICRRKDA SARIKK++     QTKFKVRC R+LYTLVLKD DKAEKLKQSLPP
Sbjct:    1 MPREVTDIKSFIEICRRKDASSARIKKNRSAGINQTKFKVRCQRHLYTLVLKDNDKAEKLKQSLPP 66          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A6PLG2_9PEZI2.550e-2983.33Putative 60S ribosomal protein L38 n=1 Tax=Neohort... [more]
UPI000CE262DF3.010e-2878.0860S ribosomal protein L38-like n=1 Tax=Quercus sub... [more]
A0A6J3M7K0_9PEZI6.570e-2886.36ribosomal protein L38e n=1 Tax=Dissoconium acicula... [more]
M3ATF7_PSEFD1.400e-2780.30Uncharacterized protein n=2 Tax=Pseudocercospora T... [more]
A0A4S2MQ18_9PEZI5.450e-2777.61Uncharacterized protein n=1 Tax=Ascodesmis nigrica... [more]
M2Y1U8_DOTSN7.650e-2781.82Uncharacterized protein n=1 Tax=Dothistroma septos... [more]
A0A2T3BAA8_AMORE1.380e-2683.58Uncharacterized protein n=1 Tax=Amorphotheca resin... [more]
A0A5N5D1K0_9PEZI1.420e-2681.8260S ribosomal protein L38 n=5 Tax=Botryosphaeriace... [more]
M2LC23_BAUPA1.540e-2680.60Uncharacterized protein n=1 Tax=Baudoinia panameri... [more]
A0A2G5HEG9_CERBT2.320e-2678.7960S ribosomal protein L38 n=4 Tax=Cercospora TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002675Ribosomal protein L38ePFAMPF01781Ribosomal_L38ecoord: 23..88
e-value: 2.4E-32
score: 110.8
IPR002675Ribosomal protein L38ePANTHERPTHR1096560S RIBOSOMAL PROTEIN L38coord: 22..88
IPR038464Ribosomal protein L38e superfamilyGENE3D3.30.720.90coord: 22..91
e-value: 1.9E-32
score: 113.2
NoneNo IPR availablePANTHERPTHR10965:SF0RIBOSOMAL PROTEIN L38coord: 22..88
NoneNo IPR availablePRODOMPD010361coord: 22..88
e-value: 4.0E-23
score: 261.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10221contigP-canaliculata_contig10221:4658..5025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10221.350.1mRNA_P-canaliculata_contig10221.350.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10221 4658..5025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10221.350.1 ID=prot_P-canaliculata_contig10221.350.1|Name=mRNA_P-canaliculata_contig10221.350.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=99bp
GHNTSTRTTYRRQTPHQSSPTMPREIHDIKTFIEICRRKDARSARIKKSK
KGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPPSEPSPRSQRLPG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002675Ribosomal_L38e
IPR038464Ribosomal_L38e_sf