mRNA_P-canaliculata_contig10221.350.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: A0A6A6PLG2_9PEZI (Putative 60S ribosomal protein L38 n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PLG2_9PEZI) HSP 1 Score: 108 bits (271), Expect = 2.550e-29 Identity = 55/66 (83.33%), Postives = 60/66 (90.91%), Query Frame = 1 Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261 MPREI DIKTFIEICRRKDA S R+KK+K G TTQTKFKVRC RYLYTLVLKD+DKA+KL+QSLPP Sbjct: 1 MPREIQDIKTFIEICRRKDASSTRVKKNKIGNTTQTKFKVRCKRYLYTLVLKDSDKADKLRQSLPP 66
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: UPI000CE262DF (60S ribosomal protein L38-like n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE262DF) HSP 1 Score: 108 bits (269), Expect = 3.010e-28 Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 1 Query: 43 PHQSSPTMPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261 P SP MP++I DIKTFIE+CRRKDA SARIKKS+ AT QTKFKVRC RYLYTLVLKD+DKA+KLKQSLPP Sbjct: 40 PKSKSPNMPQQISDIKTFIELCRRKDASSARIKKSR--ATGQTKFKVRCQRYLYTLVLKDSDKADKLKQSLPP 110
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: A0A6J3M7K0_9PEZI (ribosomal protein L38e n=1 Tax=Dissoconium aciculare CBS 342.82 TaxID=1314786 RepID=A0A6J3M7K0_9PEZI) HSP 1 Score: 105 bits (263), Expect = 6.570e-28 Identity = 57/66 (86.36%), Postives = 59/66 (89.39%), Query Frame = 1 Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261 MPREI DIKTFIEICRRKDA SARIKK+K T QTKFKVRC RYLYTLVLKD+DKAEKLKQSLPP Sbjct: 1 MPREISDIKTFIEICRRKDASSARIKKNK--VTNQTKFKVRCQRYLYTLVLKDSDKAEKLKQSLPP 64
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: M3ATF7_PSEFD (Uncharacterized protein n=2 Tax=Pseudocercospora TaxID=131324 RepID=M3ATF7_PSEFD) HSP 1 Score: 105 bits (261), Expect = 1.400e-27 Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 1 Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261 MP+E+ DIK+FIEICRRKDA SARIKK+K G QTKFKVRC+R+LYTLVLKD+DKAEKLKQSLPP Sbjct: 1 MPKEVTDIKSFIEICRRKDASSARIKKNKVGNKEQTKFKVRCHRFLYTLVLKDSDKAEKLKQSLPP 66
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: A0A4S2MQ18_9PEZI (Uncharacterized protein n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2MQ18_9PEZI) HSP 1 Score: 104 bits (259), Expect = 5.450e-27 Identity = 52/67 (77.61%), Postives = 62/67 (92.54%), Query Frame = 1 Query: 61 TMPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261 TMP+++HDIK FIE+CRRKDA++ARIKKS KG++ Q KFKVRC+R+LYTLVLKD DKAEKLKQSLPP Sbjct: 33 TMPKQVHDIKQFIELCRRKDAKAARIKKSTKGSS-QVKFKVRCHRHLYTLVLKDTDKAEKLKQSLPP 98
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: M2Y1U8_DOTSN (Uncharacterized protein n=1 Tax=Dothistroma septosporum (strain NZE10 / CBS 128990) TaxID=675120 RepID=M2Y1U8_DOTSN) HSP 1 Score: 103 bits (256), Expect = 7.650e-27 Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = 1 Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261 MP+EI+DIK FIE+CRRKDA SARIKK+K AT QTKFKVRC RYLYTL LKD+DKAEKLKQSLPP Sbjct: 1 MPKEINDIKAFIEVCRRKDASSARIKKNK--ATNQTKFKVRCQRYLYTLTLKDSDKAEKLKQSLPP 64
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: A0A2T3BAA8_AMORE (Uncharacterized protein n=1 Tax=Amorphotheca resinae ATCC 22711 TaxID=857342 RepID=A0A2T3BAA8_AMORE) HSP 1 Score: 102 bits (254), Expect = 1.380e-26 Identity = 56/67 (83.58%), Postives = 59/67 (88.06%), Query Frame = 1 Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPPS 264 MPREI DIK FIEICRRKDA SARIK+SKK TT KFKVRC R+LYTLVLKDA+KAEKLKQSLPPS Sbjct: 1 MPREISDIKNFIEICRRKDASSARIKRSKK--TTHIKFKVRCQRHLYTLVLKDAEKAEKLKQSLPPS 65
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: A0A5N5D1K0_9PEZI (60S ribosomal protein L38 n=5 Tax=Botryosphaeriaceae TaxID=45131 RepID=A0A5N5D1K0_9PEZI) HSP 1 Score: 102 bits (254), Expect = 1.420e-26 Identity = 54/66 (81.82%), Postives = 59/66 (89.39%), Query Frame = 1 Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261 MP E+ DIK FIEICRRKDA SARIKK+KK + QTKFKVRC+RYLYTLVLKD+DKAEKLKQSLPP Sbjct: 1 MPSEVSDIKQFIEICRRKDASSARIKKNKKNS--QTKFKVRCHRYLYTLVLKDSDKAEKLKQSLPP 64
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: M2LC23_BAUPA (Uncharacterized protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2LC23_BAUPA) HSP 1 Score: 102 bits (254), Expect = 1.540e-26 Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 1 Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPPS 264 MP+E+ DIKTFIEICRRKDA SARIKK++ AT QTKFKVRC RYLYTLVLKD+DKAEKL+QSLPP+ Sbjct: 1 MPQEVSDIKTFIEICRRKDASSARIKKNR--ATHQTKFKVRCKRYLYTLVLKDSDKAEKLRQSLPPN 65
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Match: A0A2G5HEG9_CERBT (60S ribosomal protein L38 n=4 Tax=Cercospora TaxID=29002 RepID=A0A2G5HEG9_CERBT) HSP 1 Score: 102 bits (253), Expect = 2.320e-26 Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 1 Query: 64 MPREIHDIKTFIEICRRKDARSARIKKSKKGATTQTKFKVRCYRYLYTLVLKDADKAEKLKQSLPP 261 MPRE+ DIK+FIEICRRKDA SARIKK++ QTKFKVRC R+LYTLVLKD DKAEKLKQSLPP Sbjct: 1 MPREVTDIKSFIEICRRKDASSARIKKNRSAGINQTKFKVRCQRHLYTLVLKDNDKAEKLKQSLPP 66 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10221.350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10221.350.1 >prot_P-canaliculata_contig10221.350.1 ID=prot_P-canaliculata_contig10221.350.1|Name=mRNA_P-canaliculata_contig10221.350.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=99bp GHNTSTRTTYRRQTPHQSSPTMPREIHDIKTFIEICRRKDARSARIKKSKback to top mRNA from alignment at P-canaliculata_contig10221:4658..5025+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10221.350.1 ID=mRNA_P-canaliculata_contig10221.350.1|Name=mRNA_P-canaliculata_contig10221.350.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=368bp|location=Sequence derived from alignment at P-canaliculata_contig10221:4658..5025+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10221:4658..5025+ >mRNA_P-canaliculata_contig10221.350.1 ID=mRNA_P-canaliculata_contig10221.350.1|Name=mRNA_P-canaliculata_contig10221.350.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=594bp|location=Sequence derived from alignment at P-canaliculata_contig10221:4658..5025+ (Pelvetia canaliculata dioecious)back to top |