prot_P-canaliculata_contig10210.335.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10210.335.1
Unique Nameprot_P-canaliculata_contig10210.335.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length436
Homology
BLAST of mRNA_P-canaliculata_contig10210.335.1 vs. uniprot
Match: A0A6H5LKR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKR1_9PHAE)

HSP 1 Score: 408 bits (1049), Expect = 1.660e-125
Identity = 201/284 (70.77%), Postives = 237/284 (83.45%), Query Frame = 0
Query:    1 MDLSLQAISITTHVQLERRQGLGPRVLVELVDPNAALHLQAAGLKHVVSSAQLKLSILGQSCLCPGWSAVVANLLESRAAIPPQALQQGSWLAEYYVGAKKTFYSVEFSPAFEGVFFADAVVHIFERFELVLAAVETKQFAENGKDG---VLVNPSDDFCIGKGDRGFILAESWADARVIWDYLVDEGRGGVLDE-RGNLKARSRSPEEEEALALETVGTSDAVALGPQAFVDSMLFSRTLIHCQKRLPDGEVPDAGLILEWARQFQVRHCIAPQRIASHCIAS 280
            M LSLQAIS+ THV+L+RRQG GPR+LVELVDPNAALHLQAAG+KHVVSSAQ+KLS+L QSCLCPGW+AVVANLLESRAA+P + LQQGSWLAEYYVGAKKTFYSVEFSPAF GV F DAVVHIFE FEL+L AVETK+  + G DG   V+VNP  D+ IGKGDRGF+LAES ADARVIWDY+ ++G GG +DE  G LK R  SPEEEEALA+ET+GT+    +GP+ FVDSM+FSRTL+HCQK+LPDG  PD GL+LEWARQFQ  + ++ +++    +AS
Sbjct:  511 MGLSLQAISVMTHVELDRRQGCGPRLLVELVDPNAALHLQAAGIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGSWLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVETKRLGQAGLDGEYNVVVNPGGDYRIGKGDRGFLLAESQADARVIWDYMAEDGMGGAIDEGTGRLKERFSSPEEEEALAMETLGTAGVAGMGPETFVDSMVFSRTLLHCQKKLPDGRSPDIGLLLEWARQFQASNGMSDKKVVKKVLAS 794          
BLAST of mRNA_P-canaliculata_contig10210.335.1 vs. uniprot
Match: D7FKC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC7_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 1.070e-124
Identity = 200/284 (70.42%), Postives = 236/284 (83.10%), Query Frame = 0
Query:    1 MDLSLQAISITTHVQLERRQGLGPRVLVELVDPNAALHLQAAGLKHVVSSAQLKLSILGQSCLCPGWSAVVANLLESRAAIPPQALQQGSWLAEYYVGAKKTFYSVEFSPAFEGVFFADAVVHIFERFELVLAAVETKQFAENGKDG---VLVNPSDDFCIGKGDRGFILAESWADARVIWDYLVDEGRGGVLDE-RGNLKARSRSPEEEEALALETVGTSDAVALGPQAFVDSMLFSRTLIHCQKRLPDGEVPDAGLILEWARQFQVRHCIAPQRIASHCIAS 280
            M LSLQAIS+ THV+L+RRQG GPR+LVELVDPNAALHLQAAG+KHVVSSAQ+KLS+L QSCLCPGW+AVVANLLESRAA+P + LQQGSWLAEYYVGAKKTFYSVEFSPAF GV F DAVVHIFE FEL+L AVETK+  + G DG   V+VNP  D+ I KGDRGF+LAES ADARVIWDY+ ++G GG +DE  G LK R  SPEEEEALA+ET+GT+    +GP+ FVDSM+FSRTL+HCQK+LPDG  PD GL+LEWARQFQ  + ++ +++    +AS
Sbjct:  499 MGLSLQAISVMTHVELDRRQGCGPRLLVELVDPNAALHLQAAGIKHVVSSAQVKLSVLAQSCLCPGWAAVVANLLESRAALPAEVLQQGSWLAEYYVGAKKTFYSVEFSPAFTGVLFGDAVVHIFEYFELILVAVETKRHGQAGLDGEYNVVVNPGGDYRISKGDRGFLLAESQADARVIWDYMAEDGMGGAIDEGTGRLKERFSSPEEEEALAMETLGTAGVAGMGPETFVDSMVFSRTLLHCQKKLPDGHSPDTGLLLEWARQFQASNGMSDKKVVRKVLAS 782          
BLAST of mRNA_P-canaliculata_contig10210.335.1 vs. uniprot
Match: A0A7R9UDC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDC3_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.400e-38
Identity = 79/181 (43.65%), Postives = 110/181 (60.77%), Query Frame = 0
Query:    1 MDLSLQAISITTHVQLERRQGLGPRVLVELVDPNAALHLQAAGLKHVVSSAQLKLSILGQSCLCPGWSAVVANLLESRAAIPPQALQQGSWLAEYYVGAKKTFYSVEFSPAFEGVFFADAVVHIFERFELVLAAVETKQFAENGKDGVLVNPSDDFCIGKGDRGFILAESWADARVIWDYL 181
            M + L+A+S+    Q +RR G GPRV  EL+ P A  HL+ AGL+HVV +  LKLS+L  SCLCPG S ++ NL+ S + +PP  L   SW  EYY+G  K  Y VEFSP    V F +A   IF+ FE+VL  V      E  +  V++NP   + I + D  F+LA++  DA++IW+Y+
Sbjct:  492 MGVVLRALSVANFCQEQRRNGSGPRVFTELIQPQATRHLRTAGLRHVVCTDALKLSLLAHSCLCPGLSTLLVNLMRSHSVMPPAVLLDASWYVEYYMGTMKQLYVVEFSPHLHHVRFDEAAALIFQEFEIVLLGVFNTSGVEGLEGRVVLNPGHKYSIRRDDYAFVLADTARDAQLIWEYV 672          
BLAST of mRNA_P-canaliculata_contig10210.335.1 vs. uniprot
Match: A0A7S3UVY3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVY3_HETAK)

HSP 1 Score: 91.7 bits (226), Expect = 7.930e-18
Identity = 48/136 (35.29%), Postives = 70/136 (51.47%), Query Frame = 0
Query:   58 LGQSCLCPGWSAVVANLLESRAAIPPQALQQGS--------WLAEYYVGAKKTFYSVEFSPAFEGVFFADAVVHIFERFELVLAAVETKQFAENGKDGVLVNPSDDFCIGKGDRGFILAESWADARVIWDYLVDEG 185
            + Q  LCPGW A+V NL+ +  A PP               W  EY+ GA K   +V+FSP F G  F+     ++E FEL + AVE+    +     V++NP  D+ I   D+ F+LAE++A A  +W Y+   G
Sbjct:    1 MAQGLLCPGWPAIVLNLVRTHGAPPPGLFXXXXXXXXXXXLWYREYFQGASKQLLTVKFSPFFVGKTFSAVAAQVYETFELPVIAVESMASGQ-----VILNPDSDYIISPMDQAFVLAETYATAEQVWTYMEGPG 131          
BLAST of mRNA_P-canaliculata_contig10210.335.1 vs. uniprot
Match: A0A5B8MSS4_9CHLO (Calcium-activated potassium channel protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MSS4_9CHLO)

HSP 1 Score: 88.2 bits (217), Expect = 7.150e-15
Identity = 51/160 (31.87%), Postives = 85/160 (53.12%), Query Frame = 0
Query:   25 RVLVELVDPNAALH----LQAAGLKHVVSSAQLKLSILGQSCLCPGWSAVVANLLESRAAIPPQALQQGSWLAEYYVGAKKTFYSVEFSPAFEGVFFADAVVHIFERFELVLAAVETKQFAENGKDGVLVNPSDDFCIGKGDRGFILAESWADARVIWDY 180
            +V+++++ P   LH    +Q + +  +V   ++K+S+LGQ+CLCPG+S ++ NL++S  ++PP+      W  EY  G    FY    S +FEG  F + V  I+ +FE V  AVE       GK  + V P D   +G   + +++A     A +I  Y
Sbjct:  419 QVILQIIRPENKLHFIASMQQSEIDQIVCINEIKMSMLGQNCLCPGFSTLIGNLIQSSDSVPPEDASSEPWQFEYCHGCGYEFYRTPLSTSFEGRTFTEIVDIIYTKFECVTFAVEVLD--REGKRKIAVAPLD-LIVGSKAKAYVIAPDSEVAAMISTY 575          
BLAST of mRNA_P-canaliculata_contig10210.335.1 vs. uniprot
Match: A0A7S1CL09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CL09_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.940e-14
Identity = 60/171 (35.09%), Postives = 86/171 (50.29%), Query Frame = 0
Query:   26 VLVELVDPNAALHLQAAGLKHVVSSAQLKLSILGQSCLCPGWSAVVANLLESRAAIPPQALQQGS--WLAEYYVGAKKTFYSVEFSPAFEGVFFADAVVHIFERFELVLAAVETKQFA----------ENGKDG-------VLVNPSDDFCIGKGDRGFILAESWADARVI 177
            V  +LV+P   +H   A   H+V   +LK+ IL +SCLCPG+S ++ANL+ S +      L      W+ EY  G  +  YS+E S AF G  F  A    F  F L L AVET++ A          E+G++        +L+NP D + I  GDRGF +A+    A  +
Sbjct:  414 VYCQLVNPLNKMHSSWAEWDHLVCIEELKMGILAKSCLCPGFSTLIANLITSSSDYDVATLDHVDKMWVEEYLSGYGQEVYSLEMSSAFVGKLFCVAANVCFCEFGLCLFAVETRRDARPRKTATPRAEDGEEELGEVPTRILINPKD-YTIRSGDRGFFIADDHEKAATV 583          
BLAST of mRNA_P-canaliculata_contig10210.335.1 vs. uniprot
Match: A0A0V0Y862_TRIPS (Calcium-activated potassium channel slo-1 (Fragment) n=1 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V0Y862_TRIPS)

HSP 1 Score: 74.7 bits (182), Expect = 1.360e-10
Identity = 49/156 (31.41%), Postives = 81/156 (51.92%), Query Frame = 0
Query:   47 VVSSAQLKLSILGQSCLCPGWSAVVANLLESRAAIPPQALQQGSWLAEYYVGAKKTFYSVEFSPAFEGVFFADAVVHIFERFELVLAAVETKQFAENGKDGVLVNPSDDFCIGKGDRGFILAESWADARVIWDYLVDEGRGGVLDERGNLKARSRS 202
            VV  A+LKL I+ QSCL PG+S ++ANL   R+     ++    WL +Y  GA    Y+   S +F G+ F +    +F R +L+L A+E K   E+ +  +++NP  +  I    +GF +A+S  + +  + Y   +    VLD     K + R+
Sbjct:  238 VVCLAELKLGIIAQSCLAPGFSTMMANLFAMRSF--KTSMSTPGWLNDYLRGAGMEIYTESLSHSFVGMTFPETAELMFTRLKLLLLAIEIKD-DESLECNIIINPESNVIIKVNTQGFFIAQSADEVKRAF-YYCQKCHDDVLDVNLIKKCKCRN 389          
BLAST of mRNA_P-canaliculata_contig10210.335.1 vs. uniprot
Match: A0A0V1P5P8_9BILA (BK channel (Fragment) n=22 Tax=Trichinella TaxID=6333 RepID=A0A0V1P5P8_9BILA)

HSP 1 Score: 74.3 bits (181), Expect = 2.020e-10
Identity = 48/156 (30.77%), Postives = 81/156 (51.92%), Query Frame = 0
Query:   47 VVSSAQLKLSILGQSCLCPGWSAVVANLLESRAAIPPQALQQGSWLAEYYVGAKKTFYSVEFSPAFEGVFFADAVVHIFERFELVLAAVETKQFAENGKDGVLVNPSDDFCIGKGDRGFILAESWADARVIWDYLVDEGRGGVLDERGNLKARSRS 202
            V+  A+LKL I+ QSCL PG+S ++ANL   R+     ++    WL +Y  GA    Y+   S +F G+ F +    +F R +L+L A+E K   E+ +  +++NP  +  I    +GF +A+S  + +  + Y   +    VLD     K + R+
Sbjct:  550 VICLAELKLGIIAQSCLAPGFSTMMANLFAMRSF--KTSMSTPGWLNDYLRGAGMEIYTESLSHSFVGMTFPETAELMFTRLKLLLLAIEIKD-DESLECNIIINPESNVIIKVNTQGFFIAQSADEVKRAF-YYCQKCHDDVLDVNLIKKCKCRN 701          
BLAST of mRNA_P-canaliculata_contig10210.335.1 vs. uniprot
Match: A0A813UED6_9BILA (BK channel n=6 Tax=Brachionus TaxID=10194 RepID=A0A813UED6_9BILA)

HSP 1 Score: 73.9 bits (180), Expect = 2.980e-10
Identity = 46/142 (32.39%), Postives = 74/142 (52.11%), Query Frame = 0
Query:   48 VSSAQLKLSILGQSCLCPGWSAVVANLLESR---------AAIPPQALQQGSWLAEYYVGAKKTFYSVEFSPAFEGVFFADAVVHIFERFELVLAAVETKQFAENGKDGVLVNPSDDFCIGKGDRGFILAESWADARVIWDY 180
            V  A+LKL ++ QSCL PG+S+++ANL   R         A I  +   +  WLA Y  G+    Y+   SPAF G  F +A +  + + +L+L AVE+   +  G   + +NP +   +  G RGF +A S+ + +  + Y
Sbjct: 1167 VCIAELKLGLMAQSCLAPGFSSLMANLFAMRSYKEVFAAGANILYKKHTEDPWLAHYLRGSSMEMYTEYLSPAFTGKTFTEAAIICYTKLKLLLLAVESSNESGYGSH-LSINPGNTVRVESGTRGFFIAGSFEEIKRAYYY 1307          
BLAST of mRNA_P-canaliculata_contig10210.335.1 vs. uniprot
Match: L1JCR4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JCR4_GUITC)

HSP 1 Score: 73.2 bits (178), Expect = 4.710e-10
Identity = 54/199 (27.14%), Postives = 99/199 (49.75%), Query Frame = 0
Query:    5 LQAISITTHVQLERRQGLGPRVLVELVDPNAALHLQAAGLK----HVVSSAQLKLSILGQSCLCPGWSAVVANLLESRAAIPPQALQQGSWLAEYYVGAKKTFYSVEFSPAFEGVFFADAVVHIFERFELVLAAVETKQFAENGKDGVLVNPSDDFCIGKGDRG--FILAESWADARVIWDYLVDEGRGGVLDERGNLK 197
            ++AISI  +V   RR G   R++++L+ P    HL  +        ++   ++K+++LG+SCLCPG+S +++NL+ S      +  +   W+ EY  G+ K  Y    SP+F G+ F +    ++      L AVE       G   V++NP+  + I        F++AE   DA  +  + ++E    + +E G+ +
Sbjct:  393 IRAISIKKYVSA-RRPGEDIRIILQLLRPENRHHLNVSTCGGTDVQIICMDEIKMNLLGKSCLCPGFSTLISNLMISSGQSGDECER---WMTEYLSGSGKEIYCTTLSPSFGGMTFNEVCSQLYRVTGATLFAVEITDTL--GYSRVILNPAR-YRIPPNTSPVVFLIAEDVEDADSVRTFGLEEEEDNLSEELGSAQ 584          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10210.335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LKR1_9PHAE1.660e-12570.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKC7_ECTSI1.070e-12470.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9UDC3_9STRA1.400e-3843.65Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3UVY3_HETAK7.930e-1835.29Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5B8MSS4_9CHLO7.150e-1531.88Calcium-activated potassium channel protein n=1 Ta... [more]
A0A7S1CL09_9STRA2.940e-1435.09Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A0V0Y862_TRIPS1.360e-1031.41Calcium-activated potassium channel slo-1 (Fragmen... [more]
A0A0V1P5P8_9BILA2.020e-1030.77BK channel (Fragment) n=22 Tax=Trichinella TaxID=6... [more]
A0A813UED6_9BILA2.980e-1032.39BK channel n=6 Tax=Brachionus TaxID=10194 RepID=A0... [more]
L1JCR4_GUITC4.710e-1027.14Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003929Calcium-activated potassium channel BK, alpha subunitPFAMPF03493BK_channel_acoord: 44..135
e-value: 2.9E-21
score: 75.5
NoneNo IPR availablePANTHERPTHR10027:SF33POTASSIUM LARGE CONDUCTANCE CALCIUM-ACTIVATED CHANNEL, SUBFAMILY M, ALPHA MEMBER 1Acoord: 25..180
NoneNo IPR availablePANTHERPTHR10027CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAINcoord: 25..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 323..350
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..294
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 374..435
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 295..322
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 351..373
NoneNo IPR availableTMHMMTMhelixcoord: 353..375
NoneNo IPR availableTMHMMTMhelixcoord: 299..321

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10210contigP-canaliculata_contig10210:5463..10218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10210.335.1mRNA_P-canaliculata_contig10210.335.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10210 325..10257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10210.335.1 ID=prot_P-canaliculata_contig10210.335.1|Name=mRNA_P-canaliculata_contig10210.335.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=436bp
MDLSLQAISITTHVQLERRQGLGPRVLVELVDPNAALHLQAAGLKHVVSS
AQLKLSILGQSCLCPGWSAVVANLLESRAAIPPQALQQGSWLAEYYVGAK
KTFYSVEFSPAFEGVFFADAVVHIFERFELVLAAVETKQFAENGKDGVLV
NPSDDFCIGKGDRGFILAESWADARVIWDYLVDEGRGGVLDERGNLKARS
RSPEEEEALALETVGTSDAVALGPQAFVDSMLFSRTLIHCQKRLPDGEVP
DAGLILEWARQFQVRHCIAPQRIASHCIASHRATRRHVLRYFTMFVLRYF
AIFLSLVLCAYLCGVCACVYWSPVSLEDMPSSPPFTYSIHFLQDCFRRAS
IQSVISGVVLSYSGVIGSLSWLFHFPGVRSSQRRDGGDQDSGLRGPCATP
QPRPQHRCAPDRSQRVGRYHPCSCCCRVQRWLSRP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003929K_chnl_BK_asu