prot_P-canaliculata_contig102.304.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig102.304.1
Unique Nameprot_P-canaliculata_contig102.304.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length192
Homology
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A3M7HS47_HORWE (18S rRNA factor 2 n=18 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7HS47_HORWE)

HSP 1 Score: 249 bits (635), Expect = 2.050e-79
Identity = 132/197 (67.01%), Postives = 156/197 (79.19%), Query Frame = 0
Query:    1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARGAAEGDTD-----GQTRKRRKSEFKQQK 192
            KSV  ++KAA+K+GV+Y+SR+PPFMK QTLRH+L PHA KGLGRIFLTPE  E HV+RV+ GGNKKKSF DGWVEF SK +AK A   LNGNI+GGKKG +YHDDLW M+YLKGFKWS L EQ+ NE+AERAARLREEVRRTR EN+ F+ED ERGKM E M  KK+A+  A G+ D     GQ +K R  +FKQ+K
Sbjct:  121 KSVAASEKAARKTGVVYISRVPPFMKPQTLRHYLAPHALKGLGRIFLTPEDHEQHVQRVKRGGNKKKSFTDGWVEFASKTEAKLAAETLNGNIIGGKKGNFYHDDLWNMKYLKGFKWSHLTEQIANENAERAARLREEVRRTRQENKAFVEDVERGKMLEGMESKKKAKRKAAGEVDSAAGVGQEKKAR--DFKQRK 315          
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: N1QI53_SPHMS (18S rRNA factor 2 (Fragment) n=1 Tax=Sphaerulina musiva (strain SO2202) TaxID=692275 RepID=N1QI53_SPHMS)

HSP 1 Score: 233 bits (595), Expect = 2.590e-74
Identity = 115/165 (69.70%), Postives = 134/165 (81.21%), Query Frame = 0
Query:    1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQK 165
            K+   A K A+KSGV+Y+SR+PPFMK QTL+HFL PHA  GLGRIFLTPE    H +RV+NGGNKKKSF DGWVEFTSK +AK A   LNGNI+GGKKGG+YHDDLW M+YL+GFKW  L EQ+ NE+AERAAR+REEVRRTR ENR+F+ED ERGKM   M +K
Sbjct:  101 KAYEAAHKKAKKSGVVYISRVPPFMKPQTLKHFLEPHAPHGLGRIFLTPEDHTQHTQRVKNGGNKKKSFTDGWVEFTSKKEAKLAAEQLNGNIIGGKKGGFYHDDLWNMKYLRGFKWEHLTEQINNENAERAARIREEVRRTRKENRQFVEDVERGKMLAGMERK 265          
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A4U0UJG5_9PEZI (18S rRNA factor 2 n=1 Tax=Friedmanniomyces endolithicus TaxID=329885 RepID=A0A4U0UJG5_9PEZI)

HSP 1 Score: 234 bits (597), Expect = 8.180e-74
Identity = 116/171 (67.84%), Postives = 139/171 (81.29%), Query Frame = 0
Query:    1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARGA 171
            KSV+ A+K A+KSGV+Y+SRIPPFMK  TLRHFL PHA KGLGR+FLTPET  SH  RV+ GGNKKKSF DGWVEF SK +AKAA   LNG I+GGKKGG+Y DD+W ++YL+GFKW+ L EQ+ NE+AER ARLREEVRRTR EN+ F++D ERGKM E M +K+ A+ A
Sbjct:  112 KSVIAAEKVARKSGVLYISRIPPFMKPSTLRHFLLPHASKGLGRVFLTPETQTSHSARVKRGGNKKKSFTDGWVEFASKNEAKAAAETLNGEILGGKKGGFYRDDMWNVKYLRGFKWTHLTEQIANENAERVARLREEVRRTRKENKAFVDDVERGKMVEGMVRKRTAKEA 282          
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A4V5N786_9PEZI (18S rRNA factor 2 n=1 Tax=Friedmanniomyces endolithicus TaxID=329885 RepID=A0A4V5N786_9PEZI)

HSP 1 Score: 234 bits (596), Expect = 1.060e-73
Identity = 116/169 (68.64%), Postives = 139/169 (82.25%), Query Frame = 0
Query:    1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRAR 169
            KSVL A+K A+KSGV+Y+SRIPPFMK  TLRHFL PHA KGLGR+FLTPET  SH  RV+ GGNKKKSF DGWVEFTSK +AKAA   LNG I+GGKKGG+Y DD+W ++YL+GFKW+ L EQ+ NE+A+R ARLREEVRRTR EN+ F++D ER KM E M +K+RA+
Sbjct:  110 KSVLAAEKVARKSGVLYISRIPPFMKPSTLRHFLLPHASKGLGRVFLTPETQTSHSARVKRGGNKKKSFTDGWVEFTSKNEAKAAAERLNGEILGGKKGGFYRDDMWNVKYLRGFKWTHLTEQIANENAQRVARLREEVRRTRKENKAFVDDVERVKMVEGMVRKRRAK 278          
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A6A6FUF5_9PEZI (18S rRNA factor 2 (Fragment) n=1 Tax=Cercospora zeae-maydis SCOH1-5 TaxID=717836 RepID=A0A6A6FUF5_9PEZI)

HSP 1 Score: 229 bits (583), Expect = 1.130e-73
Identity = 116/166 (69.88%), Postives = 137/166 (82.53%), Query Frame = 0
Query:    6 AQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARK-GLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARG 170
            A +  QKSGVIYLSRIPPFMK QT+RH+L PHA K GLGRIFLTPE A SH +RV+NGGNKKK+F DGWVEF SK +A+ AV  LNGNI+GGKKGG+YHDD+W ++YLKGFKW  L EQ+R E+AER AR+REEVRR R ENR F+ED +RGKM E M +K+RA+G
Sbjct:   18 ATRKLQKSGVIYLSRIPPFMKPQTVRHYLVPHAPKAGLGRIFLTPEDATSHSKRVKNGGNKKKTFTDGWVEFLSKKEAQWAVEKLNGNIIGGKKGGFYHDDIWNLKYLKGFKWDHLTEQIRAENAERTARMREEVRRVRKENRAFVEDVQRGKMLEGMERKRRAKG 183          
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A4U0XM76_9PEZI (18S rRNA factor 2 n=1 Tax=Friedmanniomyces simplex TaxID=329884 RepID=A0A4U0XM76_9PEZI)

HSP 1 Score: 233 bits (594), Expect = 2.540e-73
Identity = 115/179 (64.25%), Postives = 140/179 (78.21%), Query Frame = 0
Query:    1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARGAAEGDTDGQ 179
            KSV+ A+K A+KSGV+Y+SRIPPFMK  TLRHFL PHA KGLGR+FLTPE   +H+ RV+ GGNKKKSF DGWVEF SK +AK A   LNG I GGKKGG+Y DD+W ++YL+GFKW+ L EQ+ NE+AER ARLREEVRRTR EN+ F+ED ERGKM E M +K+ A+    G+  G+
Sbjct:  113 KSVIAAEKTARKSGVLYISRIPPFMKPSTLRHFLLPHASKGLGRVFLTPEDHTAHLARVKRGGNKKKSFTDGWVEFASKSEAKQAAATLNGEIFGGKKGGFYRDDMWNVKYLRGFKWTHLTEQIANENAERVARLREEVRRTRKENKAFVEDVERGKMVEGMERKRAAKRKEGGEVGGE 291          
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A1V8TE53_9PEZI (18S rRNA factor 2 n=4 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8TE53_9PEZI)

HSP 1 Score: 233 bits (594), Expect = 2.620e-73
Identity = 116/173 (67.05%), Postives = 140/173 (80.92%), Query Frame = 0
Query:    1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARGAAE 173
            KSV  A+KAA++SGV+Y+SRIPPFMK  TL+HFL PHA  GLG+IFLTPE+  S++ R ++GGNKK SF DGWVEFTSK DAK A  +LNGN +GGKKGGYYHDDLW ++YL+GFKW  L EQ+  E+AER ARLR+EVR+TR ENR F+ED ERGKMEE M  K+RA+G  E
Sbjct:  115 KSVARAEKAARRSGVLYISRIPPFMKPHTLKHFLLPHAPSGLGKIFLTPESHASYLARKKSGGNKKHSFTDGWVEFTSKRDAKLAAEVLNGNCIGGKKGGYYHDDLWNVKYLRGFKWGHLTEQIAAENAEREARLRDEVRKTRKENRGFLEDVERGKMEEGMEMKRRAKGGVE 287          
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A4U0TJK1_9PEZI (18S rRNA factor 2 n=1 Tax=Salinomyces thailandica TaxID=706561 RepID=A0A4U0TJK1_9PEZI)

HSP 1 Score: 232 bits (591), Expect = 9.990e-73
Identity = 127/201 (63.18%), Postives = 148/201 (73.63%), Query Frame = 0
Query:    1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARGAAEGDTDGQTR---------KRRKSEFKQQK 192
            KSV  A+KAA+KSGV+Y+SR+PPFMK QTLRHFL PHA KGLGRIFLTPE   +H+ R R GGNKKKSF DGWVEFTSK DA+ AV  LNG ++GGKKGG+Y +DLW +RYL+GFKW  L EQ+ NEDAER ARLREE+RRTRV NR F+ D ERGKM E M      R A E   DG  +         K+R+ EFKQ+K
Sbjct:  123 KSVAAAEKAARKSGVVYISRVPPFMKPQTLRHFLAPHAPKGLGRIFLTPEDHTAHLARKRRGGNKKKSFTDGWVEFTSKSDAQFAVETLNGQLIGGKKGGFYCEDLWNLRYLRGFKWRHLTEQVANEDAERGARLREEIRRTRVGNRGFVADVERGKMLEGM-----ERRAVERGRDGHEKGDGGEAVGVKKREREFKQRK 318          
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A6A6CDR6_9PEZI (18S rRNA factor 2 n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6CDR6_9PEZI)

HSP 1 Score: 231 bits (589), Expect = 1.400e-72
Identity = 117/187 (62.57%), Postives = 147/187 (78.61%), Query Frame = 0
Query:    6 AQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARGAAEGDTDGQTRKRRKSEFKQQK 192
            A+KA +KSGV+Y+SR+PPFMK QTL+HFL PHARKGLGRIFLTPE   +H +RV++GGNKKKSF DGWVEF SK +AK A   LNGNI+GGKKG +Y DDLW M+YLKGFKW+ L EQ+ NE+AERAAR ++E+R+TR EN+ F+ED ER KM E M  KK+A+    G  D    +++K +FKQ+K
Sbjct:  121 AEKAVRKSGVVYISRVPPFMKPQTLKHFLEPHARKGLGRIFLTPEDHAAHAKRVKSGGNKKKSFTDGWVEFKSKNEAKIAAETLNGNIIGGKKGNFYRDDLWNMKYLKGFKWNHLTEQIANENAERAARTQQEIRKTRKENKAFVEDIERAKMLEGMESKKKAKMERGGAADAGNVEQQKRDFKQRK 307          
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: M2M4Z1_BAUPA (18S rRNA factor 2 (Fragment) n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2M4Z1_BAUPA)

HSP 1 Score: 229 bits (583), Expect = 2.480e-72
Identity = 111/169 (65.68%), Postives = 137/169 (81.07%), Query Frame = 0
Query:    1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRAR 169
            KS   A+KAA++SGV+Y+SR+PPFMK QTLRH+L PHA KGLGRIFLTPE   +H +RV+ GGNKKKSF DGWVEF SK +AK A   LNGNI+GGKKG +YHDDLW ++YLKG+KWS L EQ+ NE+AERAARLREE+R+TR EN+ F+ED ERGK    +  K++A+
Sbjct:  112 KSAAAAEKAARQSGVVYISRVPPFMKPQTLRHYLAPHATKGLGRIFLTPEDHVAHTQRVKRGGNKKKSFTDGWVEFVSKREAKVAAETLNGNIIGGKKGNFYHDDLWNIKYLKGYKWSHLTEQIANENAERAARLREEIRKTRKENKAFLEDVERGKTIAGIENKRKAK 280          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M7HS47_HORWE2.050e-7967.0118S rRNA factor 2 n=18 Tax=Hortaea werneckii TaxID... [more]
N1QI53_SPHMS2.590e-7469.7018S rRNA factor 2 (Fragment) n=1 Tax=Sphaerulina m... [more]
A0A4U0UJG5_9PEZI8.180e-7467.8418S rRNA factor 2 n=1 Tax=Friedmanniomyces endolit... [more]
A0A4V5N786_9PEZI1.060e-7368.6418S rRNA factor 2 n=1 Tax=Friedmanniomyces endolit... [more]
A0A6A6FUF5_9PEZI1.130e-7369.8818S rRNA factor 2 (Fragment) n=1 Tax=Cercospora ze... [more]
A0A4U0XM76_9PEZI2.540e-7364.2518S rRNA factor 2 n=1 Tax=Friedmanniomyces simplex... [more]
A0A1V8TE53_9PEZI2.620e-7367.0518S rRNA factor 2 n=4 Tax=Rachicladosporium TaxID=... [more]
A0A4U0TJK1_9PEZI9.990e-7363.1818S rRNA factor 2 n=1 Tax=Salinomyces thailandica ... [more]
A0A6A6CDR6_9PEZI1.400e-7262.5718S rRNA factor 2 n=1 Tax=Zasmidium cellare ATCC 3... [more]
M2M4Z1_BAUPA2.480e-7265.6818S rRNA factor 2 (Fragment) n=1 Tax=Baudoinia pan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..152
NoneNo IPR availablePANTHERPTHR12311:SF7ACTIVATOR OF BASAL TRANSCRIPTION 1coord: 7..192
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 3..98
e-value: 2.2E-8
score: 35.9
IPR039119ABT1/Esf2PANTHERPTHR12311FAMILY NOT NAMEDcoord: 7..192
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 11..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig102contigP-canaliculata_contig102:36680..37255 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig102.304.1mRNA_P-canaliculata_contig102.304.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig102 36680..37255 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig102.304.1 ID=prot_P-canaliculata_contig102.304.1|Name=mRNA_P-canaliculata_contig102.304.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=192bp
KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPE
TAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGG
YYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFM
EDWERGKMEENMRQKKRARGAAEGDTDGQTRKRRKSEFKQQK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR039119ABT1/Esf2
IPR035979RBD_domain_sf