mRNA_P-canaliculata_contig102.304.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A3M7HS47_HORWE (18S rRNA factor 2 n=18 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7HS47_HORWE) HSP 1 Score: 249 bits (635), Expect = 2.050e-79 Identity = 132/197 (67.01%), Postives = 156/197 (79.19%), Query Frame = 1 Query: 1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARGAAEGDTD-----GQTRKRRKSEFKQQK 576 KSV ++KAA+K+GV+Y+SR+PPFMK QTLRH+L PHA KGLGRIFLTPE E HV+RV+ GGNKKKSF DGWVEF SK +AK A LNGNI+GGKKG +YHDDLW M+YLKGFKWS L EQ+ NE+AERAARLREEVRRTR EN+ F+ED ERGKM E M KK+A+ A G+ D GQ +K R +FKQ+K Sbjct: 121 KSVAASEKAARKTGVVYISRVPPFMKPQTLRHYLAPHALKGLGRIFLTPEDHEQHVQRVKRGGNKKKSFTDGWVEFASKTEAKLAAETLNGNIIGGKKGNFYHDDLWNMKYLKGFKWSHLTEQIANENAERAARLREEVRRTRQENKAFVEDVERGKMLEGMESKKKAKRKAAGEVDSAAGVGQEKKAR--DFKQRK 315
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: N1QI53_SPHMS (18S rRNA factor 2 (Fragment) n=1 Tax=Sphaerulina musiva (strain SO2202) TaxID=692275 RepID=N1QI53_SPHMS) HSP 1 Score: 233 bits (595), Expect = 2.590e-74 Identity = 115/165 (69.70%), Postives = 134/165 (81.21%), Query Frame = 1 Query: 1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQK 495 K+ A K A+KSGV+Y+SR+PPFMK QTL+HFL PHA GLGRIFLTPE H +RV+NGGNKKKSF DGWVEFTSK +AK A LNGNI+GGKKGG+YHDDLW M+YL+GFKW L EQ+ NE+AERAAR+REEVRRTR ENR+F+ED ERGKM M +K Sbjct: 101 KAYEAAHKKAKKSGVVYISRVPPFMKPQTLKHFLEPHAPHGLGRIFLTPEDHTQHTQRVKNGGNKKKSFTDGWVEFTSKKEAKLAAEQLNGNIIGGKKGGFYHDDLWNMKYLRGFKWEHLTEQINNENAERAARIREEVRRTRKENRQFVEDVERGKMLAGMERK 265
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A4U0UJG5_9PEZI (18S rRNA factor 2 n=1 Tax=Friedmanniomyces endolithicus TaxID=329885 RepID=A0A4U0UJG5_9PEZI) HSP 1 Score: 234 bits (597), Expect = 8.180e-74 Identity = 116/171 (67.84%), Postives = 139/171 (81.29%), Query Frame = 1 Query: 1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARGA 513 KSV+ A+K A+KSGV+Y+SRIPPFMK TLRHFL PHA KGLGR+FLTPET SH RV+ GGNKKKSF DGWVEF SK +AKAA LNG I+GGKKGG+Y DD+W ++YL+GFKW+ L EQ+ NE+AER ARLREEVRRTR EN+ F++D ERGKM E M +K+ A+ A Sbjct: 112 KSVIAAEKVARKSGVLYISRIPPFMKPSTLRHFLLPHASKGLGRVFLTPETQTSHSARVKRGGNKKKSFTDGWVEFASKNEAKAAAETLNGEILGGKKGGFYRDDMWNVKYLRGFKWTHLTEQIANENAERVARLREEVRRTRKENKAFVDDVERGKMVEGMVRKRTAKEA 282
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A4V5N786_9PEZI (18S rRNA factor 2 n=1 Tax=Friedmanniomyces endolithicus TaxID=329885 RepID=A0A4V5N786_9PEZI) HSP 1 Score: 234 bits (596), Expect = 1.060e-73 Identity = 116/169 (68.64%), Postives = 139/169 (82.25%), Query Frame = 1 Query: 1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRAR 507 KSVL A+K A+KSGV+Y+SRIPPFMK TLRHFL PHA KGLGR+FLTPET SH RV+ GGNKKKSF DGWVEFTSK +AKAA LNG I+GGKKGG+Y DD+W ++YL+GFKW+ L EQ+ NE+A+R ARLREEVRRTR EN+ F++D ER KM E M +K+RA+ Sbjct: 110 KSVLAAEKVARKSGVLYISRIPPFMKPSTLRHFLLPHASKGLGRVFLTPETQTSHSARVKRGGNKKKSFTDGWVEFTSKNEAKAAAERLNGEILGGKKGGFYRDDMWNVKYLRGFKWTHLTEQIANENAQRVARLREEVRRTRKENKAFVDDVERVKMVEGMVRKRRAK 278
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A6A6FUF5_9PEZI (18S rRNA factor 2 (Fragment) n=1 Tax=Cercospora zeae-maydis SCOH1-5 TaxID=717836 RepID=A0A6A6FUF5_9PEZI) HSP 1 Score: 229 bits (583), Expect = 1.130e-73 Identity = 116/166 (69.88%), Postives = 137/166 (82.53%), Query Frame = 1 Query: 16 AQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARK-GLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARG 510 A + QKSGVIYLSRIPPFMK QT+RH+L PHA K GLGRIFLTPE A SH +RV+NGGNKKK+F DGWVEF SK +A+ AV LNGNI+GGKKGG+YHDD+W ++YLKGFKW L EQ+R E+AER AR+REEVRR R ENR F+ED +RGKM E M +K+RA+G Sbjct: 18 ATRKLQKSGVIYLSRIPPFMKPQTVRHYLVPHAPKAGLGRIFLTPEDATSHSKRVKNGGNKKKTFTDGWVEFLSKKEAQWAVEKLNGNIIGGKKGGFYHDDIWNLKYLKGFKWDHLTEQIRAENAERTARMREEVRRVRKENRAFVEDVQRGKMLEGMERKRRAKG 183
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A4U0XM76_9PEZI (18S rRNA factor 2 n=1 Tax=Friedmanniomyces simplex TaxID=329884 RepID=A0A4U0XM76_9PEZI) HSP 1 Score: 233 bits (594), Expect = 2.540e-73 Identity = 115/179 (64.25%), Postives = 140/179 (78.21%), Query Frame = 1 Query: 1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARGAAEGDTDGQ 537 KSV+ A+K A+KSGV+Y+SRIPPFMK TLRHFL PHA KGLGR+FLTPE +H+ RV+ GGNKKKSF DGWVEF SK +AK A LNG I GGKKGG+Y DD+W ++YL+GFKW+ L EQ+ NE+AER ARLREEVRRTR EN+ F+ED ERGKM E M +K+ A+ G+ G+ Sbjct: 113 KSVIAAEKTARKSGVLYISRIPPFMKPSTLRHFLLPHASKGLGRVFLTPEDHTAHLARVKRGGNKKKSFTDGWVEFASKSEAKQAAATLNGEIFGGKKGGFYRDDMWNVKYLRGFKWTHLTEQIANENAERVARLREEVRRTRKENKAFVEDVERGKMVEGMERKRAAKRKEGGEVGGE 291
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A1V8TE53_9PEZI (18S rRNA factor 2 n=4 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8TE53_9PEZI) HSP 1 Score: 233 bits (594), Expect = 2.620e-73 Identity = 116/173 (67.05%), Postives = 140/173 (80.92%), Query Frame = 1 Query: 1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARGAAE 519 KSV A+KAA++SGV+Y+SRIPPFMK TL+HFL PHA GLG+IFLTPE+ S++ R ++GGNKK SF DGWVEFTSK DAK A +LNGN +GGKKGGYYHDDLW ++YL+GFKW L EQ+ E+AER ARLR+EVR+TR ENR F+ED ERGKMEE M K+RA+G E Sbjct: 115 KSVARAEKAARRSGVLYISRIPPFMKPHTLKHFLLPHAPSGLGKIFLTPESHASYLARKKSGGNKKHSFTDGWVEFTSKRDAKLAAEVLNGNCIGGKKGGYYHDDLWNVKYLRGFKWGHLTEQIAAENAEREARLRDEVRKTRKENRGFLEDVERGKMEEGMEMKRRAKGGVE 287
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A4U0TJK1_9PEZI (18S rRNA factor 2 n=1 Tax=Salinomyces thailandica TaxID=706561 RepID=A0A4U0TJK1_9PEZI) HSP 1 Score: 232 bits (591), Expect = 9.990e-73 Identity = 127/201 (63.18%), Postives = 148/201 (73.63%), Query Frame = 1 Query: 1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARGAAEGDTDGQTR---------KRRKSEFKQQK 576 KSV A+KAA+KSGV+Y+SR+PPFMK QTLRHFL PHA KGLGRIFLTPE +H+ R R GGNKKKSF DGWVEFTSK DA+ AV LNG ++GGKKGG+Y +DLW +RYL+GFKW L EQ+ NEDAER ARLREE+RRTRV NR F+ D ERGKM E M R A E DG + K+R+ EFKQ+K Sbjct: 123 KSVAAAEKAARKSGVVYISRVPPFMKPQTLRHFLAPHAPKGLGRIFLTPEDHTAHLARKRRGGNKKKSFTDGWVEFTSKSDAQFAVETLNGQLIGGKKGGFYCEDLWNLRYLRGFKWRHLTEQVANEDAERGARLREEIRRTRVGNRGFVADVERGKMLEGM-----ERRAVERGRDGHEKGDGGEAVGVKKREREFKQRK 318
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: A0A6A6CDR6_9PEZI (18S rRNA factor 2 n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6CDR6_9PEZI) HSP 1 Score: 231 bits (589), Expect = 1.400e-72 Identity = 117/187 (62.57%), Postives = 147/187 (78.61%), Query Frame = 1 Query: 16 AQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRARGAAEGDTDGQTRKRRKSEFKQQK 576 A+KA +KSGV+Y+SR+PPFMK QTL+HFL PHARKGLGRIFLTPE +H +RV++GGNKKKSF DGWVEF SK +AK A LNGNI+GGKKG +Y DDLW M+YLKGFKW+ L EQ+ NE+AERAAR ++E+R+TR EN+ F+ED ER KM E M KK+A+ G D +++K +FKQ+K Sbjct: 121 AEKAVRKSGVVYISRVPPFMKPQTLKHFLEPHARKGLGRIFLTPEDHAAHAKRVKSGGNKKKSFTDGWVEFKSKNEAKIAAETLNGNIIGGKKGNFYRDDLWNMKYLKGFKWNHLTEQIANENAERAARTQQEIRKTRKENKAFVEDIERAKMLEGMESKKKAKMERGGAADAGNVEQQKRDFKQRK 307
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Match: M2M4Z1_BAUPA (18S rRNA factor 2 (Fragment) n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2M4Z1_BAUPA) HSP 1 Score: 229 bits (583), Expect = 2.480e-72 Identity = 111/169 (65.68%), Postives = 137/169 (81.07%), Query Frame = 1 Query: 1 KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPETAESHVRRVRNGGNKKKSFADGWVEFTSKGDAKAAVGMLNGNIMGGKKGGYYHDDLWTMRYLKGFKWSDLQEQMRNEDAERAARLREEVRRTRVENRRFMEDWERGKMEENMRQKKRAR 507 KS A+KAA++SGV+Y+SR+PPFMK QTLRH+L PHA KGLGRIFLTPE +H +RV+ GGNKKKSF DGWVEF SK +AK A LNGNI+GGKKG +YHDDLW ++YLKG+KWS L EQ+ NE+AERAARLREE+R+TR EN+ F+ED ERGK + K++A+ Sbjct: 112 KSAAAAEKAARQSGVVYISRVPPFMKPQTLRHYLAPHATKGLGRIFLTPEDHVAHTQRVKRGGNKKKSFTDGWVEFVSKREAKVAAETLNGNIIGGKKGNFYHDDLWNIKYLKGYKWSHLTEQIANENAERAARLREEIRKTRKENKAFLEDVERGKTIAGIENKRKAK 280 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102.304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig102.304.1 >prot_P-canaliculata_contig102.304.1 ID=prot_P-canaliculata_contig102.304.1|Name=mRNA_P-canaliculata_contig102.304.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=192bp KSVLGAQKAAQKSGVIYLSRIPPFMKAQTLRHFLTPHARKGLGRIFLTPEback to top mRNA from alignment at P-canaliculata_contig102:36680..37255+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig102.304.1 ID=mRNA_P-canaliculata_contig102.304.1|Name=mRNA_P-canaliculata_contig102.304.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=576bp|location=Sequence derived from alignment at P-canaliculata_contig102:36680..37255+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig102:36680..37255+ >mRNA_P-canaliculata_contig102.304.1 ID=mRNA_P-canaliculata_contig102.304.1|Name=mRNA_P-canaliculata_contig102.304.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1152bp|location=Sequence derived from alignment at P-canaliculata_contig102:36680..37255+ (Pelvetia canaliculata dioecious)back to top |