prot_P-canaliculata_contig10188.273.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10188.273.1
Unique Nameprot_P-canaliculata_contig10188.273.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length152
Homology
BLAST of mRNA_P-canaliculata_contig10188.273.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 3.170e-60
Identity = 92/151 (60.93%), Postives = 109/151 (72.19%), Query Frame = 0
Query:    1 LTVALNAAQYDGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDTPSFIFEGSHEYYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEVPGAPYPLYGAQKVKTTTMMGKTATQEVSL 151
            + VALNA QY  S +CGAC+EG  SG+G+G+NPI  +FKA++ DKCPEC  GDLDFS SGDGRWDI WKFV CPG +T SF+   ++ YYWK+QPRGT TPVV LTVDG S  +T DN FEV        GAQ V TTT+ G T T EVS+
Sbjct:  137 IPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEET-SFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVSV 286          
BLAST of mRNA_P-canaliculata_contig10188.273.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 9.020e-56
Identity = 81/151 (53.64%), Postives = 106/151 (70.20%), Query Frame = 0
Query:    1 LTVALNAAQYDGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDTPSFIFEGSHEYYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEVPGAPYPLYGAQKVKTTTMMGKTATQEVSL 151
            + VALN  QY  S +CGACIEGEG G G G +P+ G+FKAYV D+CPEC  GDLDF+  GDGRWDISW FV C G    +F+FEGS+E+YWKIQPRG ++PV  L ++G    +++DNFF + G P+   G Q+V T T++ K   Q V++
Sbjct:   72 IPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEGGPFD--GEQEVHTKTVLNKRRRQSVAM 220          
BLAST of mRNA_P-canaliculata_contig10188.273.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 3.770e-51
Identity = 85/151 (56.29%), Postives = 104/151 (68.87%), Query Frame = 0
Query:    3 VALNAAQYDGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDTPSFIFEGSHEYYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEV--PGAPYPLYGAQKVKTTTMMGKTATQEVSL 151
            VALN  QY  S +CGAC+EGEG+G G+GS+P+ G+FK ++MDKCPEC+ GDLDF    DGRWDI WKFVECP  +  SF  E   EYYWKIQPRGT TPV  LT+ G + ++TDDN FE+  P    P Y  Q V TTT+ G     E+S+
Sbjct:  346 VALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGD-PWYEPQMVVTTTVGGVVEETEMSV 494          
BLAST of mRNA_P-canaliculata_contig10188.273.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.190e-47
Identity = 82/150 (54.67%), Postives = 102/150 (68.00%), Query Frame = 0
Query:    3 VALNAAQYDGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDTPSFIFEGSHEYYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEVPG-APYPLYGAQKVKTTTMMGKTATQEVSL 151
            VALNAAQY  S +CG+C+EGEG+G G G NPI G+FK ++MDKCPEC  GDLDF    DGRWDI W+FV CPG +    + E +  YYWKIQPRGT TPV  LT+ G + ++TDDN FE+   +  P Y  Q V TTT+ G     E+S+
Sbjct:  383 VALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEEVSFKVVEMT-PYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTVGGVVEETEMSV 530          
BLAST of mRNA_P-canaliculata_contig10188.273.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR)

HSP 1 Score: 161 bits (407), Expect = 2.370e-46
Identity = 72/122 (59.02%), Postives = 90/122 (73.77%), Query Frame = 0
Query:    1 LTVALNAAQYDGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDTPSFIFEGSHEYYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEV 122
            L VA+N AQY+ S  CGAC++  G G G+G+NPI G+FKAYV D+CPEC  GD+D SK GDGRW + WKF+ CPG +   F+FEGS+ YY K+QPRG KTPV  L+V G  G+KT DNF+ V
Sbjct:   58 LPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPG-EFVFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIV 178          
BLAST of mRNA_P-canaliculata_contig10188.273.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR)

HSP 1 Score: 159 bits (403), Expect = 8.980e-46
Identity = 71/130 (54.62%), Postives = 94/130 (72.31%), Query Frame = 0
Query:    3 VALNAAQYDGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDTPSFIFEGSHEYYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEVP---GAPYPL 129
            VA+N AQY+ S+ CGAC+   G G G+G+NP+ G+FKAYV D+CPEC  GD+D SKSGDGRW + W+F+ CPG +   F+FEGS+ +Y K+QPRG KTPV   +V+G  G+KT DNF+ +    G  YPL
Sbjct:   55 VAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPG-EWVFFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGFRYPL 183          
BLAST of mRNA_P-canaliculata_contig10188.273.1 vs. uniprot
Match: A0A1X6NJE1_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM)

HSP 1 Score: 153 bits (386), Expect = 4.850e-44
Identity = 72/138 (52.17%), Postives = 90/138 (65.22%), Query Frame = 0
Query:    3 VALNAAQYDGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECP-GSDTPSFIFEGSHEYYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEVPGAPYPLYGAQKVKTTT 139
            VA++ A Y GS  CGAC+   GSG+GAG+NPITG+F AYVMD+CPECA GDLD +  GDGRW +SW  V CP     P F+ EGS+ +Y K+Q RG   P   ++V GA+ ++T DNFF V  A  PL     V  TT
Sbjct:   78 VAVSTADYAGSAACGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGAPEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFFIVATAGPPLEPPLTVTGTT 215          
BLAST of mRNA_P-canaliculata_contig10188.273.1 vs. uniprot
Match: A0A2P6NBD6_9EUKA (Endochitinase-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBD6_9EUKA)

HSP 1 Score: 140 bits (354), Expect = 7.520e-36
Identity = 67/158 (42.41%), Postives = 101/158 (63.92%), Query Frame = 0
Query:    1 LTVALNAAQYDGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECP-GSDTPSFIFEGSHEYYWKIQPRGTKTPVVELTVDGASGS------KTDDNFFEVP-GAPYPLYGAQKVKTTTMMGKTATQEVS 150
            ++VA+ +A + GS  CG+CI+  GSG GAGSNP+ G+F A+V D+CP C  G LDF+K+GDG WDISWK V+CP G+    + F+GS+E+Y K+Q R  +TP+  +++   +        +T DNFFE+P G P P+     ++ T+  G+     +S
Sbjct:  368 VSVAMVSAYWFGSAACGSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIYYAFQGSNEWYMKVQARNHRTPLNFISIQDPNTKQYRKMKRTGDNFFELPDGFPVPVKYPAPIQLTSFSGEVLNDAIS 525          
BLAST of mRNA_P-canaliculata_contig10188.273.1 vs. uniprot
Match: A0A2P6NBF0_9EUKA (MAP/microtubule affinity-regulating kinase 3-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBF0_9EUKA)

HSP 1 Score: 140 bits (354), Expect = 7.700e-36
Identity = 67/158 (42.41%), Postives = 101/158 (63.92%), Query Frame = 0
Query:    1 LTVALNAAQYDGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECP-GSDTPSFIFEGSHEYYWKIQPRGTKTPVVELTVDGASGS------KTDDNFFEVP-GAPYPLYGAQKVKTTTMMGKTATQEVS 150
            ++VA+ +A + GS  CG+CI+  GSG GAGSNP+ G+F A+V D+CP C  G LDF+K+GDG WDISWK V+CP G+    + F+GS+E+Y K+Q R  +TP+  +++   +        +T DNFFE+P G P P+     ++ T+  G+     +S
Sbjct:  761 VSVAMVSAYWFGSAACGSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIYYAFQGSNEWYMKVQARNHRTPLNFISIQDPNTKQYRKMKRTGDNFFELPDGFPVPVKYPAPIQLTSFSGEVLNDAIS 918          
BLAST of mRNA_P-canaliculata_contig10188.273.1 vs. uniprot
Match: A0A2V0PJ07_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PJ07_9CHLO)

HSP 1 Score: 125 bits (313), Expect = 9.110e-33
Identity = 58/151 (38.41%), Postives = 95/151 (62.91%), Query Frame = 0
Query:    3 VALNAAQYDGSELCGACIEGEGSGNGAGSNPITGSFK-AYVMDKCPECATGDLDFSKSGDGRWDISWKFVECP-GSDTPSFIFEGSHEYYWKIQPRGTKTPVVELTV--DGA--SGSKTDDNFFEVPGAPYPLYGA---QKVKTTTMMGKT 144
            +A+NAAQY G+ +CG C+   G+G GAG NPI+  ++  ++ D+CPECA G +D  K+GDGRW + W+ V+CP GS   ++ ++G ++YY K+Q    + P+ +L +  +GA      T DN+FEV G     +G+     ++ T+++G T
Sbjct:   62 LAINAAQYTGTSICGLCVRFRGTGGGAGGNPISSDWQPGFICDECPECAFGSIDLQKNGDGRWKVEWEPVQCPVGSSNFAYGYQGGNDYYKKVQVANARAPISKLEIKRNGAWQQAVATIDNYFEVHGYVADFWGSGGCASIRVTSILGDT 212          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10188.273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRN1_ECTSI3.170e-6060.93Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D8LHU1_ECTSI9.020e-5653.64Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879... [more]
D8LGP4_ECTSI3.770e-5156.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBW3_9PHAE1.190e-4754.67Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A2V3ISL2_9FLOR2.370e-4659.02Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=... [more]
F2Z7J0_9FLOR8.980e-4654.62Uncharacterized protein n=1 Tax=Gracilariopsis and... [more]
A0A1X6NJE1_PORUM4.850e-4452.17Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A2P6NBD6_9EUKA7.520e-3642.41Endochitinase-like n=1 Tax=Planoprotostelium fungi... [more]
A0A2P6NBF0_9EUKA7.700e-3642.41MAP/microtubule affinity-regulating kinase 3-like ... [more]
A0A2V0PJ07_9CHLO9.110e-3338.41Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 1..73
e-value: 3.3E-13
score: 51.7
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 2..94
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3D2.60.40.760coord: 78..151
e-value: 3.6E-7
score: 32.2
NoneNo IPR availablePANTHERPTHR31836FAMILY NOT NAMEDcoord: 3..149
NoneNo IPR availablePANTHERPTHR31836:SF21EXPANSIN-LIKE PROTEIN 2coord: 3..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10188contigP-canaliculata_contig10188:10900..11707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10188.273.1mRNA_P-canaliculata_contig10188.273.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10188 10900..11707 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10188.273.1 ID=prot_P-canaliculata_contig10188.273.1|Name=mRNA_P-canaliculata_contig10188.273.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=152bp
LTVALNAAQYDGSELCGACIEGEGSGNGAGSNPITGSFKAYVMDKCPECA
TGDLDFSKSGDGRWDISWKFVECPGSDTPSFIFEGSHEYYWKIQPRGTKT
PVVELTVDGASGSKTDDNFFEVPGAPYPLYGAQKVKTTTMMGKTATQEVS
L*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036908RlpA-like_sf
IPR036749Expansin_CBD_sf