Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 473 |
| Cds size | 402 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817358.6024208-UTR-P-canaliculata_contig99912:86..156 | 1622817358.6024208-UTR-P-canaliculata_contig99912:86..156 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig99912 87..156 + |
| 1693495245.8046777-UTR-P-canaliculata_contig99912:86..156 | 1693495245.8046777-UTR-P-canaliculata_contig99912:86..156 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig99912 87..156 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817358.615128-CDS-P-canaliculata_contig99912:156..558 | 1622817358.615128-CDS-P-canaliculata_contig99912:156..558 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99912 157..558 + |
| 1693495245.8128388-CDS-P-canaliculata_contig99912:156..558 | 1693495245.8128388-CDS-P-canaliculata_contig99912:156..558 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig99912 157..558 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99912.24104.1 >prot_P-canaliculata_contig99912.24104.1 ID=prot_P-canaliculata_contig99912.24104.1|Name=mRNA_P-canaliculata_contig99912.24104.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=134bp
MAARRSPQGSGPRAGASNPQTPAPAYSDRLSQLEKDVAEIRDCTIKEVLE
KLHRLGYEIQEVNSRFETDRRTGDSLEDLRVKVDDFGDEMRNLRRQVERG
SAPLPPPNQQAGTFPIPTYSGERSSLSRFLKQFY back to topmRNA from alignment at P-canaliculata_contig99912:87..558+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig99912.24104.1 ID=mRNA_P-canaliculata_contig99912.24104.1|Name=mRNA_P-canaliculata_contig99912.24104.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=472bp|location=Sequence derived from alignment at P-canaliculata_contig99912:87..558+ (Pelvetia canaliculata dioecious)
CGTGGTGAGCTTGCAGTAAGCTAGGGTTGTGGAATAGTCAAGTCCCTATC
TCAAGAAAATTCGAATTCAAATGGCTGCAAGGCGATCGCCGCAAGGTTCG
GGCCCTAGGGCAGGAGCCTCGAACCCCCAAACACCAGCCCCAGCATATAG
CGATAGGTTGTCGCAGCTGGAAAAGGATGTGGCCGAGATCAGGGACTGCA
CGATAAAGGAAGTGCTGGAGAAGCTTCATCGCCTGGGCTATGAGATTCAA
GAAGTGAACTCCAGGTTTGAAACTGATCGTCGTACAGGCGACTCGCTTGA
AGACTTAAGGGTAAAAGTAGACGATTTTGGAGATGAGATGAGAAATTTGA
GAAGACAAGTCGAGCGAGGCTCGGCACCATTGCCCCCACCGAACCAGCAG
GCGGGAACTTTCCCGATCCCCACGTACTCTGGGGAACGCAGCAGCCTATC
TAGGTTCTTGAAACAGTTTTAC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig99912:87..558+ >mRNA_P-canaliculata_contig99912.24104.1 ID=mRNA_P-canaliculata_contig99912.24104.1|Name=mRNA_P-canaliculata_contig99912.24104.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=804bp|location=Sequence derived from alignment at P-canaliculata_contig99912:87..558+ (Pelvetia canaliculata dioecious)
ATGGCTGCAAGGCGATCGCCGCAAGGTTCGGGCCCTAGGGCAGGAGCCTC
GAACCCCCAAACACCAGCCCCAGCATATAGCGATAGGTTGTCGCAGCTGG
AAAAGGATGTGGCCGAGATCAGGGACTGCACGATAAAGGAAGTGCTGGAG
AAGCTTCATCGCCTGGGCTATGAGATTCAAGAAGTGAACTCCAGGTTTGA
AACTGATCGTCGTACAGGCGACTCGCTTGAAGACTTAAGGGTAAAAGTAG
ACGATTTTGGAGATGAGATGAGAAATTTGAGAAGACAAGTCGAGCGAGGC
TCGGCACCATTGCCCCCACCGAACCAGCAGGCGGGAACTTTCCCGATCCC
CACGTACTCTGGGGAACGCAGCAGCCTATCTAGGTTCTTGAAACAGTTTT
ACATGGCTGCAAGGCGATCGCCGCAAGGTTCGGGCCCTAGGGCAGGAGCC
TCGAACCCCCAAACACCAGCCCCAGCATATAGCGATAGGTTGTCGCAGCT
GGAAAAGGATGTGGCCGAGATCAGGGACTGCACGATAAAGGAAGTGCTGG
AGAAGCTTCATCGCCTGGGCTATGAGATTCAAGAAGTGAACTCCAGGTTT
GAAACTGATCGTCGTACAGGCGACTCGCTTGAAGACTTAAGGGTAAAAGT
AGACGATTTTGGAGATGAGATGAGAAATTTGAGAAGACAAGTCGAGCGAG
GCTCGGCACCATTGCCCCCACCGAACCAGCAGGCGGGAACTTTCCCGATC
CCCACGTACTCTGGGGAACGCAGCAGCCTATCTAGGTTCTTGAAACAGTT
TTAC back to top
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