mRNA_P-canaliculata_contig9979.24096.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: D7FWI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI0_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 3.650e-110
Identity = 220/422 (52.13%), Postives = 254/422 (60.19%), Query Frame = 1

Query:    4 RKEMTDTIKADLERLYPTGCGEHFLAPARQQLLLSVLSLWADLHTDTGYRQGMHELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGY----RHAPPSMYLGGLSDTAEDDHLRAGSSESGPAWLMDGGKTGGESGNGFSRRIPRSNSNHSREQQQRLRAEEEYGRGLGGA-------------GFGREGGIEARGGDMRNNWQQGLDEFTRRALSAAQDVAKRAVQTVERTQHGG--------GSAPGA----LARRLREVCAAMEAGKTSVHAAAEDIREVARLLEGRKEFNSGRRSSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVTRGFSTYSEDDGCADGLYTRDL 1182
            RKEMTDTIKADLERL+PTGCG+HFLAPARQ+LLLSVLS+WADL+T+T YRQ    LYGMKWARLMFGREFRVEGVL LWDHIFASS +EG+PD+PECIE VAVAMV+S+R +LLAED TGCLQLLMRYPPDQ VST I LS++L +        R   PS +    S  A          E  P WL  GG+  G      S R P +  +          A  E+ R  GG               FGR+  +E    + +NNWQQGLDEFTRRA+SAAQ VAK AVQTVERTQ GG        G  P +    L+RRLR  CA ME G+  V  AA++I+EVAR+LE R    S R    S                                 +GVTR FSTYSEDDGCAD LYT+DL
Sbjct:   90 RKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTETAYRQ----LYGMKWARLMFGREFRVEGVLVLWDHIFASSWIEGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSLSLAKGQSLAAFERSTEPSSFAAASSGRAAPSSSSEIQQEPAPVWLNRGGRDHGS----VSGRSPSATGSAGH-------APSEWRRDDGGGXXVXXXXXXGRARAFGRDERLETER-EAKNNWQQGLDEFTRRAMSAAQGVAKLAVQTVERTQGGGDPRHLRTAGGVPASEALSLSRRLRTACAKMETGEAPVSLAAQEIKEVARILEARSGAPSVREPLRSTNSMGGGGGG-----------------------QGVTRAFSTYSEDDGCADALYTQDL 472

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BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A6H5KGW7_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW7_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 2.440e-85
Identity = 225/597 (37.69%), Postives = 259/597 (43.38%), Query Frame = 1

Query:    4 RKEMTDTIKADLERLYPTGCGEHFLAPARQQLLLSVLSLWADLHTDTGYRQGMHE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGY----RHAPPSMYLGGLSDTAEDDHLRAGSSESGPAWLMDGGKTGGESGNGF-SRRIPRSNSNHSREQQQRLRAEEEYGRGLGGA-------------GFGREGGIEARGGDMRNNWQQGLDEFTRRALSAAQDVAKRAVQTVERTQHGG--------GSAPGA----LARRLREVCAAMEAGKTSVHAAAEDIREVARLLEGRKEFNSGRRSSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVTRGFSTYSEDDGCADGLYTRDL 1182
            RKEMTDTIKADLERL+PTGCG+HFLAPARQ+LLLSVLS+WADL+T T YRQGMHE                                                                                                                                                                              LYGMKWARLMFGREFRVEGVL LWDHIFASS +EG+PD+PECIE VAVAMV+S+R +LLAED TGCLQLLMRYPPDQ VST I LS++L +        R   PS +    S  A          E  P WL  GG+     G+G  S R P +             A  E+ R  GG               FGR+  +E    + +NNWQQGLDEFTRRA+SAAQ VAK AVQTVERTQ GG        G  P +    L+RRLR  CA +E G+T V  AA++I+EVAR+LE R    S R    S                                 +GVTR FSTYSEDDGCAD LYT+DL
Sbjct:  130 RKEMTDTIKADLERLFPTGCGDHFLAPARQELLLSVLSVWADLNTGTAYRQGMHEVLAPLILVLEKEVAAATRAEAIAGDSTXXXXXXXXXXXXXXXXXXXXXXXXXXVKASPWVGKSIVNGEPLNAGTHPAFAAILGHGSTPEDLEADAFWLFSAVMSGLERFYEHGEKATSTSALGAGRGGGEGGSVDSPVVEMCKRLQGVRMRAADPELQQHLSHLDISPQAGYLKLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIEGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQDVSTAISLSLSLAKGQSLAAFERSTEPSSFSAASSGRAAPSSSSEIQQEPAPVWLNRGGR-----GHGIISGRSPSATGRAGH-------APSEWRRDDGGGXXVXXXXXXGRARAFGRDERLETER-EAKNNWQQGLDEFTRRAMSAAQGVAKLAVQTVERTQGGGDPRHLRTAGGVPASEALSLSRRLRTACAKLETGETPVSLAAQEIKEVARILEARSGAPSVREPLRSTNSMGSGGGG-----------------------QGVTRAFSTYSEDDGCADALYTQDL 690

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BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A444TDY5_ARMVU (TBC1 domain family member 5 n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444TDY5_ARMVU)

HSP 1 Score: 87.0 bits (214), Expect = 5.040e-14
Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 1

Query:  166 ELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGG------YRHAPPSMY-LGGLSDTAEDDHLRAGS 528
            ++YG++W RLMFGREF    +L +WD IFA S           IE + VAM+  ++D+LL  D T CL LLMRYPP   V ++I  ++   +P G      Y++ P S+  +GG  +       R GS
Sbjct:  406 QVYGIRWVRLMFGREFSFTDLLMVWDAIFADSYSNFL-----LIEYLMVAMLSYIKDQLLEADYTSCLSLLMRYPPSSDVQSIIQTALYFRKPDGSNIPRKYKNVPASLATVGGQQNIHRSPQTRHGS 528

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BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A1B6M3J3_9HEMI (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6M3J3_9HEMI)

HSP 1 Score: 80.1 bits (196), Expect = 5.770e-14
Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 1

Query:   67 EHFLAPARQQLLLSVLSLWADLHTDTGYRQGMHELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGY 453
            EH LAP           L  +LH           L+G++W RL+FGREF ++ +L +WD IFA    EG   + + +  V +AM++++R +LL  D TGCL +LM+YP    VS +ID ++ L  P  Y
Sbjct:    1 EHLLAP-----------LDPELHQHLQQMNVTLPLFGIRWLRLLFGREFPLQDLLVMWDAIFA----EG--SMFQLVNYVVIAMLMAIRRQLLISDHTGCLTILMKYPA-MDVSKIIDRALFLKNPQTY 111

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BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A5N5TGS9_9CRUS (TBC1 domain family member 5 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5TGS9_9CRUS)

HSP 1 Score: 87.0 bits (214), Expect = 6.300e-14
Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 1

Query:  166 ELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGG------YRHAPPSMY-LGGLSDTAEDDHLRAGS 528
            ++YG++W RLMFGREF    +L +WD IFA S           IE + VAM+  ++D+LL  D T CL LLMRYPP   V ++I  ++   +P G      Y++ P S+  +GG  +       R GS
Sbjct:  358 QVYGIRWVRLMFGREFSFTDLLMVWDAIFADSYSNFL-----LIEYLMVAMLSYIKDQLLEADYTSCLSLLMRYPPSSDVQSIIQTALYFRKPDGSNIPRKYKNVPASLATVGGQQNIHRSPQTRHGS 480

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BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A2Z6QHF3_9GLOM (Rab-GAP TBC domain-containing protein n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QHF3_9GLOM)

HSP 1 Score: 87.0 bits (214), Expect = 7.550e-14
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 1

Query:  127 DLHTDTGYRQGMHELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIAL 435
            +LH      +   +LYG++W RL+FGREF ++ VL LWD IFA       P L   ++ V VAM+L +RD+LL  D TGCL +LMRYPP      +I  +I L
Sbjct:  279 ELHERLNELEIEPQLYGIRWIRLLFGREFPLDKVLTLWDGIFAED-----PTL-RIVDHVCVAMMLLIRDDLLKSDYTGCLSMLMRYPPTSDTGVLIKQAIYL 375

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BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A812ASD9_SEPPH (TBC1D5 n=6 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812ASD9_SEPPH)

HSP 1 Score: 86.7 bits (213), Expect = 1.170e-13
Identity = 45/118 (38.14%), Postives = 67/118 (56.78%), Query Frame = 1

Query:  124 ADLHTDTGYRQGMHELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGYRHAPPSMY 477
            A+LH      + + ++YG++W RL+FGREF ++ +L LWD IFA  +  G     + ++ V V M+L +RD LL  D   C+  LMRYPP   V   +D ++ L +P  Y   PP  Y
Sbjct:  783 AELHLHLERLEIVPQIYGIRWVRLLFGREFPMQDLLMLWDAIFADGI--GF----DLVDYVFVGMLLYIRDLLLTSDYPNCMNTLMRYPPVGDVHYFVDKALYLREPNQYPRPPPYSY 894

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BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A8H6A922_ASPBU (Rab-GAP TBC domain-containing protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A8H6A922_ASPBU)

HSP 1 Score: 85.5 bits (210), Expect = 1.580e-13
Identity = 54/153 (35.29%), Postives = 81/153 (52.94%), Query Frame = 1

Query:    7 KEMTDTIKADLERLYPTGCGEHFLAPARQQLLLSVLSLWADLHTDTGYRQGMH------------ELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYP---PDQSVSTVID 420
            ++M   I  D++R         F  PA +  +  VL ++A L+ D GYRQ +             +++  +W RL+FGREF  E VL LWD +F+  L       PE ++ V VAM+L +R +LLA DS+  L +L+RYP   P +  S V+D
Sbjct:  110 EQMRADISQDVDRCLQENF--FFREPATKAKMTDVLFIYAKLNPDLGYRQDLELADHLQAQEILPQIFLTRWMRLLFGREFPFEDVLILWDFLFSEGLR------PELVDYVCVAMLLRIRWQLLAADSSTVLTMLLRYPSPHPHEPYSFVLD 254

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BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A8D9DY72_9HEMI (TBC1 domain family member 5 n=4 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9DY72_9HEMI)

HSP 1 Score: 85.5 bits (210), Expect = 1.790e-13
Identity = 49/135 (36.30%), Postives = 73/135 (54.07%), Query Frame = 1

Query:   67 EHFLAPARQQLLLSVLSLWADLHTDTGYRQGMHELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGYRHAPPS 471
            EH L PA   L   + +L   L            L+G++W RL+FGREF ++ +L LWD IFA S         E +  V VAM++++RD++++ D   CL  LMRYPP   V+++I+ ++ L  P  Y    PS
Sbjct:  313 EHILKPADPALHAQLYNLKIPL-----------TLFGIRWLRLLFGREFSLQDLLVLWDVIFAESF--------ELVNYVVVAMLVAIRDQVISSDHIECLSYLMRYPPGIDVNSIIEHALHLKYPNLYPEYEPS 428

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BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Match: A0A4V5ZYV7_STECR (Rab-GAP TBC domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4V5ZYV7_STECR)

HSP 1 Score: 81.6 bits (200), Expect = 2.050e-13
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 1

Query:  166 ELYGMKWARLMFGREFRVEGVLQLWDHIFASSLLEGRPDLPECIEEVAVAMVLSVRDELLAEDSTGCLQLLMRYPPDQSVSTVIDLSIALGQPGGYRHAPPSM 474
            ++YG++W RL+FGREF +  +L LWD IFA      +P L   ++ + +AM+L +RD LLA D + CLQ LMRYPP   V + I L++ L  P  +   P  +
Sbjct:  106 QIYGIRWLRLLFGREFPMPDLLCLWDAIFAD-----KPTLV-LVDFIFIAMLLQIRDLLLAGDYSMCLQYLMRYPPTVDVHSFIQLALYLKSPKKFARPPAGV 202

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig9979.24096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
D7FWI0_ECTSI	3.650e-110	52.13	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KGW7_9PHAE	2.440e-85	37.69	Rab-GAP TBC domain-containing protein n=1 Tax=Ecto...	[more]
A0A444TDY5_ARMVU	5.040e-14	38.28	TBC1 domain family member 5 n=1 Tax=Armadillidium ...	[more]
A0A1B6M3J3_9HEMI	5.770e-14	37.21	Rab-GAP TBC domain-containing protein (Fragment) n...	[more]
A0A5N5TGS9_9CRUS	6.300e-14	38.28	TBC1 domain family member 5 n=1 Tax=Armadillidium ...	[more]
A0A2Z6QHF3_9GLOM	7.550e-14	44.66	Rab-GAP TBC domain-containing protein n=2 Tax=Rhiz...	[more]
A0A812ASD9_SEPPH	1.170e-13	38.14	TBC1D5 n=6 Tax=Sepia pharaonis TaxID=158019 RepID=...	[more]
A0A8H6A922_ASPBU	1.580e-13	35.29	Rab-GAP TBC domain-containing protein n=3 Tax=Aspe...	[more]
A0A8D9DY72_9HEMI	1.790e-13	36.30	TBC1 domain family member 5 n=4 Tax=Cacopsylla mel...	[more]
A0A4V5ZYV7_STECR	2.050e-13	41.75	Rab-GAP TBC domain-containing protein n=1 Tax=Stei...	[more]

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Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	355.1
Seed ortholog evalue	4.1e-95
Seed eggNOG ortholog	2880.D7FWI0
Preferred name	TBC1D5
KEGG rclass	RC00002,RC00078
KEGG ko	ko:K01765,ko:K03843,ko:K18081,ko:K18469
KEGG Reaction	R03428,R03429,R05973,R06238
KEGG Pathway	ko00510,ko00513,ko00562,ko01100,ko04070,map00510,map00513,map00562,map01100,map04070
KEGG Module	M00055,M00132
GOs	GO:0002090,GO:0002092,GO:0003674,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005773,GO:0005776,GO:0005794,GO:0005802,GO:0005829,GO:0006810,GO:0006886,GO:0006914,GO:0006950,GO:0007154,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0007193,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009410,GO:0009605,GO:0009893,GO:0009987,GO:0009991,GO:0010008,GO:0010033,GO:0010243,GO:0010604,GO:0012505,GO:0014070,GO:0014074,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016197,GO:0016236,GO:0016482,GO:0017016,GO:0017137,GO:0019222,GO:0019899,GO:0023052,GO:0030100,GO:0030234,GO:0030695,GO:0030904,GO:0031000,GO:0031090,GO:0031156,GO:0031267,GO:0031323,GO:0031325,GO:0031338,GO:0031410,GO:0031667,GO:0031982,GO:0031984,GO:0032879,GO:0032991,GO:0033036,GO:0033043,GO:0034613,GO:0035612,GO:0036270,GO:0042147,GO:0042221,GO:0042493,GO:0042594,GO:0042886,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043279,GO:0043547,GO:0043900,GO:0044093,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045807,GO:0046907,GO:0048259,GO:0048260,GO:0048518,GO:0048519,GO:0048522,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060589,GO:0060627,GO:0061919,GO:0065007,GO:0065009,GO:0070727,GO:0071702,GO:0071705,GO:0090630,GO:0097708,GO:0098588,GO:0098772,GO:0098791,GO:0098796,GO:0098805,GO:1901698,GO:1903664,GO:1903665,GO:1905394
EggNOG free text desc.	regulation of vesicle fusion
EggNOG OGs	COG5210@1,KOG1091@2759
Ec32 ortholog description	Rab-GTPase-TBC domain
Ec32 ortholog	Ec-26_006540.1
EC	2.4.1.132,2.4.1.257,2.7.1.159,3.1.3.64,3.1.3.95
COG Functional cat.	H
CAZy	GT4
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000,ko01003,ko01009,ko04131
Hectar predicted targeting category	other localisation
Exons	5
Model size	2330
Cds size	1173
Stop	1
Start	1