mRNA_P-canaliculata_contig99683.24084.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: UPI001678EA1F (30S ribosomal protein S1 n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI001678EA1F) HSP 1 Score: 648 bits (1671), Expect = 9.020e-231 Identity = 331/346 (95.66%), Postives = 336/346 (97.11%), Query Frame = 1 Query: 1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGEENDVKAFIRKGDLS 1038
VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELV +LKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTV VKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQ+NPWDDFSDRFPLGSVV GEVRSITEFGLFIGLDG+IDGMAHLSDLSWDKSGEEAL DY KGD VEAKILEVD +KERISLGIKQL KD+APAGA GANRGATVTCTV NVQPAGLDVTFGEENDVKAFIRKGDLS
Sbjct: 148 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVGQLKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVAVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQSNPWDDFSDRFPLGSVVKGEVRSITEFGLFIGLDGDIDGMAHLSDLSWDKSGEEALADYKKGDEVEAKILEVDIDKERISLGIKQLVKDTAPAGATGANRGATVTCTVTNVQPAGLDVTFGEENDVKAFIRKGDLS 493
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A8J3CSY5_9PROT (30S ribosomal protein S1 n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CSY5_9PROT) HSP 1 Score: 597 bits (1538), Expect = 1.590e-210 Identity = 299/347 (86.17%), Postives = 325/347 (93.66%), Query Frame = 1 Query: 1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGEEN-DVKAFIRKGDLS 1038
VRDIGPLMG QPFMILKMD+SRGNIVVSRRAILEESRAEQRAELVA+L+EGE R+GVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVK+IRINPETQRISLGMKQLQ+DPWNAAAAKYTPGTRHTG VTNIADYGAFIELEEGVEGLVHVSEMSWTKKN+HPGKIVSTSQ++EVEVLDVD+EKRRISLG+KQVQANPWD F++RFP+GS ++GEV+S+TEFGLFIGL+ +IDGMAHLSDLSWDKSGEEALKDY KGD VEAKILEVD EKERISLG+KQL +D+ P GA +G TVTCTV NVQPAGLDVTFGE+ +V AFIRKGDLS
Sbjct: 150 VRDIGPLMGSEQPFMILKMDKSRGNIVVSRRAILEESRAEQRAELVAQLQEGEVREGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKVIRINPETQRISLGMKQLQDDPWNAAAAKYTPGTRHTGRVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVEVLDVDEEKRRISLGLKQVQANPWDSFTERFPVGSTISGEVKSVTEFGLFIGLEDDIDGMAHLSDLSWDKSGEEALKDYNKGDMVEAKILEVDVEKERISLGVKQLERDTMPEGAKSFGKGNTVTCTVTNVQPAGLDVTFGEDEVEVAAFIRKGDLS 496
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: UPI000420A54C (30S ribosomal protein S1 n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000420A54C) HSP 1 Score: 594 bits (1532), Expect = 1.390e-209 Identity = 303/347 (87.32%), Postives = 321/347 (92.51%), Query Frame = 1 Query: 1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAA-GANRGATVTCTVVNVQPAGLDVTFGEENDVKAFIRKGDLS 1038
VRDIGPLM Q QPFMILKMDR+RGNIVVSRRAILEESRAEQRAELV +L EGETR+GVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVL VGDTV VKIIRINPETQRISLGMKQLQEDPW AAAAKYT GTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQ+++VEVL+VDQEKRRISLGIKQVQ NPWD F+DRFP+GS ++GEVRS+TEFGLFIGLDG+IDGMAHLSDLSWDKSGEEAL+DY KGDTVEAKILEVD EKERISLG+KQL KD+ P G G RG TVTCTV NVQ AGLDVT GE+ND+ AFIRKGDLS
Sbjct: 153 VRDIGPLMNQEQPFMILKMDRTRGNIVVSRRAILEESRAEQRAELVGQLAEGETREGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLAVGDTVAVKIIRINPETQRISLGMKQLQEDPWLAAAAKYTVGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQEVDVEVLEVDQEKRRISLGIKQVQDNPWDSFTDRFPVGSTISGEVRSVTEFGLFIGLDGDIDGMAHLSDLSWDKSGEEALQDYKKGDTVEAKILEVDIEKERISLGVKQLVKDTGPTGGGKGILRGKTVTCTVTNVQQAGLDVTIGEDNDIVAFIRKGDLS 499
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A420WDK7_9PROT (30S ribosomal protein S1 n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WDK7_9PROT) HSP 1 Score: 589 bits (1519), Expect = 1.270e-207 Identity = 296/347 (85.30%), Postives = 322/347 (92.80%), Query Frame = 1 Query: 1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGE-ENDVKAFIRKGDLS 1038
VRD+GPLM +TQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELV +L EGETR+GVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTV+VKI+RINPETQRISLGMKQLQEDPWN AAAKYT G+RHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKN+HPGKIVSTSQ+++VEVL+VDQEKRRISLGIKQVQ NPWD F+DRFP+GS + GEVRS+TEFGLFIGLDG+IDGMAHLSDLSW+KSGEEAL+DY KGD VEAKILEVD EKERISLGIKQL KD+ P+G+AG NRG TVTCTV V G++VTFGE + + AFIRKGDLS
Sbjct: 150 VRDVGPLMNETQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVGQLAEGETREGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVKVKIVRINPETQRISLGMKQLQEDPWNIAAAKYTVGSRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVEVLEVDQEKRRISLGIKQVQDNPWDSFTDRFPVGSTIKGEVRSVTEFGLFIGLDGDIDGMAHLSDLSWEKSGEEALQDYKKGDEVEAKILEVDIEKERISLGIKQLVKDTMPSGSAGVNRGTTVTCTVKEVNSGGIEVTFGEGDAEATAFIRKGDLS 496
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A848V0V8_9PROT (30S ribosomal protein S1 n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V0V8_9PROT) HSP 1 Score: 568 bits (1464), Expect = 2.590e-199 Identity = 280/346 (80.92%), Postives = 317/346 (91.62%), Query Frame = 1 Query: 1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGEENDVKAFIRKGDLS 1038
VRD+GPLM Q QPFMILKMDR+RGNIVVSRRAILEESRAEQRAELV +L+EGETR+GVVKNITDYGAFVDLGGIDGLLHVTDMSWRR+SHPSQV+ VGDT++VKII+INPE+QRISLGMKQL +DPW AA AKY PGTRH G VTNI DYGAFIELEEGVEGLVHVSEMSWTKKN+HPGKIVSTSQ++E EVL+V++EKRRISLG+KQ Q+NPWD F+DRFP+G+V+ GEVRS+TEFGLFIGLDG+IDGMAHLSDLSWDKSGE+ALKDY KGD VEAKILE+DT KERISLGIKQL+KD+APAGA RGATVTCTV V G++V+FG++N++ AFIRK DLS
Sbjct: 151 VRDVGPLMNQEQPFMILKMDRARGNIVVSRRAILEESRAEQRAELVGQLEEGETREGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRISHPSQVMAVGDTLKVKIIKINPESQRISLGMKQLMDDPWLAATAKYKPGTRHKGIVTNITDYGAFIELEEGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVECEVLEVEEEKRRISLGLKQTQSNPWDSFADRFPVGTVINGEVRSVTEFGLFIGLDGDIDGMAHLSDLSWDKSGEDALKDYKKGDQVEAKILEIDTNKERISLGIKQLSKDTAPAGA---RRGATVTCTVTAVNSGGIEVSFGDDNEIAAFIRKSDLS 493
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A7Y1SMK4_9PROT (30S ribosomal protein S1 n=2 Tax=Bacteria TaxID=2 RepID=A0A7Y1SMK4_9PROT) HSP 1 Score: 555 bits (1429), Expect = 6.540e-194 Identity = 284/347 (81.84%), Postives = 309/347 (89.05%), Query Frame = 1 Query: 1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAP-AGAAGANRGATVTCTVVNVQPAGLDVTFGEENDVKAFIRKGDLS 1038
VRDIGPLMGQ QPFMILKMDR RGNIVVSRRAILEESRAEQRAELV +L EGE R+G+VKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVL VGDTV+VKIIRINPETQRISLGMKQL EDPW AA A Y GT+ TG V+NIADYGAFIELEEGVEGLVHVSEMSWTKKN+HPGKIVSTSQ++EV VL+VD EKRRISLGIKQ Q NPWD F+D++P+G+V+ GEVRSITEFGLFIGLDGEIDGMAHLSDLSW+KSGE+AL DY KGD VEAKILEVD EKERISLGIKQLTKD+ A AA A+RG TVTCTV + GL V++GEEN++ AFIRK DLS
Sbjct: 153 VRDIGPLMGQEQPFMILKMDRPRGNIVVSRRAILEESRAEQRAELVGQLAEGEEREGIVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLAVGDTVKVKIIRINPETQRISLGMKQLTEDPWLAAVANYPVGTKLTGKVSNIADYGAFIELEEGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVVVLEVDPEKRRISLGIKQTQENPWDSFTDKYPVGTVIKGEVRSITEFGLFIGLDGEIDGMAHLSDLSWEKSGEDALADYTKGDMVEAKILEVDIEKERISLGIKQLTKDTGRGASAASASRGKTVTCTVTEITTGGLAVSYGEENEITAFIRKSDLS 499
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: UPI000476AA29 (30S ribosomal protein S1 n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI000476AA29) HSP 1 Score: 545 bits (1404), Expect = 3.440e-190 Identity = 274/347 (78.96%), Postives = 306/347 (88.18%), Query Frame = 1 Query: 1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGEE-NDVKAFIRKGDLS 1038
VRD+GPLM Q QPFMILKMDR RGNIVVSRRA+LEESRAEQRAELV +L EGETR+G+VKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVL+VGDTV+VK+IRIN +TQRISLGMKQL EDPW+A AKY GTR TGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKN+HPGKIVSTS+Q++VEVL+VD+EKRRISLGIKQ Q NPWD F+ FP+G++V GEVRSITEFGLFIGLDG+IDGMAHLSDLSWD SGEEAL Y KGD VEAKILEVDT+KERISLG+KQL KD+ + + RG TVTCTV V G++V+FG+E ++ AFIRK DLS
Sbjct: 147 VRDVGPLMNQDQPFMILKMDRPRGNIVVSRRAVLEESRAEQRAELVGQLAEGETREGIVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLSVGDTVKVKVIRINSDTQRISLGMKQLMEDPWDAVTAKYQVGTRLTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNVHPGKIVSTSEQVDVEVLEVDEEKRRISLGIKQTQENPWDSFARDFPVGTIVKGEVRSITEFGLFIGLDGDIDGMAHLSDLSWDMSGEEALASYNKGDVVEAKILEVDTDKERISLGVKQLVKDTGLSAGSSTGRGKTVTCTVTEVNSGGIEVSFGDEGSETSAFIRKADLS 493
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A2G2GI52_9PROT (30S ribosomal protein S1 n=2 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2GI52_9PROT) HSP 1 Score: 543 bits (1398), Expect = 2.620e-189 Identity = 276/346 (79.77%), Postives = 303/346 (87.57%), Query Frame = 1 Query: 1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGEENDVKAFIRKGDLS 1038
VRD+ PLM Q QPFMILKMDR RGNIVVSRRAILEESRAEQRAELV+ L EGE R+G+VKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVL V TV+VKIIRINPETQRISLGMKQL EDPW AA AKY GT+ G V+NIADYGAF+ELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQ+I++ VL+VD EKRRISLGIKQ+ NPWD F+DRFP+GS + GEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEAL +Y KGD VEAKILEVD EKERISLG+KQLTKD+ GA+RG TVTCT+ V G++VT+G++N+ KAFIRK DLS
Sbjct: 150 VRDVTPLMNQDQPFMILKMDRPRGNIVVSRRAILEESRAEQRAELVSNLAEGEEREGIVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLTVDQTVKVKIIRINPETQRISLGMKQLTEDPWLAAVAKYPVGTKLVGKVSNIADYGAFVELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQEIDIIVLEVDPEKRRISLGIKQLMENPWDSFTDRFPVGSTIKGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALSEYTKGDMVEAKILEVDIEKERISLGVKQLTKDT--GAVPGASRGKTVTCTITEVNTGGIEVTYGDDNEGKAFIRKADLS 493
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A2G1YVL3_9PROT (30S ribosomal protein S1 n=2 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G1YVL3_9PROT) HSP 1 Score: 533 bits (1372), Expect = 3.020e-185 Identity = 269/349 (77.08%), Postives = 304/349 (87.11%), Query Frame = 1 Query: 1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSA--PAGAAGANRGATVTCTVVNVQPAGLDVTFGEE-NDVKAFIRKGDLS 1038
VRDI PLM + QPFMILKMDR R NIVVSRRAILEESRAEQRAEL+ LKEGE R+G+VKNITDYGAFVDLGGIDGLLHVTDMSW R+SHPSQVL VGDT++VK+IRIN ETQRISLG+KQL EDPW +A ++Y GT+ TGT++NIADYGAF+ELE+GVEGLVHVSEMSWTKKNIHPGKIVSTSQQ+EV VL+VDQEKRRISLG+KQ+ NPWD F++RFP+G+V+ GEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEAL Y KGD VEAKILEVD +KERISLG+KQLTKD+ P G A +G TVTC V+ V G++V FGEE ++ KAFIRK DLS
Sbjct: 151 VRDITPLMNEVQPFMILKMDRPRNNIVVSRRAILEESRAEQRAELIENLKEGEEREGIVKNITDYGAFVDLGGIDGLLHVTDMSWSRISHPSQVLTVGDTIKVKLIRINQETQRISLGIKQLSEDPWMSAVSRYPEGTKLTGTISNIADYGAFVELEDGVEGLVHVSEMSWTKKNIHPGKIVSTSQQVEVVVLEVDQEKRRISLGMKQLLGNPWDSFAERFPVGTVINGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALATYTKGDMVEAKILEVDIDKERISLGVKQLTKDTGAGPGGKTSAPKGKTVTCKVIEVNRGGIEVLFGEEGSETKAFIRKNDLS 499
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A2G2MU33_9PROT (30S ribosomal protein S1 n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2MU33_9PROT) HSP 1 Score: 531 bits (1367), Expect = 1.570e-184 Identity = 269/347 (77.52%), Postives = 306/347 (88.18%), Query Frame = 1 Query: 1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGEEN-DVKAFIRKGDLS 1038
VRDIGPLM + QPFM+LKMDR R NIVVSRRAILEESRAEQRAEL+ LKEGE R+G+VKNITDYGAFVDLGGIDGLLHVTDMSW R+SHPSQ+L VGDT++VK+IRINPETQRISLG+KQL EDPW +A A+Y GT+ G V+NIADYGAFIELE+GVEGLVHVSEMSWTKKNIHPGK+VSTSQ+++V VL+VDQEKRRISLG+KQ+Q NPWD F++RFP+G+++ GEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEAL DY KGD VEAKILEVD +KERISLG+KQLTKD+ AG A A RG TVTCTV V G++V FG++ + KAFIRK DLS
Sbjct: 152 VRDIGPLMDKVQPFMLLKMDRPRNNIVVSRRAILEESRAEQRAELIESLKEGEEREGIVKNITDYGAFVDLGGIDGLLHVTDMSWSRISHPSQILAVGDTIKVKLIRINPETQRISLGIKQLSEDPWMSAVARYPAGTKLVGKVSNIADYGAFIELEDGVEGLVHVSEMSWTKKNIHPGKMVSTSQEVDVVVLEVDQEKRRISLGMKQLQDNPWDSFAERFPVGTIINGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALGDYTKGDMVEAKILEVDIDKERISLGVKQLTKDTG-AGPAAA-RGKTVTCTVTEVNRGGIEVKFGDDGAETKAFIRKNDLS 496 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99683.24084.1 >prot_P-canaliculata_contig99683.24084.1 ID=prot_P-canaliculata_contig99683.24084.1|Name=mRNA_P-canaliculata_contig99683.24084.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=339bp MGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGback to top mRNA from alignment at P-canaliculata_contig99683:3..1040+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig99683.24084.1 ID=mRNA_P-canaliculata_contig99683.24084.1|Name=mRNA_P-canaliculata_contig99683.24084.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1038bp|location=Sequence derived from alignment at P-canaliculata_contig99683:3..1040+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig99683:3..1040+ >mRNA_P-canaliculata_contig99683.24084.1 ID=mRNA_P-canaliculata_contig99683.24084.1|Name=mRNA_P-canaliculata_contig99683.24084.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2034bp|location=Sequence derived from alignment at P-canaliculata_contig99683:3..1040+ (Pelvetia canaliculata dioecious)back to top |