mRNA_P-canaliculata_contig99683.24084.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig99683.24084.1
Unique NamemRNA_P-canaliculata_contig99683.24084.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: UPI001678EA1F (30S ribosomal protein S1 n=1 Tax=Litorimonas cladophorae TaxID=1220491 RepID=UPI001678EA1F)

HSP 1 Score: 648 bits (1671), Expect = 9.020e-231
Identity = 331/346 (95.66%), Postives = 336/346 (97.11%), Query Frame = 1
Query:    1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGEENDVKAFIRKGDLS 1038
            VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELV +LKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTV VKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQ+NPWDDFSDRFPLGSVV GEVRSITEFGLFIGLDG+IDGMAHLSDLSWDKSGEEAL DY KGD VEAKILEVD +KERISLGIKQL KD+APAGA GANRGATVTCTV NVQPAGLDVTFGEENDVKAFIRKGDLS
Sbjct:  148 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVGQLKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVAVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQSNPWDDFSDRFPLGSVVKGEVRSITEFGLFIGLDGDIDGMAHLSDLSWDKSGEEALADYKKGDEVEAKILEVDIDKERISLGIKQLVKDTAPAGATGANRGATVTCTVTNVQPAGLDVTFGEENDVKAFIRKGDLS 493          
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A8J3CSY5_9PROT (30S ribosomal protein S1 n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CSY5_9PROT)

HSP 1 Score: 597 bits (1538), Expect = 1.590e-210
Identity = 299/347 (86.17%), Postives = 325/347 (93.66%), Query Frame = 1
Query:    1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGEEN-DVKAFIRKGDLS 1038
            VRDIGPLMG  QPFMILKMD+SRGNIVVSRRAILEESRAEQRAELVA+L+EGE R+GVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVK+IRINPETQRISLGMKQLQ+DPWNAAAAKYTPGTRHTG VTNIADYGAFIELEEGVEGLVHVSEMSWTKKN+HPGKIVSTSQ++EVEVLDVD+EKRRISLG+KQVQANPWD F++RFP+GS ++GEV+S+TEFGLFIGL+ +IDGMAHLSDLSWDKSGEEALKDY KGD VEAKILEVD EKERISLG+KQL +D+ P GA    +G TVTCTV NVQPAGLDVTFGE+  +V AFIRKGDLS
Sbjct:  150 VRDIGPLMGSEQPFMILKMDKSRGNIVVSRRAILEESRAEQRAELVAQLQEGEVREGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKVIRINPETQRISLGMKQLQDDPWNAAAAKYTPGTRHTGRVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVEVLDVDEEKRRISLGLKQVQANPWDSFTERFPVGSTISGEVKSVTEFGLFIGLEDDIDGMAHLSDLSWDKSGEEALKDYNKGDMVEAKILEVDVEKERISLGVKQLERDTMPEGAKSFGKGNTVTCTVTNVQPAGLDVTFGEDEVEVAAFIRKGDLS 496          
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: UPI000420A54C (30S ribosomal protein S1 n=1 Tax=Hellea balneolensis TaxID=287478 RepID=UPI000420A54C)

HSP 1 Score: 594 bits (1532), Expect = 1.390e-209
Identity = 303/347 (87.32%), Postives = 321/347 (92.51%), Query Frame = 1
Query:    1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAA-GANRGATVTCTVVNVQPAGLDVTFGEENDVKAFIRKGDLS 1038
            VRDIGPLM Q QPFMILKMDR+RGNIVVSRRAILEESRAEQRAELV +L EGETR+GVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVL VGDTV VKIIRINPETQRISLGMKQLQEDPW AAAAKYT GTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQ+++VEVL+VDQEKRRISLGIKQVQ NPWD F+DRFP+GS ++GEVRS+TEFGLFIGLDG+IDGMAHLSDLSWDKSGEEAL+DY KGDTVEAKILEVD EKERISLG+KQL KD+ P G   G  RG TVTCTV NVQ AGLDVT GE+ND+ AFIRKGDLS
Sbjct:  153 VRDIGPLMNQEQPFMILKMDRTRGNIVVSRRAILEESRAEQRAELVGQLAEGETREGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLAVGDTVAVKIIRINPETQRISLGMKQLQEDPWLAAAAKYTVGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQEVDVEVLEVDQEKRRISLGIKQVQDNPWDSFTDRFPVGSTISGEVRSVTEFGLFIGLDGDIDGMAHLSDLSWDKSGEEALQDYKKGDTVEAKILEVDIEKERISLGVKQLVKDTGPTGGGKGILRGKTVTCTVTNVQQAGLDVTIGEDNDIVAFIRKGDLS 499          
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A420WDK7_9PROT (30S ribosomal protein S1 n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WDK7_9PROT)

HSP 1 Score: 589 bits (1519), Expect = 1.270e-207
Identity = 296/347 (85.30%), Postives = 322/347 (92.80%), Query Frame = 1
Query:    1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGE-ENDVKAFIRKGDLS 1038
            VRD+GPLM +TQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELV +L EGETR+GVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTV+VKI+RINPETQRISLGMKQLQEDPWN AAAKYT G+RHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKN+HPGKIVSTSQ+++VEVL+VDQEKRRISLGIKQVQ NPWD F+DRFP+GS + GEVRS+TEFGLFIGLDG+IDGMAHLSDLSW+KSGEEAL+DY KGD VEAKILEVD EKERISLGIKQL KD+ P+G+AG NRG TVTCTV  V   G++VTFGE + +  AFIRKGDLS
Sbjct:  150 VRDVGPLMNETQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVGQLAEGETREGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVKVKIVRINPETQRISLGMKQLQEDPWNIAAAKYTVGSRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVEVLEVDQEKRRISLGIKQVQDNPWDSFTDRFPVGSTIKGEVRSVTEFGLFIGLDGDIDGMAHLSDLSWEKSGEEALQDYKKGDEVEAKILEVDIEKERISLGIKQLVKDTMPSGSAGVNRGTTVTCTVKEVNSGGIEVTFGEGDAEATAFIRKGDLS 496          
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A848V0V8_9PROT (30S ribosomal protein S1 n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V0V8_9PROT)

HSP 1 Score: 568 bits (1464), Expect = 2.590e-199
Identity = 280/346 (80.92%), Postives = 317/346 (91.62%), Query Frame = 1
Query:    1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGEENDVKAFIRKGDLS 1038
            VRD+GPLM Q QPFMILKMDR+RGNIVVSRRAILEESRAEQRAELV +L+EGETR+GVVKNITDYGAFVDLGGIDGLLHVTDMSWRR+SHPSQV+ VGDT++VKII+INPE+QRISLGMKQL +DPW AA AKY PGTRH G VTNI DYGAFIELEEGVEGLVHVSEMSWTKKN+HPGKIVSTSQ++E EVL+V++EKRRISLG+KQ Q+NPWD F+DRFP+G+V+ GEVRS+TEFGLFIGLDG+IDGMAHLSDLSWDKSGE+ALKDY KGD VEAKILE+DT KERISLGIKQL+KD+APAGA    RGATVTCTV  V   G++V+FG++N++ AFIRK DLS
Sbjct:  151 VRDVGPLMNQEQPFMILKMDRARGNIVVSRRAILEESRAEQRAELVGQLEEGETREGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRISHPSQVMAVGDTLKVKIIKINPESQRISLGMKQLMDDPWLAATAKYKPGTRHKGIVTNITDYGAFIELEEGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVECEVLEVEEEKRRISLGLKQTQSNPWDSFADRFPVGTVINGEVRSVTEFGLFIGLDGDIDGMAHLSDLSWDKSGEDALKDYKKGDQVEAKILEIDTNKERISLGIKQLSKDTAPAGA---RRGATVTCTVTAVNSGGIEVSFGDDNEIAAFIRKSDLS 493          
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A7Y1SMK4_9PROT (30S ribosomal protein S1 n=2 Tax=Bacteria TaxID=2 RepID=A0A7Y1SMK4_9PROT)

HSP 1 Score: 555 bits (1429), Expect = 6.540e-194
Identity = 284/347 (81.84%), Postives = 309/347 (89.05%), Query Frame = 1
Query:    1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAP-AGAAGANRGATVTCTVVNVQPAGLDVTFGEENDVKAFIRKGDLS 1038
            VRDIGPLMGQ QPFMILKMDR RGNIVVSRRAILEESRAEQRAELV +L EGE R+G+VKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVL VGDTV+VKIIRINPETQRISLGMKQL EDPW AA A Y  GT+ TG V+NIADYGAFIELEEGVEGLVHVSEMSWTKKN+HPGKIVSTSQ++EV VL+VD EKRRISLGIKQ Q NPWD F+D++P+G+V+ GEVRSITEFGLFIGLDGEIDGMAHLSDLSW+KSGE+AL DY KGD VEAKILEVD EKERISLGIKQLTKD+   A AA A+RG TVTCTV  +   GL V++GEEN++ AFIRK DLS
Sbjct:  153 VRDIGPLMGQEQPFMILKMDRPRGNIVVSRRAILEESRAEQRAELVGQLAEGEEREGIVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLAVGDTVKVKIIRINPETQRISLGMKQLTEDPWLAAVANYPVGTKLTGKVSNIADYGAFIELEEGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVVVLEVDPEKRRISLGIKQTQENPWDSFTDKYPVGTVIKGEVRSITEFGLFIGLDGEIDGMAHLSDLSWEKSGEDALADYTKGDMVEAKILEVDIEKERISLGIKQLTKDTGRGASAASASRGKTVTCTVTEITTGGLAVSYGEENEITAFIRKSDLS 499          
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: UPI000476AA29 (30S ribosomal protein S1 n=1 Tax=Robiginitomaculum antarcticum TaxID=437507 RepID=UPI000476AA29)

HSP 1 Score: 545 bits (1404), Expect = 3.440e-190
Identity = 274/347 (78.96%), Postives = 306/347 (88.18%), Query Frame = 1
Query:    1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGEE-NDVKAFIRKGDLS 1038
            VRD+GPLM Q QPFMILKMDR RGNIVVSRRA+LEESRAEQRAELV +L EGETR+G+VKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVL+VGDTV+VK+IRIN +TQRISLGMKQL EDPW+A  AKY  GTR TGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKN+HPGKIVSTS+Q++VEVL+VD+EKRRISLGIKQ Q NPWD F+  FP+G++V GEVRSITEFGLFIGLDG+IDGMAHLSDLSWD SGEEAL  Y KGD VEAKILEVDT+KERISLG+KQL KD+  +  +   RG TVTCTV  V   G++V+FG+E ++  AFIRK DLS
Sbjct:  147 VRDVGPLMNQDQPFMILKMDRPRGNIVVSRRAVLEESRAEQRAELVGQLAEGETREGIVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLSVGDTVKVKVIRINSDTQRISLGMKQLMEDPWDAVTAKYQVGTRLTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNVHPGKIVSTSEQVDVEVLEVDEEKRRISLGIKQTQENPWDSFARDFPVGTIVKGEVRSITEFGLFIGLDGDIDGMAHLSDLSWDMSGEEALASYNKGDVVEAKILEVDTDKERISLGVKQLVKDTGLSAGSSTGRGKTVTCTVTEVNSGGIEVSFGDEGSETSAFIRKADLS 493          
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A2G2GI52_9PROT (30S ribosomal protein S1 n=2 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2GI52_9PROT)

HSP 1 Score: 543 bits (1398), Expect = 2.620e-189
Identity = 276/346 (79.77%), Postives = 303/346 (87.57%), Query Frame = 1
Query:    1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGEENDVKAFIRKGDLS 1038
            VRD+ PLM Q QPFMILKMDR RGNIVVSRRAILEESRAEQRAELV+ L EGE R+G+VKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVL V  TV+VKIIRINPETQRISLGMKQL EDPW AA AKY  GT+  G V+NIADYGAF+ELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQ+I++ VL+VD EKRRISLGIKQ+  NPWD F+DRFP+GS + GEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEAL +Y KGD VEAKILEVD EKERISLG+KQLTKD+      GA+RG TVTCT+  V   G++VT+G++N+ KAFIRK DLS
Sbjct:  150 VRDVTPLMNQDQPFMILKMDRPRGNIVVSRRAILEESRAEQRAELVSNLAEGEEREGIVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLTVDQTVKVKIIRINPETQRISLGMKQLTEDPWLAAVAKYPVGTKLVGKVSNIADYGAFVELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQEIDIIVLEVDPEKRRISLGIKQLMENPWDSFTDRFPVGSTIKGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALSEYTKGDMVEAKILEVDIEKERISLGVKQLTKDT--GAVPGASRGKTVTCTITEVNTGGIEVTYGDDNEGKAFIRKADLS 493          
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A2G1YVL3_9PROT (30S ribosomal protein S1 n=2 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G1YVL3_9PROT)

HSP 1 Score: 533 bits (1372), Expect = 3.020e-185
Identity = 269/349 (77.08%), Postives = 304/349 (87.11%), Query Frame = 1
Query:    1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSA--PAGAAGANRGATVTCTVVNVQPAGLDVTFGEE-NDVKAFIRKGDLS 1038
            VRDI PLM + QPFMILKMDR R NIVVSRRAILEESRAEQRAEL+  LKEGE R+G+VKNITDYGAFVDLGGIDGLLHVTDMSW R+SHPSQVL VGDT++VK+IRIN ETQRISLG+KQL EDPW +A ++Y  GT+ TGT++NIADYGAF+ELE+GVEGLVHVSEMSWTKKNIHPGKIVSTSQQ+EV VL+VDQEKRRISLG+KQ+  NPWD F++RFP+G+V+ GEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEAL  Y KGD VEAKILEVD +KERISLG+KQLTKD+   P G   A +G TVTC V+ V   G++V FGEE ++ KAFIRK DLS
Sbjct:  151 VRDITPLMNEVQPFMILKMDRPRNNIVVSRRAILEESRAEQRAELIENLKEGEEREGIVKNITDYGAFVDLGGIDGLLHVTDMSWSRISHPSQVLTVGDTIKVKLIRINQETQRISLGIKQLSEDPWMSAVSRYPEGTKLTGTISNIADYGAFVELEDGVEGLVHVSEMSWTKKNIHPGKIVSTSQQVEVVVLEVDQEKRRISLGMKQLLGNPWDSFAERFPVGTVINGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALATYTKGDMVEAKILEVDIDKERISLGVKQLTKDTGAGPGGKTSAPKGKTVTCKVIEVNRGGIEVLFGEEGSETKAFIRKNDLS 499          
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Match: A0A2G2MU33_9PROT (30S ribosomal protein S1 n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2MU33_9PROT)

HSP 1 Score: 531 bits (1367), Expect = 1.570e-184
Identity = 269/347 (77.52%), Postives = 306/347 (88.18%), Query Frame = 1
Query:    1 VRDIGPLMGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDGVVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIRINPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELEEGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIKQVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAGANRGATVTCTVVNVQPAGLDVTFGEEN-DVKAFIRKGDLS 1038
            VRDIGPLM + QPFM+LKMDR R NIVVSRRAILEESRAEQRAEL+  LKEGE R+G+VKNITDYGAFVDLGGIDGLLHVTDMSW R+SHPSQ+L VGDT++VK+IRINPETQRISLG+KQL EDPW +A A+Y  GT+  G V+NIADYGAFIELE+GVEGLVHVSEMSWTKKNIHPGK+VSTSQ+++V VL+VDQEKRRISLG+KQ+Q NPWD F++RFP+G+++ GEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEAL DY KGD VEAKILEVD +KERISLG+KQLTKD+  AG A A RG TVTCTV  V   G++V FG++  + KAFIRK DLS
Sbjct:  152 VRDIGPLMDKVQPFMLLKMDRPRNNIVVSRRAILEESRAEQRAELIESLKEGEEREGIVKNITDYGAFVDLGGIDGLLHVTDMSWSRISHPSQILAVGDTIKVKLIRINPETQRISLGIKQLSEDPWMSAVARYPAGTKLVGKVSNIADYGAFIELEDGVEGLVHVSEMSWTKKNIHPGKMVSTSQEVDVVVLEVDQEKRRISLGMKQLQDNPWDSFAERFPVGTIINGEVRSITEFGLFIGLDGEIDGMAHLSDLSWDKSGEEALGDYTKGDMVEAKILEVDIDKERISLGVKQLTKDTG-AGPAAA-RGKTVTCTVTEVNRGGIEVKFGDDGAETKAFIRKNDLS 496          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99683.24084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001678EA1F9.020e-23195.6630S ribosomal protein S1 n=1 Tax=Litorimonas clado... [more]
A0A8J3CSY5_9PROT1.590e-21086.1730S ribosomal protein S1 n=1 Tax=Algimonas arctica... [more]
UPI000420A54C1.390e-20987.3230S ribosomal protein S1 n=1 Tax=Hellea balneolens... [more]
A0A420WDK7_9PROT1.270e-20785.3030S ribosomal protein S1 n=1 Tax=Litorimonas taean... [more]
A0A848V0V8_9PROT2.590e-19980.9230S ribosomal protein S1 n=1 Tax=Hellea sp. TaxID=... [more]
A0A7Y1SMK4_9PROT6.540e-19481.8430S ribosomal protein S1 n=2 Tax=Bacteria TaxID=2 ... [more]
UPI000476AA293.440e-19078.9630S ribosomal protein S1 n=1 Tax=Robiginitomaculum... [more]
A0A2G2GI52_9PROT2.620e-18979.7730S ribosomal protein S1 n=2 Tax=Robiginitomaculum... [more]
A0A2G1YVL3_9PROT3.020e-18577.0830S ribosomal protein S1 n=2 Tax=Robiginitomaculum... [more]
A0A2G2MU33_9PROT1.570e-18477.5230S ribosomal protein S1 n=1 Tax=Robiginitomaculum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig99683contigP-canaliculata_contig99683:3..1040 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score582.4
Seed ortholog evalue1.4e-163
Seed eggNOG ortholog1121948.AUAC01000007_gene404
Preferred namerpsA
KEGG rclassRC01137,RC01487
KEGG koko:K02945,ko:K03527
KEGG ReactionR05884,R08210
KEGG Pathwayko00900,ko01100,ko01110,ko01130,ko03010,map00900,map01100,map01110,map01130,map03010
KEGG ModuleM00096,M00178
EggNOG free text desc.Ribosomal protein S1
EggNOG OGs1MVAV@1224,2TQPV@28211,43W6M@69657,COG0539@1,COG0539@2
EC1.17.7.4
COG Functional cat.J
Best tax levelHyphomonadaceae
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011
Hectar predicted targeting categoryother localisation
Exons1
Model size1038
Cds size1017
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817356.2251763-UTR-P-canaliculata_contig99683:2..231622817356.2251763-UTR-P-canaliculata_contig99683:2..23Pelvetia canaliculata dioeciousUTRP-canaliculata_contig99683 3..23 +
1693495244.115961-UTR-P-canaliculata_contig99683:2..231693495244.115961-UTR-P-canaliculata_contig99683:2..23Pelvetia canaliculata dioeciousUTRP-canaliculata_contig99683 3..23 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817356.240095-CDS-P-canaliculata_contig99683:23..10401622817356.240095-CDS-P-canaliculata_contig99683:23..1040Pelvetia canaliculata dioeciousCDSP-canaliculata_contig99683 24..1040 +
1693495244.1309636-CDS-P-canaliculata_contig99683:23..10401693495244.1309636-CDS-P-canaliculata_contig99683:23..1040Pelvetia canaliculata dioeciousCDSP-canaliculata_contig99683 24..1040 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig99683.24084.1prot_P-canaliculata_contig99683.24084.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig99683 24..1040 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig99683.24084.1

>prot_P-canaliculata_contig99683.24084.1 ID=prot_P-canaliculata_contig99683.24084.1|Name=mRNA_P-canaliculata_contig99683.24084.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=339bp
MGQTQPFMILKMDRSRGNIVVSRRAILEESRAEQRAELVAELKEGETRDG
VVKNITDYGAFVDLGGIDGLLHVTDMSWRRVSHPSQVLNVGDTVQVKIIR
INPETQRISLGMKQLQEDPWNAAAAKYTPGTRHTGTVTNIADYGAFIELE
EGVEGLVHVSEMSWTKKNIHPGKIVSTSQQIEVEVLDVDQEKRRISLGIK
QVQANPWDDFSDRFPLGSVVTGEVRSITEFGLFIGLDGEIDGMAHLSDLS
WDKSGEEALKDYAKGDTVEAKILEVDTEKERISLGIKQLTKDSAPAGAAG
ANRGATVTCTVVNVQPAGLDVTFGEENDVKAFIRKGDLS
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mRNA from alignment at P-canaliculata_contig99683:3..1040+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig99683.24084.1 ID=mRNA_P-canaliculata_contig99683.24084.1|Name=mRNA_P-canaliculata_contig99683.24084.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1038bp|location=Sequence derived from alignment at P-canaliculata_contig99683:3..1040+ (Pelvetia canaliculata dioecious)
GTTCGCGACATTGGCCCGTTGATGGGTCAAACCCAGCCCTTTATGATTTT GAAGATGGACCGCTCACGCGGAAACATCGTGGTGTCCCGCCGCGCCATCC TTGAAGAGTCCCGTGCAGAACAGCGCGCAGAGCTGGTTGCGGAGCTTAAA GAAGGCGAAACACGCGACGGCGTTGTCAAGAACATCACCGATTACGGTGC GTTCGTCGACCTCGGCGGTATAGATGGTCTCTTGCATGTCACTGACATGT CTTGGCGCCGCGTCAGCCACCCGAGCCAAGTCCTCAATGTGGGCGACACC GTTCAGGTGAAAATCATCCGCATTAATCCTGAGACGCAGCGCATCAGCCT CGGTATGAAGCAGCTTCAGGAAGATCCGTGGAATGCAGCCGCAGCGAAAT ACACACCGGGCACACGCCATACAGGTACAGTCACGAATATCGCCGATTAC GGTGCATTCATCGAGCTGGAAGAAGGCGTCGAAGGTTTGGTCCATGTGTC CGAAATGTCCTGGACAAAGAAGAACATCCATCCGGGCAAGATTGTCTCGA CCTCTCAGCAAATCGAAGTCGAAGTTCTCGACGTCGATCAAGAGAAGCGC CGCATCTCTCTCGGCATCAAGCAGGTTCAAGCGAACCCTTGGGACGATTT CTCAGACCGCTTCCCGCTCGGATCCGTTGTCACCGGCGAAGTCCGCTCTA TTACAGAGTTCGGATTGTTCATCGGTCTGGACGGCGAAATCGACGGCATG GCCCATCTGTCCGACCTGTCTTGGGACAAGTCCGGCGAAGAGGCGCTGAA AGATTATGCCAAAGGCGATACGGTTGAGGCTAAAATCCTCGAAGTTGATA CAGAGAAAGAGCGCATCTCGCTCGGCATCAAACAGCTTACCAAAGACTCC GCCCCGGCAGGCGCGGCCGGTGCAAACCGCGGCGCGACCGTCACCTGTAC GGTCGTCAATGTGCAGCCAGCCGGTCTGGACGTTACATTTGGCGAAGAGA ACGATGTCAAAGCGTTCATTCGCAAAGGCGATCTGTCC
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Coding sequence (CDS) from alignment at P-canaliculata_contig99683:3..1040+

>mRNA_P-canaliculata_contig99683.24084.1 ID=mRNA_P-canaliculata_contig99683.24084.1|Name=mRNA_P-canaliculata_contig99683.24084.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2034bp|location=Sequence derived from alignment at P-canaliculata_contig99683:3..1040+ (Pelvetia canaliculata dioecious)
ATGGGTCAAACCCAGCCCTTTATGATTTTGAAGATGGACCGCTCACGCGG
AAACATCGTGGTGTCCCGCCGCGCCATCCTTGAAGAGTCCCGTGCAGAAC
AGCGCGCAGAGCTGGTTGCGGAGCTTAAAGAAGGCGAAACACGCGACGGC
GTTGTCAAGAACATCACCGATTACGGTGCGTTCGTCGACCTCGGCGGTAT
AGATGGTCTCTTGCATGTCACTGACATGTCTTGGCGCCGCGTCAGCCACC
CGAGCCAAGTCCTCAATGTGGGCGACACCGTTCAGGTGAAAATCATCCGC
ATTAATCCTGAGACGCAGCGCATCAGCCTCGGTATGAAGCAGCTTCAGGA
AGATCCGTGGAATGCAGCCGCAGCGAAATACACACCGGGCACACGCCATA
CAGGTACAGTCACGAATATCGCCGATTACGGTGCATTCATCGAGCTGGAA
GAAGGCGTCGAAGGTTTGGTCCATGTGTCCGAAATGTCCTGGACAAAGAA
GAACATCCATCCGGGCAAGATTGTCTCGACCTCTCAGCAAATCGAAGTCG
AAGTTCTCGACGTCGATCAAGAGAAGCGCCGCATCTCTCTCGGCATCAAG
CAGGTTCAAGCGAACCCTTGGGACGATTTCTCAGACCGCTTCCCGCTCGG
ATCCGTTGTCACCGGCGAAGTCCGCTCTATTACAGAGTTCGGATTGTTCA
TCGGTCTGGACGGCGAAATCGACGGCATGGCCCATCTGTCCGACCTGTCT
TGGGACAAGTCCGGCGAAGAGGCGCTGAAAGATTATGCCAAAGGCGATAC
GGTTGAGGCTAAAATCCTCGAAGTTGATACAGAGAAAGAGCGCATCTCGC
TCGGCATCAAACAGCTTACCAAAGACTCCGCCCCGGCAGGCGCGGCCGGT
GCAAACCGCGGCGCGACCGTCACCTGTACGGTCGTCAATGTGCAGCCAGC
CGGTCTGGACGTTACATTTGGCGAAGAGAACGATGTCAAAGCGTTCATTC
GCAAAGGCGATCTGTCCATGGGTCAAACCCAGCCCTTTATGATTTTGAAG
ATGGACCGCTCACGCGGAAACATCGTGGTGTCCCGCCGCGCCATCCTTGA
AGAGTCCCGTGCAGAACAGCGCGCAGAGCTGGTTGCGGAGCTTAAAGAAG
GCGAAACACGCGACGGCGTTGTCAAGAACATCACCGATTACGGTGCGTTC
GTCGACCTCGGCGGTATAGATGGTCTCTTGCATGTCACTGACATGTCTTG
GCGCCGCGTCAGCCACCCGAGCCAAGTCCTCAATGTGGGCGACACCGTTC
AGGTGAAAATCATCCGCATTAATCCTGAGACGCAGCGCATCAGCCTCGGT
ATGAAGCAGCTTCAGGAAGATCCGTGGAATGCAGCCGCAGCGAAATACAC
ACCGGGCACACGCCATACAGGTACAGTCACGAATATCGCCGATTACGGTG
CATTCATCGAGCTGGAAGAAGGCGTCGAAGGTTTGGTCCATGTGTCCGAA
ATGTCCTGGACAAAGAAGAACATCCATCCGGGCAAGATTGTCTCGACCTC
TCAGCAAATCGAAGTCGAAGTTCTCGACGTCGATCAAGAGAAGCGCCGCA
TCTCTCTCGGCATCAAGCAGGTTCAAGCGAACCCTTGGGACGATTTCTCA
GACCGCTTCCCGCTCGGATCCGTTGTCACCGGCGAAGTCCGCTCTATTAC
AGAGTTCGGATTGTTCATCGGTCTGGACGGCGAAATCGACGGCATGGCCC
ATCTGTCCGACCTGTCTTGGGACAAGTCCGGCGAAGAGGCGCTGAAAGAT
TATGCCAAAGGCGATACGGTTGAGGCTAAAATCCTCGAAGTTGATACAGA
GAAAGAGCGCATCTCGCTCGGCATCAAACAGCTTACCAAAGACTCCGCCC
CGGCAGGCGCGGCCGGTGCAAACCGCGGCGCGACCGTCACCTGTACGGTC
GTCAATGTGCAGCCAGCCGGTCTGGACGTTACATTTGGCGAAGAGAACGA
TGTCAAAGCGTTCATTCGCAAAGGCGATCTGTCC
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