Homology
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Match:
A0A518GAF9_9BACT (Phosphocholine transferase AnkX n=1 Tax=Aureliella helgolandensis TaxID=2527968 RepID=A0A518GAF9_9BACT)
HSP 1 Score: 76.6 bits (187), Expect = 3.930e-13
Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 10 GCTLVFAAVLILTSTRATAQTQTSESMPRLADLAESQHWDWLDKPLSDDAIQQA-QPDGTSVLHWAVFHRNQAAIEKLIAAGIDVNQTNRYQVSPLSLACELG 315
G LV+ ++ ++ ++ +S S L DLAE Q W + L+ A QPDGT+ LHWAVFH + AI+ L+A DVN YQV+PLSLACE G
Sbjct: 12 GYLLVWCSIRPASAPAFQQESGSSVSPATLPDLAEHQRWTDVASQLAQGEPPTATQPDGTTALHWAVFHNHPEAIQLLLATSADVNAETHYQVTPLSLACEFG 114
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Match:
UPI001E3405EA (ankyrin repeat domain-containing protein n=2 Tax=Roseiconus lacunae TaxID=2605694 RepID=UPI001E3405EA)
HSP 1 Score: 75.9 bits (185), Expect = 7.410e-13
Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 91 PRLADLAESQHWDWLDKPL---SDDAIQQAQPDGTSVLHWAVFHRNQAAIEKLIAAGIDVNQTNRYQVSPLSLACELG 315
P LADLAE W L L +D +QQ PDGT+ LHWAV+H++Q +I+ LI AG++V+ N+Y V+PL++AC G
Sbjct: 45 PSLADLAERSEWVNLKLKLRSGADPNVQQ--PDGTTALHWAVYHQDQPSIDALIEAGVEVDVPNKYDVTPLAIACRYG 120
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Match:
A0A848WVR8_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A848WVR8_9BACT)
HSP 1 Score: 69.3 bits (168), Expect = 1.360e-10
Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 97 LADLAESQHWDWLDKPLSDDAIQQA-QPDGTSVLHWAVFHRNQAAIEKLIAAGIDVNQTNRYQVSPLSLACELGH 318
L+DLAE+Q+W ++K L++ A A QPDGT+ LHWA +H + ++ L+ AG + NR+ +PLSLAC G+
Sbjct: 24 LSDLAEAQNWRAVEKALTEKADPNAAQPDGTTALHWAAYHDREQVVKTLLEAGGKPDARNRFDATPLSLACTNGN 98
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Match:
UPI001E56697A (ankyrin repeat domain-containing protein n=2 Tax=unclassified Rhodopirellula TaxID=2624920 RepID=UPI001E56697A)
HSP 1 Score: 54.7 bits (130), Expect = 1.510e-5
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 166 QAQPDGTSVLHWAVFHRNQAAIEKLIAAGIDVNQTNRYQVSPLSLACELGHEPAA 330
Q+QPDG + + WA +H IE+L AAG D++ + +Y VSPLSLA E G+ +A
Sbjct: 72 QSQPDGMTAVLWAAYHDQPQWIERLHAAGADLDVSTQYLVSPLSLASEFGNMESA 126
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Match:
A0A2V8FBE4_9BACT (Uncharacterized protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8FBE4_9BACT)
HSP 1 Score: 53.9 bits (128), Expect = 2.820e-5
Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = 1
Query: 160 IQQAQPDGTSVLHWAVFHRNQAAIEKLIAAGIDVNQTNRYQVSPLSLAC 306
+ DGTS LHWAV + A++ L+ AG + TNRY V+PLSLAC
Sbjct: 118 VNDTDVDGTSALHWAVHRDDVNAVDLLLGAGAKASATNRYGVTPLSLAC 166
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99302.24045.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 5
0 1 Expect = 3.93e-13 / Id = 42.72 Expect = 7.41e-13 / Id = 48.72 Expect = 1.36e-10 / Id = 44.00 Expect = 1.51e-5 / Id = 47.27 Expect = 2.82e-5 / Id = 48.98 Sequence A0A518GAF9_9BACT UPI001E3405EA A0A848WVR8_9BACT UPI001E56697A A0A2V8FBE4_9BACT back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99302.24045.1
>prot_P-canaliculata_contig99302.24045.1 ID=prot_P-canaliculata_contig99302.24045.1|Name=mRNA_P-canaliculata_contig99302.24045.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=177bp
MRFGCTLVFAAVLILTSTRATAQTQTSESMPRLADLAESQHWDWLDKPLS back to top mRNA from alignment at P-canaliculata_contig99302:4..534-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig99302.24045.1 ID=mRNA_P-canaliculata_contig99302.24045.1|Name=mRNA_P-canaliculata_contig99302.24045.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=531bp|location=Sequence derived from alignment at P-canaliculata_contig99302:4..534- (Pelvetia canaliculata dioecious)ATGCGATTTGGTTGTACCTTGGTTTTCGCGGCAGTACTGATACTGACCTC
TACTCGAGCCACCGCACAGACTCAAACCTCTGAATCGATGCCTCGCCTCG
CCGATCTGGCCGAATCTCAACACTGGGATTGGCTGGACAAACCGCTGTCC
GACGATGCGATCCAGCAAGCCCAACCCGATGGCACTAGCGTTTTGCATTG
GGCCGTGTTTCATCGAAACCAAGCGGCGATCGAAAAACTGATCGCTGCTG
GCATCGACGTGAACCAAACCAACCGCTACCAAGTCAGCCCGCTTAGTCTC
GCCTGCGAGCTGGGCCATGAGCCAGCAGCACTGAGTTTGATCAAAGCCAA
AGCGGATGTGCAATCGCAACGACTCGGCCGCGAGACGCCACTAATGTTCG
CCGCGCGAAATGGTAACGCGGAAATCGTCAGTGCTCTGATCGAGGCCGGT
GCAAATGTCGATGCCCAAGAAGTCAATGGACAAACGGCGTTGATCTGGGC
TGCGGCAGAAGGCAGTTCAAAGTGTATTGAT back to top Coding sequence (CDS) from alignment at P-canaliculata_contig99302:4..534-
>mRNA_P-canaliculata_contig99302.24045.1 ID=mRNA_P-canaliculata_contig99302.24045.1|Name=mRNA_P-canaliculata_contig99302.24045.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1062bp|location=Sequence derived from alignment at P-canaliculata_contig99302:4..534- (Pelvetia canaliculata dioecious) back to top