mRNA_P-canaliculata_contig99183.24034.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig99183.24034.1 vs. uniprot
Match: A0A5C6B0A3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly21 TaxID=2528014 RepID=A0A5C6B0A3_9BACT) HSP 1 Score: 90.9 bits (224), Expect = 1.900e-19 Identity = 56/173 (32.37%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 70 SGIDYTEDSPTSGRVTAGMFVLGMPILLGFGFLVSTCIAYIARRMGAWVAWPLTAMVFAMLIYLSAVSSSPWNRLADVLNVDLQ-NVRICRLKQMDSFGDGITTLALIDGDDELFDRICLANGLRKTSDLTPSFFNWLYEDKTPFLEPVTVFENDRLTCYNDAANNRLFIYHR 585
S +D++ GR TAG FVLG+P+L+ L + + +ARR +AW ++F L++ + S+P RL L+V++ +V+I RL++ DSF DGITT+ D E + + + L + D+T + + D ++ V + NDRLTCY+D+ L+ R
Sbjct: 2 SSMDFSTALAGDGRKTAGWFVLGLPMLVPIAMLSTMPFSMVARRGRRAIAWLAMCVLFGALMWFAYSQSTPLARLEWALDVEIPTDVKIIRLRETDSFNDGITTVGACIADREFINDLVAHHSL--SEDITGGYISPYLPDANISVDGVG-YRNDRLTCYHDSKTKTLYFVRR 171 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99183.24034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig99183.24034.1 >prot_P-canaliculata_contig99183.24034.1 ID=prot_P-canaliculata_contig99183.24034.1|Name=mRNA_P-canaliculata_contig99183.24034.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=204bp LLRPFSLFATSMICFLVWAWFSTSGIDYTEDSPTSGRVTAGMFVLGMPILback to top mRNA from alignment at P-canaliculata_contig99183:328..939- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig99183.24034.1 ID=mRNA_P-canaliculata_contig99183.24034.1|Name=mRNA_P-canaliculata_contig99183.24034.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=612bp|location=Sequence derived from alignment at P-canaliculata_contig99183:328..939- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig99183:328..939- >mRNA_P-canaliculata_contig99183.24034.1 ID=mRNA_P-canaliculata_contig99183.24034.1|Name=mRNA_P-canaliculata_contig99183.24034.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1224bp|location=Sequence derived from alignment at P-canaliculata_contig99183:328..939- (Pelvetia canaliculata dioecious)back to top |