mRNA_P-canaliculata_contig98812.23999.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig98812.23999.1 vs. uniprot
Match: A0A5C6BX72_9BACT (Tetratricopeptide repeat protein n=1 Tax=Planctomycetes bacterium Poly21 TaxID=2528014 RepID=A0A5C6BX72_9BACT) HSP 1 Score: 186 bits (471), Expect = 3.080e-52 Identity = 106/264 (40.15%), Postives = 153/264 (57.95%), Query Frame = 1 Query: 1 ALQYVDGWIETAADDPLPFLRKGELLMSAQRLSEAESYLTMSIQMDSNPHEAEKSLALLYEKTGNKIEALKILERETKANPTNVDLQLLMCNVLFGLNRDADAAAVLREVLRTHPLHFTATHALASSLAERGQPAEVIELVKPLLHEFPHDVSLSYLMAWANLELGDATESDRWMQIHLDARRALNRLFVELKKSTTGSQSRPDYLGIANEYFQYQWDKAEPALARAISNSPRSADAYRAMAKFSEMKGDPGKAADFNKAAESL 792
AL +V+ WIE A+++P K ELL +A + AE +I+ D A LA L + G EA++ + E P N+ L+LL C+ L + R +A LR+VL L+F A H+LAS LA+RG+ A+VIE++ PL++ F D SL+YL+A A E GDA +D+ MQ HLD R+ L+ L + K + G + L IA +Y +YQWD AEP + RAI NSP + DA+ MA F KGD +A+ + +AA +
Sbjct: 197 ALHHVNEWIEAASENPRAIAYKAELLATAGDMDAAEKLFRTAIRQDPALRRARHGLAKLMKYVGKYQEAVEQFDIEIANEPDNITLRLLRCDALLQMQRSDEAIEGLRDVLELDELNFPARHSLASQLAKRGEHAQVIEVLTPLMNRFADDASLNYLLASAYSEQGDAERADQHMQKHLDGRKRLDELAMITKSLSDGEPDQDALLMIARDYMKYQWDVAEPWIVRAIQNSPDTPDAFLVMADFQRKKGDLEQASQYVQAARQV 460 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98812.23999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig98812.23999.1 >prot_P-canaliculata_contig98812.23999.1 ID=prot_P-canaliculata_contig98812.23999.1|Name=mRNA_P-canaliculata_contig98812.23999.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=268bp ALQYVDGWIETAADDPLPFLRKGELLMSAQRLSEAESYLTMSIQMDSNPHback to top mRNA from alignment at P-canaliculata_contig98812:5..808+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig98812.23999.1 ID=mRNA_P-canaliculata_contig98812.23999.1|Name=mRNA_P-canaliculata_contig98812.23999.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=804bp|location=Sequence derived from alignment at P-canaliculata_contig98812:5..808+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig98812:5..808+ >mRNA_P-canaliculata_contig98812.23999.1 ID=mRNA_P-canaliculata_contig98812.23999.1|Name=mRNA_P-canaliculata_contig98812.23999.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1608bp|location=Sequence derived from alignment at P-canaliculata_contig98812:5..808+ (Pelvetia canaliculata dioecious)back to top |