mRNA_P-canaliculata_contig9853.23964.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_P-canaliculata_contig9853.23964.1 vs. uniprot
Match: D8LI40_ECTSI (A to I editase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI40_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 2.340e-18
Identity = 118/401 (29.43%), Postives = 167/401 (41.65%), Query Frame = 3

Query:  303 QVLARRALMLRFWKELFLVMSQS---KRNPSSDAVEGS---FRAGSEAITALPAQEYRGVEAE----PLLYAGV-PLDDDRMLLLLE--PTAKGA-----WRVKSTLRLHLYVSDPPCGDASIYQQPVESPPHHGLRSSPFESDHIHGGGASTCCGEGGAERETRETSAFSCSEMKCVANQPSLAEFFHSSTSSISNKFEMEKNREMGECNNPGEGCHEKNGECCCDXXXGGDGGNDREINFKPTPRGDERKSCDRTKKGHRCNVPDATGPSVLNLSSSYQCRCPYPTVEKSRDRGDGRSSLGERDRADKMTFTGAKIIAAVKERDATDREFGAVNRLGGMEGDLTLRIDREQEQLLGALRIKSSRSNISEEGRTISMSCSDKLSKWAVLGVQ----VSWL 1439
            +VLARRAL+LR W+EL L +S +   +++ + D  +G      +G     + P+        +    P LY GV P +DD  +LLLE  P A  A     WR+K  +RLHLY+SD PCGDASIY+Q  ++P             ++ GGG++ C   GG + +    S++         + P                  +  +R  GE    G+                               RGD +++        RC V      ++  LS +     P P +    +R    +SL   D                K R+                          +EQ +GALRIKSSRSNISEEGRT+SMSCSDKL+KWA LGVQ     SW+
Sbjct:   89 EVLARRALLLRLWRELHLRVSSAAGRQQDVTIDERKGGGTPCNSGRSDGRSTPSSSTTAATVDAHPQPPLYGGVLPGEDDGRILLLERSPQATDAGACISWRLKPYIRLHLYISDAPCGDASIYEQKRQAP-------------NVGGGGSARC---GGGDGDPGNDSSWD----DAPRSTP------------------LAGSRSDGERRGRGD-----------------------------ADRGDAKRA--------RCAV------AIAGLSDAV-APSPRPDLPLDEERSCSAASLNPLD---------------CKPREP-------------------------EEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWAFLGVQGGLLASWV 367

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BLAST of mRNA_P-canaliculata_contig9853.23964.1 vs. uniprot
Match: A0A7S3LDF6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDF6_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 7.450e-8
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 3

Query: 1179 MTFTGAKIIAAVKERDATDREFGAVNRLGGMEGDLTL--RIDREQEQLLGALRIKSSRSNISEEGRTISMSCSDKLSKWAVLGVQ 1427
            + FTGAK+I + +E   + ++ G     GG E  L    R+ RE+ QLLG LR KS RSN+    R+ S+SCSDK+ +W VLG+Q
Sbjct:   29 LQFTGAKVIVS-QETKVSVQDCG-----GGSEASLLQDSRVARERVQLLGRLRTKSGRSNLQAHQRSDSLSCSDKIVRWCVLGLQ 107

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BLAST of mRNA_P-canaliculata_contig9853.23964.1 vs. uniprot
Match: K0R2A8_THAOC (A to I editase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R2A8_THAOC)

HSP 1 Score: 63.2 bits (152), Expect = 7.870e-7
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 3

Query: 1179 MTFTGAKIIAAVKERDATDREFGAVNRLGGMEGDLTLRIDREQEQLLGALRIKSSRSNISEEGRTISMSCSDKLSKWAVLGVQ 1427
            + FTGAKII +  E   T             EG++ +R+ REQ Q++  LR+KSSRSNI  + R++S+ C+DK+ +W+V G+Q
Sbjct:  194 VNFTGAKIILSGGEEHQTTNITSLQEE---PEGEVKVRLGREQVQIVKKLRVKSSRSNIPNKMRSMSLCCADKIVRWSVFGLQ 273

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BLAST of mRNA_P-canaliculata_contig9853.23964.1 vs. uniprot
Match: A0A835ZEK1_9STRA (A to I editase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.050e-5
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 3

Query: 1275 GDLTLRIDREQEQLLGALRIKSSRSNISEEGRTISMSCSDKLSKWAVLGVQVSWL*ASIDRRPRLL*NIRNRVTLRALEDVK 1520
            G   L ++RE  Q +G LR+KS RS++  E RT SMSCSDKL++WAVLG+Q   L   ++  P LL ++      RA  D +
Sbjct:  274 GAKALTLEREVRQAVGQLRLKSGRSDLRPEDRTESMSCSDKLARWAVLGLQGRLLRRWLE--PVLLSSVTVSADARAAPDAQ 353

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BLAST of mRNA_P-canaliculata_contig9853.23964.1 vs. uniprot
Match: B7FPV9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPV9_PHATC)

HSP 1 Score: 56.6 bits (135), Expect = 6.250e-5
Identity = 34/86 (39.53%), Postives = 49/86 (56.98%), Query Frame = 3

Query: 1179 MTFTGAKIIAAVKERDATDREFGAVNRLGGMEGDLTLR---IDREQEQLLGALRIKSSRSNISEEGRTISMSCSDKLSKWAVLGVQ 1427
            + +TGAK+I + +    T ++ G  ++L             + RE  QLLG LR K+ RSNI    R+ SMSCSDK+ +W VLG+Q
Sbjct:  170 LQYTGAKVIVS-EHTKVTGKDCGGDHQLLLKSSSAIFSSSYVAREDVQLLGKLRTKAGRSNIEAARRSTSMSCSDKIVRWMVLGLQ 254

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BLAST of mRNA_P-canaliculata_contig9853.23964.1 vs. uniprot
Match: A0A1Z5KAH5_FISSO (tRNA-specific adenosine deaminase 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAH5_FISSO)

HSP 1 Score: 57.0 bits (136), Expect = 6.740e-5
Identity = 37/109 (33.94%), Postives = 57/109 (52.29%), Query Frame = 3

Query: 1104 YPT-VEKSRDRGDGRSSLGERDRADKMTFTGAKIIAAVKERDATDREFGAVNRLGGMEGDLTLRIDREQEQLLGALRIKSSRSNISEEGRTISMSCSDKLSKWAVLGVQ 1427
            YP  V   + + D +S+      ++ + FTGAK+I +  +        G + +    +  L   +   Q Q +G LR KS RSN+    R+ SMSCSDKL +W+VLG+Q
Sbjct:  147 YPVRVNDDKSKSDNKSTNNTHPPSE-LLFTGAKVIVSSSDATEVAETGGPLLQSHNSQQHL---VREPQAQSVGQLRSKSGRSNLESSRRSFSMSCSDKLVRWSVLGLQ 251

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BLAST of mRNA_P-canaliculata_contig9853.23964.1 vs. uniprot
Match: A0A7S2U6Z4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U6Z4_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 6.770e-5
Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 3

Query: 1203 IAAVKERDATDREFGAVNRLGGMEGDLTLRIDRE-QEQLLGALRIKSSRSNISEEGRTISMSCSDKLSKWAVLGVQVSWL*ASIDRRPRL 1469
            +A + +  A+ R+     + GG  G     + RE  EQ+LGALR KS RSN+    R+ SMSCSDKL +W +LG+Q S L   I    RL
Sbjct:  311 LAVLPQTSASTRDGDMDGKGGGCAG-----VAREPNEQILGALRTKSGRSNLPAHLRSTSMSCSDKLVRWGILGLQGSLLSRYIPHAIRL 395

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BLAST of mRNA_P-canaliculata_contig9853.23964.1 vs. uniprot
Match: A0A7S3PX48_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX48_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 9.940e-5
Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 3

Query: 1179 MTFTGAKIIA---AVKERDATDRE----FGAVNRLGGMEGDLTLRIDREQEQLLGALRIKSSRSNISEEGRTISMSCSDKLSKWAVLGVQVSWL*ASIDRRP 1463
            + FTGAKII      K+R A +       G V     ++      I RE+ Q+  ALR+KS RSN+    R  SMSCSDKL KW++LG+Q S   + + + P
Sbjct:  215 VNFTGAKIIVPSECSKKRKAFESSNLTFCGNVKSSKEVDKREMSFIARERLQITSALRLKSGRSNLPAHMRCSSMSCSDKLCKWSILGLQGSGFLSCLLKNP 316

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig9853.23964.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig9853.23964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8

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POSITION

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Match Name	E-value	Identity	Description
D8LI40_ECTSI	2.340e-18	29.43	A to I editase domain-containing protein n=2 Tax=E...	[more]
A0A7S3LDF6_9STRA	7.450e-8	44.71	Hypothetical protein (Fragment) n=1 Tax=Amphora co...	[more]
K0R2A8_THAOC	7.870e-7	40.96	A to I editase domain-containing protein n=1 Tax=T...	[more]
A0A835ZEK1_9STRA	2.050e-5	43.90	A to I editase domain-containing protein n=1 Tax=T...	[more]
B7FPV9_PHATC	6.250e-5	39.53	Predicted protein n=2 Tax=Phaeodactylum tricornutu...	[more]
A0A1Z5KAH5_FISSO	6.740e-5	33.94	tRNA-specific adenosine deaminase 1 n=1 Tax=Fistul...	[more]
A0A7S2U6Z4_9STRA	6.770e-5	42.22	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A7S3PX48_9STRA	9.940e-5	39.22	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]