Homology
BLAST of mRNA_P-canaliculata_contig9851.23961.1 vs. uniprot
Match:
A0A6H5L4K2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4K2_9PHAE)
HSP 1 Score: 66.6 bits (161), Expect = 6.450e-11
Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 52 QWPENMPLGVQPTMQELTDAIRSLANGKGVGPDGVSVDT----LNGDPALRRRMLDIVFRIWRGGEAPKQWKD 258
+WP +PL V P++ E+ +A+R +AN K VGPD + + L+GD L R IV +W+ G+ P+QWKD
Sbjct: 402 RWPTCVPLDVIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKD 474
BLAST of mRNA_P-canaliculata_contig9851.23961.1 vs. uniprot
Match:
A0A6H5JQE0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQE0_9PHAE)
HSP 1 Score: 64.7 bits (156), Expect = 6.790e-11
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 52 QWPENMPLGVQPTMQELTDAIRSLANGKGVGPDGVSVDT----LNGDPALRRRMLDIVFRIWRGGEAPKQWKD 258
+WP +PL P++ E+ +A+R +AN K VGPD + + L+GD L R IV +W+ G+ P+QWKD
Sbjct: 60 RWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHSIVVDVWQTGDVPQQWKD 132
BLAST of mRNA_P-canaliculata_contig9851.23961.1 vs. uniprot
Match:
A0A6H5L012_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L012_9PHAE)
HSP 1 Score: 65.1 bits (157), Expect = 8.560e-11
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 52 QWPENMPLGVQPTMQELTDAIRSLANGKGVGPDGVSVDT----LNGDPALRRRMLDIVFRIWRGGEAPKQWKD 258
+WP +PL P+++E+ +A+R +AN K VGPD + + L+GD L R IV +W+ G+ P+QWKD
Sbjct: 125 RWPTCVPLDDIPSLREVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKD 197
BLAST of mRNA_P-canaliculata_contig9851.23961.1 vs. uniprot
Match:
A0A6H5K8I2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I2_9PHAE)
HSP 1 Score: 63.9 bits (154), Expect = 1.080e-10
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 52 QWPENMPLGVQPTMQELTDAIRSLANGKGVGPDGVSVDT----LNGDPALRRRMLDIVFRIWRGGEAPKQWKD 258
+WP +PL P++ E+ +A+R +AN K VGPD + + L+GD L R IV +W+ G+ P+QWKD
Sbjct: 91 RWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKD 163
BLAST of mRNA_P-canaliculata_contig9851.23961.1 vs. uniprot
Match:
A0A6H5JZD4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZD4_9PHAE)
HSP 1 Score: 65.9 bits (159), Expect = 1.220e-10
Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 52 QWPENMPLGVQPTMQELTDAIRSLANGKGVGPDGVSVDT----LNGDPALRRRMLDIVFRIWRGGEAPKQWKD 258
QWP +PL P++ E+ +A+R +AN K VGPD + + L+GD L R IV +W+ G+ P+QWKD
Sbjct: 58 QWPTYVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKD 130
BLAST of mRNA_P-canaliculata_contig9851.23961.1 vs. uniprot
Match:
A0A6H5L9V0_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9V0_9PHAE)
HSP 1 Score: 63.5 bits (153), Expect = 2.190e-10
Identity = 29/73 (39.73%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 52 QWPENMPLGVQPTMQELTDAIRSLANGKGVGPDGVSVDT----LNGDPALRRRMLDIVFRIWRGGEAPKQWKD 258
+WP +PL P++ E+ +A+R +AN K VGPD + + L+GD L R IV +W G+ P+QWKD
Sbjct: 58 RWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWLAGDVPQQWKD 130
BLAST of mRNA_P-canaliculata_contig9851.23961.1 vs. uniprot
Match:
A0A6H5JP02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP02_9PHAE)
HSP 1 Score: 65.1 bits (157), Expect = 2.290e-10
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 52 QWPENMPLGVQPTMQELTDAIRSLANGKGVGPDGVSVDT----LNGDPALRRRMLDIVFRIWRGGEAPKQWKD 258
+WP +PL P++ E+ +A+R++AN K VGPD + + L+GD L R IV +W+ G+ P+QWKD
Sbjct: 309 RWPTCVPLDDIPSLLEIEEAVRAMANRKAVGPDDLQAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKD 381
BLAST of mRNA_P-canaliculata_contig9851.23961.1 vs. uniprot
Match:
A0A6H5K0F8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0F8_9PHAE)
HSP 1 Score: 63.9 bits (154), Expect = 2.410e-10
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 52 QWPENMPLGVQPTMQELTDAIRSLANGKGVGPDGVSVDT----LNGDPALRRRMLDIVFRIWRGGEAPKQWKD 258
+WP +PL P++ E+ +A+R +AN K VGPD + + L+GD L R IV +W+ G+ P+QWKD
Sbjct: 115 RWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKD 187
BLAST of mRNA_P-canaliculata_contig9851.23961.1 vs. uniprot
Match:
A0A6H5JY74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY74_9PHAE)
HSP 1 Score: 64.7 bits (156), Expect = 3.050e-10
Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 52 QWPENMPLGVQPTMQELTDAIRSLANGKGVGPDGVSVDT----LNGDPALRRRMLDIVFRIWRGGEAPKQWKD 258
QWP +PL P++ E+ +A+R +AN K VGPD + + L+GD L R IV +W+ G+ P+QWKD
Sbjct: 356 QWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGLLREFHAIVVDVWQTGDVPQQWKD 428
BLAST of mRNA_P-canaliculata_contig9851.23961.1 vs. uniprot
Match:
A0A6H5JV82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV82_9PHAE)
HSP 1 Score: 63.9 bits (154), Expect = 3.430e-10
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 52 QWPENMPLGVQPTMQELTDAIRSLANGKGVGPDGVSVDT----LNGDPALRRRMLDIVFRIWRGGEAPKQWKD 258
+WP +PL P++ E+ +A+R +AN K VGPD + + L+GD L R IV +W+ G+ P+QWKD
Sbjct: 55 RWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKD 127
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9851.23961.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Pages
back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9851.23961.1
>prot_P-canaliculata_contig9851.23961.1 ID=prot_P-canaliculata_contig9851.23961.1|Name=mRNA_P-canaliculata_contig9851.23961.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=86bp
MGPVVSNSLTPSHRGFDQWPENMPLGVQPTMQELTDAIRSLANGKGVGPD
GVSVDTLNGDPALRRRMLDIVFRIWRGGEAPKQWKD
back to topmRNA from alignment at P-canaliculata_contig9851:6..263-
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9851.23961.1 ID=mRNA_P-canaliculata_contig9851.23961.1|Name=mRNA_P-canaliculata_contig9851.23961.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=258bp|location=Sequence derived from alignment at P-canaliculata_contig9851:6..263- (Pelvetia canaliculata dioecious)
ATGGGTCCGGTGGTCTCAAACTCTCTTACGCCAAGTCACCGAGGCTTTGA
CCAGTGGCCCGAGAATATGCCGCTAGGAGTTCAGCCCACGATGCAGGAGC
TGACAGACGCCATCCGCTCGTTGGCAAACGGAAAGGGCGTTGGACCGGAC
GGAGTCTCCGTCGACACTCTCAATGGTGATCCCGCCCTACGCCGGAGAAT
GCTCGATATCGTATTTCGTATTTGGAGGGGGGGCGAGGCGCCGAAGCAGT
GGAAAGAT
back to topCoding sequence (CDS) from alignment at P-canaliculata_contig9851:6..263-
>mRNA_P-canaliculata_contig9851.23961.1 ID=mRNA_P-canaliculata_contig9851.23961.1|Name=mRNA_P-canaliculata_contig9851.23961.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=516bp|location=Sequence derived from alignment at P-canaliculata_contig9851:6..263- (Pelvetia canaliculata dioecious)
ATGGGTCCGGTGGTCTCAAACTCTCTTACGCCAAGTCACCGAGGCTTTGA
CCAGTGGCCCGAGAATATGCCGCTAGGAGTTCAGCCCACGATGCAGGAGC
TGACAGACGCCATCCGCTCGTTGGCAAACGGAAAGGGCGTTGGACCGGAC
GGAGTCTCCGTCGACACTCTCAATGGTGATCCCGCCCTACGCCGGAGAAT
GCTCGATATCGTATTTCGTATTTGGAGGGGGGGCGAGGCGCCGAAGCAGT
GGAAAGATATGGGTCCGGTGGTCTCAAACTCTCTTACGCCAAGTCACCGA
GGCTTTGACCAGTGGCCCGAGAATATGCCGCTAGGAGTTCAGCCCACGAT
GCAGGAGCTGACAGACGCCATCCGCTCGTTGGCAAACGGAAAGGGCGTTG
GACCGGACGGAGTCTCCGTCGACACTCTCAATGGTGATCCCGCCCTACGC
CGGAGAATGCTCGATATCGTATTTCGTATTTGGAGGGGGGGCGAGGCGCC
GAAGCAGTGGAAAGAT
back to top