mRNA_P-canaliculata_contig97866.23884.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig97866.23884.1 vs. uniprot
Match: A0A848U100_9GAMM (Uncharacterized protein n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848U100_9GAMM) HSP 1 Score: 92.4 bits (228), Expect = 2.370e-21 Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 1 Query: 1 ETGLD--WESPSARTRVVRFGASSCLASVLSQDPEAVAKEFQLSYCGVLIFNWNEYRWPHLLSEDRKVPDLDYIDLPQNCIDELMDYHITMQTSWLYRYQTA 300
+TG + W SP ART+V+R G+S + SVL Q P AV+ EF++ + GV +F+W EYRWP+L D I+LP +C+ EL+ +H+ T+WL RY+
Sbjct: 45 QTGYECGWISPDARTQVIRHGSSVAMHSVLQQVPGAVSAEFEVIHDGVKVFSWCEYRWPNLQPGDALRYPSGEIELPVDCLSELLQFHVEHHTAWLARYRAV 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97866.23884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97866.23884.1 >prot_P-canaliculata_contig97866.23884.1 ID=prot_P-canaliculata_contig97866.23884.1|Name=mRNA_P-canaliculata_contig97866.23884.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=103bp ETGLDWESPSARTRVVRFGASSCLASVLSQDPEAVAKEFQLSYCGVLIFNback to top mRNA from alignment at P-canaliculata_contig97866:50..358+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig97866.23884.1 ID=mRNA_P-canaliculata_contig97866.23884.1|Name=mRNA_P-canaliculata_contig97866.23884.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=309bp|location=Sequence derived from alignment at P-canaliculata_contig97866:50..358+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig97866:50..358+ >mRNA_P-canaliculata_contig97866.23884.1 ID=mRNA_P-canaliculata_contig97866.23884.1|Name=mRNA_P-canaliculata_contig97866.23884.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=618bp|location=Sequence derived from alignment at P-canaliculata_contig97866:50..358+ (Pelvetia canaliculata dioecious)back to top |