mRNA_P-canaliculata_contig97860.23883.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig97860.23883.1
Unique NamemRNA_P-canaliculata_contig97860.23883.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A518EW98_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EW98_9BACT)

HSP 1 Score: 296 bits (758), Expect = 1.770e-88
Identity = 155/286 (54.20%), Postives = 206/286 (72.03%), Query Frame = 1
Query:   67 SNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQGRSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGS---FIEFPGRTGDDSRSFLEFDSTLQRGVLPGGEL--------VPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELR 891
            S FAV   S+++G VW+LNR I + F +D+DF TVS STIQ+V++ GVPA+G+FS+  PR VRFQP CP ND N++GG  QG++YRLTV ++S+AGIGGGVTVQNTAG+RLETGLN++F+TP S+DPL+LFVDVVAGPPQV +   S    DS   S   ++EF   TG+    +  F+ ++QRGVLP            VP+N YS+  EQF+VVL FNQP+ A+S NVN++ I L+Y       +   WLRVP++V L+ANC+  GA+VR+ PTGIVPQG+E+R
Sbjct:   51 SEFAVRGTSVINGAVWKLNREILIEFTQDLDFSTVSPSTIQIVNTLGVPAIGTFSEAGPRTVRFQPKCPTNDANSDGGLQQGQTYRLTVVAQSTAGIGGGVTVQNTAGERLETGLNVSFTTPTSNDPLILFVDVVAGPPQVRILNESDPEPDSPEDSGVSYVEFGVDTGE--VEYFRFNPSVQRGVLPVDPSDPMMERYKVPLNFYSDTDEQFSVVLNFNQPIIASSDNVNTDKIRLQYFN----DSQGQWLRVPASVALIANCTATGAAVRVTPTGIVPQGAEMR 330          
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A518F0N2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518F0N2_9BACT)

HSP 1 Score: 276 bits (706), Expect = 2.960e-81
Identity = 155/299 (51.84%), Postives = 198/299 (66.22%), Query Frame = 1
Query:   13 GCSSGSGDLAGPVASAGNSNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQGRSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRG----LSGEPIDSASGSFIEFPGRTGDDSRS--FLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELR 891
            GCS G+G      +   +++F V S S++ G +W+LNR I V F  DVDF TVS ST+Q+VDSQG+PA+G++S+  PR VRFQP CP N   ++GGF QGRSYRL +PSES  G+GGGVTV +TAG RLE G+++ FSTP SSD LVLFVD+VAGPP+VV  G      G P DS   S++EF    G D  +  +  FD   Q   +    LVP+NLYS+   QFAVVL+FNQPV    SN++ + I LEY       A  TWLR+P+   L+ NCS  GASVR+ PTGIVPQG+ +R
Sbjct:   23 GCSGGAGTQGLDPSIGPDTDFEVRSTSVVSGAMWRLNREILVEFTHDVDFSTVSSSTVQVVDSQGLPAIGTYSEAGPRTVRFQPRCPTNATYSDGGFAQGRSYRLHLPSESHGGLGGGVTVMDTAGRRLENGVSIDFSTPASSDELVLFVDLVAGPPRVVTMGAGDDFEGSPTDSPY-SYVEF----GSDPEAVEYFRFDPADQTSKI--ASLVPLNLYSDRERQFAVVLKFNQPVANVPSNIHPDLIRLEYYN----DAQATWLRIPARTTLIENCSATGASVRVQPTGIVPQGASMR 310          
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A523PUF0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PUF0_9BACT)

HSP 1 Score: 209 bits (532), Expect = 1.630e-57
Identity = 128/278 (46.04%), Postives = 171/278 (61.51%), Query Frame = 1
Query:   73 FAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQGR-SYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDD--SRSFLEFDSTLQRGVL--PGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELR 891
            F V++ S+  G +WQ+NRAIDVTF +DVDF TVS +TI +V   G PA G FS   PR VRFQP CP  +D ++ G   G   Y L V    +  + GG +V +TAGD L+    + F TP S DP VLF D + GPP+  VRGLSG P+D+   +++E     GDD   R +  +D++LQ GVL  PG E VPIN YS  A + AVV+  +Q V  A++N+  + + LE+L   P   A +W RV + VEL ANC+  GA +R+ P GI+PQ SELR
Sbjct:   52 FHVATISVPAGAIWQINRAIDVTFTKDVDFATVSANTISIVAEDGAPAAGVFSLADPRTVRFQPTCPSLEDFSDAGLTPGGVGYLLEV----AGALAGGPSVHSTAGDVLQESTLVPFETPDSMDPGVLFFDTLPGPPRPRVRGLSGVPLDAEDATYVEL----GDDPLDRVYFLWDASLQMGVLELPGFE-VPINHYSRLANRVAVVIVMDQAVSMAAANLAPDRVSLEWL---PGVGA-SWERVGTRVELEANCTATGARLRLTPLGILPQASELR 316          
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A521K7C4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521K7C4_9BACT)

HSP 1 Score: 201 bits (510), Expect = 4.020e-57
Identity = 119/299 (39.80%), Postives = 172/299 (57.53%), Query Frame = 1
Query:    7 VAGCSSGSGDLAGPVASAGNSNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQGR-SYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDDSRSFLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII 900
            +A CS G    +GP   AG   F ++  ++ DG +W++NR I  TFN  +DFGTV+L+TI + DS G+P  G F+  +P VV FQP CP   D ++ GF  G  SY + V  E S   G  +TV++ +G  L     L F TP S  P  +FVD V GPP  +V   +    D   G+++E  G    ++R + EF+S  Q    PG   +P+NLYS+   Q AV L+ NQPV  A+ N++S+ + LE  +    +    W RV + VELLANC+T GA+VR++P G++PQ + LR +I
Sbjct:   32 LASCSGGXXXSSGP---AGQGGFQITDITVADGSIWKINRPISFTFNVPLDFGTVNLNTINITDSSGLPVTGEFTLDAPTVVTFQPTCPTKPDLSDAGFQPGGVSYTIRVLGEDS---GASLTVKSNSGSSLANSQTLNFVTPNSLQPAQIFVDGVIGPPTPIVHTTTSPATDP--GTYLELGGDP--NNRVYFEFNSLTQSFTTPGD--IPLNLYSDSETQVAVYLEINQPVNPAADNISSQRLLLESFD----STTGNWRRVSTVVELLANCTTSGATVRLLPLGLLPQSALLRVVI 314          
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A2E5X3R3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X3R3_9BACT)

HSP 1 Score: 203 bits (517), Expect = 1.850e-55
Identity = 117/282 (41.49%), Postives = 168/282 (59.57%), Query Frame = 1
Query:   64 NSNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQGR-SYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDD--SRSFLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII 900
            ++ F +   S+ +G VW++NR ID+TF+E  DF TVSL+T+ ++   G PA+GSF Q   R +RFQP CP   D ++ GF  G   YRL V     AG   G ++Q+ AG+ LE    + FSTP+S D + LF+D VAGPP V++R   G P++ AS  ++E     GDD  +R + E D       LP G   PIN YS      A++L+ NQPV   S+N++S  +GLEY   +      +WL VP+ VEL+ NC+  GA++R+ P G++PQG  +RA I
Sbjct:   39 DNTFVILDISVAEGEVWKINRPIDITFSEAYDFATVSLNTVNILTESGAPALGSFLQVDTRTLRFQPTCPTQSDFSDAGFSPGGVRYRLLVVG---AGSNPGASIQSLAGEALEQSQAVQFSTPVSQDAIDLFLDPVAGPPAVIIRA-EGSPLEEAS--YLEL----GDDPDNRVYFERDQATGESSLPPGFEAPINHYSIQENHLALILEINQPVNPGSANISSSCVGLEYAGPN-----SSWLPVPTQVELVINCTESGATLRLSPIGLLPQGRTVRAFI 305          
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A2D5W5P7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W5P7_9BACT)

HSP 1 Score: 201 bits (512), Expect = 8.600e-55
Identity = 126/303 (41.58%), Postives = 171/303 (56.44%), Query Frame = 1
Query:    1 LVVAGCSSGSGDLAGPVASAGNSNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQGR-SYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDD--SRSFLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII 900
             V   CSSG         S   S FA+   S+  G VW++NR ID+TF+   DF TVSL+T+ ++   G PA+GSF Q   R +RFQP CP   D ++ GF  G   YRL+V    S   G G T+Q   G+ LE    + FSTP+S D + LF+D VAGPP VV+R   G  ++ AS  ++E     GDD  +R + E D       LP G   PIN YS      A+VL+ NQPV  AS+N++S  IGLEY   +      +WL +P+ VEL+ NC+  GA++R+ P G++PQG  +RA I
Sbjct:   19 FVAGACSSGVDPT--DTGSGSGSTFAILDISVTQGEVWKINRPIDITFSLPYDFSTVSLNTVNILTENGAPALGSFLQVDTRTLRFQPTCPTLSDYSDAGFSPGGLRYRLSVVGVDS---GPGATIQALTGESLEQSQAVMFSTPVSQDAIDLFLDPVAGPPAVVIRA-EGATLEEAS--YLEL----GDDPDNRVYFERDQVTGESNLPPGFEAPINHYSIVENHLALVLEINQPVNPASANISSSRIGLEYAGPN-----SSWLPIPTDVELVVNCTESGATLRLTPIGLLPQGRIVRAFI 304          
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A2E6D7H7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E6D7H7_9BACT)

HSP 1 Score: 198 bits (503), Expect = 4.170e-54
Identity = 109/288 (37.85%), Postives = 169/288 (58.68%), Query Frame = 1
Query:   58 AGNSNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPS-------PRVVRFQPVCPDNDDNTNGGFLQGRSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDDSRSFLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII 900
            A    F+V S ++L+G+ W+LNR+ID+TFN++VDF TV+++T+ + D  G  A G FS P+        R VRFQP CP   D ++ G +   SYRL V         GGVTV++  G+ LE G+ + FSTP S+D L LF+D V GPP + +RG SG   D     +++  G++      + E + + Q G +P    +P+N YS P  Q +VV+ FNQPV A  +N+N+  + ++Y +      +  W  + S ++L  NC+  GA++R++P GI+PQ S LR ++
Sbjct:  102 ASGDKFSVESVNVLEGMEWKLNRSIDITFNDEVDFSTVTMNTVNVTDPVGRAATGVFSFPTLPDGTVDKRTVRFQPNCPRLADFSDAGLVPNTSYRLVVLGSDQ----GGVTVRSARGEELEIGVLVNFSTPNSTDALTLFLDTVPGPPSIRLRGSSGVATDDLDACYVDLGGQS-----IYFELNLSDQTGRIPVE--LPLNHYSIPENQVSVVVHFNQPVDATPTNINASYVSIQYFD------SLVWTDIQSDMDLFENCTETGAALRMIPRGILPQDSPLRVVV 372          
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A800G1B7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800G1B7_9BACT)

HSP 1 Score: 199 bits (505), Expect = 6.970e-54
Identity = 119/305 (39.02%), Postives = 176/305 (57.70%), Query Frame = 1
Query:    7 VAGCSSGSGDLAGPVASAGNSNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPS-------PRVVRFQPVCPDNDDNTNGGFLQGRSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDDSRSFLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII 900
            V+GC  G G  +G  AS   + F + S ++L G+ W+LNR+ID+TF++DVDF TV+++TI +VD  G  A G FS P+        R VRFQP CP   D ++ G +   SYRL V   +S    GGVTV + +G+ L+ G  + FSTP SSD L LF+D V GPP + +RG SG   D     +++  G+     R + E D + Q G +P    +P+N YS P  Q +VV+ FNQPV A  +N++   + ++Y           W  + S ++L  NC+  GA++R++P GI+PQ S LR ++
Sbjct:   28 VSGC--GGGVASGTGAS--GAQFTIESINVLQGMEWKLNRSIDITFSDDVDFATVTMNTINIVDPVGRAATGVFSFPTLPNGMIDKRTVRFQPNCPRLPDFSDAGLVPSTSYRLVVLGSTS----GGVTVLSASGESLDVGGMVNFSTPNSSDALTLFLDTVPGPPSIRLRGSSGVATDDLDACYVDVGGQ-----RIYFELDLSDQTGRIPID--LPLNHYSIPENQVSVVVHFNQPVDATPTNIDPSYVSIQYF------TGLVWTDIQSDMDLFENCTDTGAALRMIPRGILPQDSPLRVVV 311          
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A2D6Q9S2_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A2D6Q9S2_9ARCH)

HSP 1 Score: 196 bits (497), Expect = 8.340e-53
Identity = 112/295 (37.97%), Postives = 170/295 (57.63%), Query Frame = 1
Query:   43 GPVASAGNSN--FAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPS-------PRVVRFQPVCPDNDDNTNGGFLQGRSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDDSRSFLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII 900
            G  A +G+S   F+V S ++L+G+ W+LNR+ID+TFN++VDF TV+++T+ +VD  G  A G FS P+        R VRFQP CP   D ++ G +   SYRL V         GGVTV++ +G+ LE G+ + FSTP S+D L LF+  V GPP + +RG SG   D     +++  G+       + E   + Q G +P     P+N YS P  Q +VV+ FN PV A   N+NS  + ++Y +      +  W  + S ++L  NC+  GA++R++P GI+PQ S LR ++
Sbjct:   52 GVTAGSGSSGVKFSVESVNVLEGMEWKLNRSIDITFNDEVDFSTVTMNTVNIVDPVGRAATGVFSFPTLPDGTVDTRTVRFQPNCPRLVDFSDAGLVPNTSYRLVVLGSDQ----GGVTVRSASGEELEVGVLVTFSTPNSTDALTLFLXTVPGPPSIRLRGSSGVATDDLDACYVDLGGQL-----XYFELXLSDQXGRIPVEX--PLNHYSIPENQVSVVVHFNXPVXATPXNINSSYVSIQYFD------SLVWTDIQSDMDLFENCTETGAALRMIPRGILPQDSPLRVVV 329          
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A2D5XPE9_9BACT (Uncharacterized protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XPE9_9BACT)

HSP 1 Score: 189 bits (480), Expect = 1.610e-50
Identity = 119/303 (39.27%), Postives = 171/303 (56.44%), Query Frame = 1
Query:    1 LVVAGCSSGSGDLAGPVASAGNSN-FAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQG-RSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDDSRSFLEFDSTLQRGVL--PGG-ELVPI-NLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELR 891
            ++  GC     D     +  G +N F V S S+    +WQ+NRAID+TF   +DF TV L+TI +    G+ A G+FSQ     VRFQP CP   DN++ G L G R+Y L V   +      GVTVQ+T G  +  GL + F TP S+DP  LF+D V GPP V VR   G  +D    +++E     GD SR +     T Q+G L  PGG +  P+ N YS+   Q+++V+ FNQP+ ++  N++S  I LEY + D +     +    + VEL+ANC++ GA++R+ P G+VPQG  +R
Sbjct:   43 MISVGCGGSISDAGSGGSDTGGANGFNVVSVSVSQAQIWQINRAIDITFTRALDFSTVGLNTISIATPSGLSATGTFSQLDAVTVRFQPSCPTLADNSDAGLLPGGRTYTLHVLDTTV----NGVTVQDTNGFGVTQGLVVTFQTPDSTDPQALFLDTVPGPPDVRVRLRGGVAVDDLDATYLE----RGDGSREYFYQQLTTQQGELIPPGGSQYFPLLNKYSDVDSQWSLVVFFNQPIISSPENISSNLIALEYEQQDGVG---DFAGFGTQVELIANCTSTGAALRVTPLGVVPQGKRMR 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A518EW98_9BACT1.770e-8854.20Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A518F0N2_9BACT2.960e-8151.84Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A523PUF0_9BACT1.630e-5746.04Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A521K7C4_9BACT4.020e-5739.80Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A2E5X3R3_9BACT1.850e-5541.49Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D5W5P7_9BACT8.600e-5541.58Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2E6D7H7_9BACT4.170e-5437.85Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A800G1B7_9BACT6.970e-5439.02Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D6Q9S2_9ARCH8.340e-5337.97Uncharacterized protein n=1 Tax=Candidatus Woesear... [more]
A0A2D5XPE9_9BACT1.610e-5039.27Uncharacterized protein n=2 Tax=Planctomycetes bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97860contigP-canaliculata_contig97860:171..1070 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size900
Cds size900
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817341.172778-CDS-P-canaliculata_contig97860:170..10701622817341.172778-CDS-P-canaliculata_contig97860:170..1070Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97860 171..1070 +
1693495234.2644784-CDS-P-canaliculata_contig97860:170..10701693495234.2644784-CDS-P-canaliculata_contig97860:170..1070Pelvetia canaliculata dioeciousCDSP-canaliculata_contig97860 171..1070 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97860.23883.1prot_P-canaliculata_contig97860.23883.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig97860 171..1070 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig97860.23883.1

>prot_P-canaliculata_contig97860.23883.1 ID=prot_P-canaliculata_contig97860.23883.1|Name=mRNA_P-canaliculata_contig97860.23883.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=300bp
LVVAGCSSGSGDLAGPVASAGNSNFAVSSASILDGVVWQLNRAIDVTFNE
DVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGG
FLQGRSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPL
VLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDDSRSFLEFDST
LQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEY
LEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII
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mRNA from alignment at P-canaliculata_contig97860:171..1070+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig97860.23883.1 ID=mRNA_P-canaliculata_contig97860.23883.1|Name=mRNA_P-canaliculata_contig97860.23883.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=900bp|location=Sequence derived from alignment at P-canaliculata_contig97860:171..1070+ (Pelvetia canaliculata dioecious)
CTCGTTGTCGCCGGTTGTAGCAGCGGTAGCGGCGACCTCGCGGGGCCGGT AGCGAGCGCCGGGAACAGCAACTTTGCGGTCTCTTCAGCGTCGATCCTCG ACGGCGTAGTTTGGCAGCTGAATCGCGCCATCGACGTCACGTTCAACGAG GACGTCGACTTCGGGACGGTATCGCTTTCGACGATCCAGCTTGTCGACAG CCAAGGCGTCCCTGCGGTCGGCTCCTTCTCTCAGCCGTCGCCGCGTGTGG TCCGCTTCCAGCCGGTTTGCCCGGATAACGACGACAACACGAACGGCGGC TTCCTTCAAGGGCGCAGCTACCGCTTGACGGTGCCTTCGGAATCCTCCGC AGGCATCGGCGGCGGAGTGACTGTTCAGAACACCGCGGGGGATCGCCTGG AGACGGGTCTCAACCTAGCGTTCAGCACGCCTCTCTCCAGCGATCCGCTC GTGCTCTTCGTGGACGTCGTCGCCGGCCCGCCTCAGGTCGTCGTACGCGG CCTGAGTGGCGAGCCTATCGACTCTGCCAGCGGCTCTTTCATCGAGTTCC CTGGCCGCACAGGCGATGACAGCCGCTCATTCCTGGAGTTCGACTCGACG CTGCAGCGCGGCGTCCTGCCAGGAGGTGAACTCGTTCCGATCAACCTCTA CAGCAACCCGGCAGAGCAGTTTGCCGTGGTTCTGCAGTTCAATCAGCCCG TTTTCGCGGCCTCGAGCAACGTCAACTCGGAGAACATCGGTCTCGAGTAT CTCGAGATTGACCCGATTACTGCGGCGGAAACCTGGCTGCGCGTGCCCTC GACCGTTGAGCTGCTGGCCAACTGCAGCACCGTCGGCGCGTCGGTGAGGA TCGTTCCGACCGGCATAGTGCCCCAGGGTTCAGAGCTCCGGGCGATCATC
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Coding sequence (CDS) from alignment at P-canaliculata_contig97860:171..1070+

>mRNA_P-canaliculata_contig97860.23883.1 ID=mRNA_P-canaliculata_contig97860.23883.1|Name=mRNA_P-canaliculata_contig97860.23883.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1800bp|location=Sequence derived from alignment at P-canaliculata_contig97860:171..1070+ (Pelvetia canaliculata dioecious)
CTCGTTGTCGCCGGTTGTAGCAGCGGTAGCGGCGACCTCGCGGGGCCGGT
AGCGAGCGCCGGGAACAGCAACTTTGCGGTCTCTTCAGCGTCGATCCTCG
ACGGCGTAGTTTGGCAGCTGAATCGCGCCATCGACGTCACGTTCAACGAG
GACGTCGACTTCGGGACGGTATCGCTTTCGACGATCCAGCTTGTCGACAG
CCAAGGCGTCCCTGCGGTCGGCTCCTTCTCTCAGCCGTCGCCGCGTGTGG
TCCGCTTCCAGCCGGTTTGCCCGGATAACGACGACAACACGAACGGCGGC
TTCCTTCAAGGGCGCAGCTACCGCTTGACGGTGCCTTCGGAATCCTCCGC
AGGCATCGGCGGCGGAGTGACTGTTCAGAACACCGCGGGGGATCGCCTGG
AGACGGGTCTCAACCTAGCGTTCAGCACGCCTCTCTCCAGCGATCCGCTC
GTGCTCTTCGTGGACGTCGTCGCCGGCCCGCCTCAGGTCGTCGTACGCGG
CCTGAGTGGCGAGCCTATCGACTCTGCCAGCGGCTCTTTCATCGAGTTCC
CTGGCCGCACAGGCGATGACAGCCGCTCATTCCTGGAGTTCGACTCGACG
CTGCAGCGCGGCGTCCTGCCAGGAGGTGAACTCGTTCCGATCAACCTCTA
CAGCAACCCGGCAGAGCAGTTTGCCGTGGTTCTGCAGTTCAATCAGCCCG
TTTTCGCGGCCTCGAGCAACGTCAACTCGGAGAACATCGGTCTCGAGTAT
CTCGAGATTGACCCGATTACTGCGGCGGAAACCTGGCTGCGCGTGCCCTC
GACCGTTGAGCTGCTGGCCAACTGCAGCACCGTCGGCGCGTCGGTGAGGA
TCGTTCCGACCGGCATAGTGCCCCAGGGTTCAGAGCTCCGGGCGATCATC
CTCGTTGTCGCCGGTTGTAGCAGCGGTAGCGGCGACCTCGCGGGGCCGGT
AGCGAGCGCCGGGAACAGCAACTTTGCGGTCTCTTCAGCGTCGATCCTCG
ACGGCGTAGTTTGGCAGCTGAATCGCGCCATCGACGTCACGTTCAACGAG
GACGTCGACTTCGGGACGGTATCGCTTTCGACGATCCAGCTTGTCGACAG
CCAAGGCGTCCCTGCGGTCGGCTCCTTCTCTCAGCCGTCGCCGCGTGTGG
TCCGCTTCCAGCCGGTTTGCCCGGATAACGACGACAACACGAACGGCGGC
TTCCTTCAAGGGCGCAGCTACCGCTTGACGGTGCCTTCGGAATCCTCCGC
AGGCATCGGCGGCGGAGTGACTGTTCAGAACACCGCGGGGGATCGCCTGG
AGACGGGTCTCAACCTAGCGTTCAGCACGCCTCTCTCCAGCGATCCGCTC
GTGCTCTTCGTGGACGTCGTCGCCGGCCCGCCTCAGGTCGTCGTACGCGG
CCTGAGTGGCGAGCCTATCGACTCTGCCAGCGGCTCTTTCATCGAGTTCC
CTGGCCGCACAGGCGATGACAGCCGCTCATTCCTGGAGTTCGACTCGACG
CTGCAGCGCGGCGTCCTGCCAGGAGGTGAACTCGTTCCGATCAACCTCTA
CAGCAACCCGGCAGAGCAGTTTGCCGTGGTTCTGCAGTTCAATCAGCCCG
TTTTCGCGGCCTCGAGCAACGTCAACTCGGAGAACATCGGTCTCGAGTAT
CTCGAGATTGACCCGATTACTGCGGCGGAAACCTGGCTGCGCGTGCCCTC
GACCGTTGAGCTGCTGGCCAACTGCAGCACCGTCGGCGCGTCGGTGAGGA
TCGTTCCGACCGGCATAGTGCCCCAGGGTTCAGAGCTCCGGGCGATCATC
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