mRNA_P-canaliculata_contig97860.23883.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A518EW98_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EW98_9BACT) HSP 1 Score: 296 bits (758), Expect = 1.770e-88 Identity = 155/286 (54.20%), Postives = 206/286 (72.03%), Query Frame = 1 Query: 67 SNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQGRSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGS---FIEFPGRTGDDSRSFLEFDSTLQRGVLPGGEL--------VPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELR 891 S FAV S+++G VW+LNR I + F +D+DF TVS STIQ+V++ GVPA+G+FS+ PR VRFQP CP ND N++GG QG++YRLTV ++S+AGIGGGVTVQNTAG+RLETGLN++F+TP S+DPL+LFVDVVAGPPQV + S DS S ++EF TG+ + F+ ++QRGVLP VP+N YS+ EQF+VVL FNQP+ A+S NVN++ I L+Y + WLRVP++V L+ANC+ GA+VR+ PTGIVPQG+E+R Sbjct: 51 SEFAVRGTSVINGAVWKLNREILIEFTQDLDFSTVSPSTIQIVNTLGVPAIGTFSEAGPRTVRFQPKCPTNDANSDGGLQQGQTYRLTVVAQSTAGIGGGVTVQNTAGERLETGLNVSFTTPTSNDPLILFVDVVAGPPQVRILNESDPEPDSPEDSGVSYVEFGVDTGE--VEYFRFNPSVQRGVLPVDPSDPMMERYKVPLNFYSDTDEQFSVVLNFNQPIIASSDNVNTDKIRLQYFN----DSQGQWLRVPASVALIANCTATGAAVRVTPTGIVPQGAEMR 330
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A518F0N2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518F0N2_9BACT) HSP 1 Score: 276 bits (706), Expect = 2.960e-81 Identity = 155/299 (51.84%), Postives = 198/299 (66.22%), Query Frame = 1 Query: 13 GCSSGSGDLAGPVASAGNSNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQGRSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRG----LSGEPIDSASGSFIEFPGRTGDDSRS--FLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELR 891 GCS G+G + +++F V S S++ G +W+LNR I V F DVDF TVS ST+Q+VDSQG+PA+G++S+ PR VRFQP CP N ++GGF QGRSYRL +PSES G+GGGVTV +TAG RLE G+++ FSTP SSD LVLFVD+VAGPP+VV G G P DS S++EF G D + + FD Q + LVP+NLYS+ QFAVVL+FNQPV SN++ + I LEY A TWLR+P+ L+ NCS GASVR+ PTGIVPQG+ +R Sbjct: 23 GCSGGAGTQGLDPSIGPDTDFEVRSTSVVSGAMWRLNREILVEFTHDVDFSTVSSSTVQVVDSQGLPAIGTYSEAGPRTVRFQPRCPTNATYSDGGFAQGRSYRLHLPSESHGGLGGGVTVMDTAGRRLENGVSIDFSTPASSDELVLFVDLVAGPPRVVTMGAGDDFEGSPTDSPY-SYVEF----GSDPEAVEYFRFDPADQTSKI--ASLVPLNLYSDRERQFAVVLKFNQPVANVPSNIHPDLIRLEYYN----DAQATWLRIPARTTLIENCSATGASVRVQPTGIVPQGASMR 310
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A523PUF0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PUF0_9BACT) HSP 1 Score: 209 bits (532), Expect = 1.630e-57 Identity = 128/278 (46.04%), Postives = 171/278 (61.51%), Query Frame = 1 Query: 73 FAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQGR-SYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDD--SRSFLEFDSTLQRGVL--PGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELR 891 F V++ S+ G +WQ+NRAIDVTF +DVDF TVS +TI +V G PA G FS PR VRFQP CP +D ++ G G Y L V + + GG +V +TAGD L+ + F TP S DP VLF D + GPP+ VRGLSG P+D+ +++E GDD R + +D++LQ GVL PG E VPIN YS A + AVV+ +Q V A++N+ + + LE+L P A +W RV + VEL ANC+ GA +R+ P GI+PQ SELR Sbjct: 52 FHVATISVPAGAIWQINRAIDVTFTKDVDFATVSANTISIVAEDGAPAAGVFSLADPRTVRFQPTCPSLEDFSDAGLTPGGVGYLLEV----AGALAGGPSVHSTAGDVLQESTLVPFETPDSMDPGVLFFDTLPGPPRPRVRGLSGVPLDAEDATYVEL----GDDPLDRVYFLWDASLQMGVLELPGFE-VPINHYSRLANRVAVVIVMDQAVSMAAANLAPDRVSLEWL---PGVGA-SWERVGTRVELEANCTATGARLRLTPLGILPQASELR 316
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A521K7C4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521K7C4_9BACT) HSP 1 Score: 201 bits (510), Expect = 4.020e-57 Identity = 119/299 (39.80%), Postives = 172/299 (57.53%), Query Frame = 1 Query: 7 VAGCSSGSGDLAGPVASAGNSNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQGR-SYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDDSRSFLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII 900 +A CS G +GP AG F ++ ++ DG +W++NR I TFN +DFGTV+L+TI + DS G+P G F+ +P VV FQP CP D ++ GF G SY + V E S G +TV++ +G L L F TP S P +FVD V GPP +V + D G+++E G ++R + EF+S Q PG +P+NLYS+ Q AV L+ NQPV A+ N++S+ + LE + + W RV + VELLANC+T GA+VR++P G++PQ + LR +I Sbjct: 32 LASCSGGXXXSSGP---AGQGGFQITDITVADGSIWKINRPISFTFNVPLDFGTVNLNTINITDSSGLPVTGEFTLDAPTVVTFQPTCPTKPDLSDAGFQPGGVSYTIRVLGEDS---GASLTVKSNSGSSLANSQTLNFVTPNSLQPAQIFVDGVIGPPTPIVHTTTSPATDP--GTYLELGGDP--NNRVYFEFNSLTQSFTTPGD--IPLNLYSDSETQVAVYLEINQPVNPAADNISSQRLLLESFD----STTGNWRRVSTVVELLANCTTSGATVRLLPLGLLPQSALLRVVI 314
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A2E5X3R3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X3R3_9BACT) HSP 1 Score: 203 bits (517), Expect = 1.850e-55 Identity = 117/282 (41.49%), Postives = 168/282 (59.57%), Query Frame = 1 Query: 64 NSNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQGR-SYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDD--SRSFLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII 900 ++ F + S+ +G VW++NR ID+TF+E DF TVSL+T+ ++ G PA+GSF Q R +RFQP CP D ++ GF G YRL V AG G ++Q+ AG+ LE + FSTP+S D + LF+D VAGPP V++R G P++ AS ++E GDD +R + E D LP G PIN YS A++L+ NQPV S+N++S +GLEY + +WL VP+ VEL+ NC+ GA++R+ P G++PQG +RA I Sbjct: 39 DNTFVILDISVAEGEVWKINRPIDITFSEAYDFATVSLNTVNILTESGAPALGSFLQVDTRTLRFQPTCPTQSDFSDAGFSPGGVRYRLLVVG---AGSNPGASIQSLAGEALEQSQAVQFSTPVSQDAIDLFLDPVAGPPAVIIRA-EGSPLEEAS--YLEL----GDDPDNRVYFERDQATGESSLPPGFEAPINHYSIQENHLALILEINQPVNPGSANISSSCVGLEYAGPN-----SSWLPVPTQVELVINCTESGATLRLSPIGLLPQGRTVRAFI 305
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A2D5W5P7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W5P7_9BACT) HSP 1 Score: 201 bits (512), Expect = 8.600e-55 Identity = 126/303 (41.58%), Postives = 171/303 (56.44%), Query Frame = 1 Query: 1 LVVAGCSSGSGDLAGPVASAGNSNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQGR-SYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDD--SRSFLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII 900 V CSSG S S FA+ S+ G VW++NR ID+TF+ DF TVSL+T+ ++ G PA+GSF Q R +RFQP CP D ++ GF G YRL+V S G G T+Q G+ LE + FSTP+S D + LF+D VAGPP VV+R G ++ AS ++E GDD +R + E D LP G PIN YS A+VL+ NQPV AS+N++S IGLEY + +WL +P+ VEL+ NC+ GA++R+ P G++PQG +RA I Sbjct: 19 FVAGACSSGVDPT--DTGSGSGSTFAILDISVTQGEVWKINRPIDITFSLPYDFSTVSLNTVNILTENGAPALGSFLQVDTRTLRFQPTCPTLSDYSDAGFSPGGLRYRLSVVGVDS---GPGATIQALTGESLEQSQAVMFSTPVSQDAIDLFLDPVAGPPAVVIRA-EGATLEEAS--YLEL----GDDPDNRVYFERDQVTGESNLPPGFEAPINHYSIVENHLALVLEINQPVNPASANISSSRIGLEYAGPN-----SSWLPIPTDVELVVNCTESGATLRLTPIGLLPQGRIVRAFI 304
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A2E6D7H7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E6D7H7_9BACT) HSP 1 Score: 198 bits (503), Expect = 4.170e-54 Identity = 109/288 (37.85%), Postives = 169/288 (58.68%), Query Frame = 1 Query: 58 AGNSNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPS-------PRVVRFQPVCPDNDDNTNGGFLQGRSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDDSRSFLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII 900 A F+V S ++L+G+ W+LNR+ID+TFN++VDF TV+++T+ + D G A G FS P+ R VRFQP CP D ++ G + SYRL V GGVTV++ G+ LE G+ + FSTP S+D L LF+D V GPP + +RG SG D +++ G++ + E + + Q G +P +P+N YS P Q +VV+ FNQPV A +N+N+ + ++Y + + W + S ++L NC+ GA++R++P GI+PQ S LR ++ Sbjct: 102 ASGDKFSVESVNVLEGMEWKLNRSIDITFNDEVDFSTVTMNTVNVTDPVGRAATGVFSFPTLPDGTVDKRTVRFQPNCPRLADFSDAGLVPNTSYRLVVLGSDQ----GGVTVRSARGEELEIGVLVNFSTPNSTDALTLFLDTVPGPPSIRLRGSSGVATDDLDACYVDLGGQS-----IYFELNLSDQTGRIPVE--LPLNHYSIPENQVSVVVHFNQPVDATPTNINASYVSIQYFD------SLVWTDIQSDMDLFENCTETGAALRMIPRGILPQDSPLRVVV 372
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A800G1B7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800G1B7_9BACT) HSP 1 Score: 199 bits (505), Expect = 6.970e-54 Identity = 119/305 (39.02%), Postives = 176/305 (57.70%), Query Frame = 1 Query: 7 VAGCSSGSGDLAGPVASAGNSNFAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPS-------PRVVRFQPVCPDNDDNTNGGFLQGRSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDDSRSFLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII 900 V+GC G G +G AS + F + S ++L G+ W+LNR+ID+TF++DVDF TV+++TI +VD G A G FS P+ R VRFQP CP D ++ G + SYRL V +S GGVTV + +G+ L+ G + FSTP SSD L LF+D V GPP + +RG SG D +++ G+ R + E D + Q G +P +P+N YS P Q +VV+ FNQPV A +N++ + ++Y W + S ++L NC+ GA++R++P GI+PQ S LR ++ Sbjct: 28 VSGC--GGGVASGTGAS--GAQFTIESINVLQGMEWKLNRSIDITFSDDVDFATVTMNTINIVDPVGRAATGVFSFPTLPNGMIDKRTVRFQPNCPRLPDFSDAGLVPSTSYRLVVLGSTS----GGVTVLSASGESLDVGGMVNFSTPNSSDALTLFLDTVPGPPSIRLRGSSGVATDDLDACYVDVGGQ-----RIYFELDLSDQTGRIPID--LPLNHYSIPENQVSVVVHFNQPVDATPTNIDPSYVSIQYF------TGLVWTDIQSDMDLFENCTDTGAALRMIPRGILPQDSPLRVVV 311
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A2D6Q9S2_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A2D6Q9S2_9ARCH) HSP 1 Score: 196 bits (497), Expect = 8.340e-53 Identity = 112/295 (37.97%), Postives = 170/295 (57.63%), Query Frame = 1 Query: 43 GPVASAGNSN--FAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPS-------PRVVRFQPVCPDNDDNTNGGFLQGRSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDDSRSFLEFDSTLQRGVLPGGELVPINLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELRAII 900 G A +G+S F+V S ++L+G+ W+LNR+ID+TFN++VDF TV+++T+ +VD G A G FS P+ R VRFQP CP D ++ G + SYRL V GGVTV++ +G+ LE G+ + FSTP S+D L LF+ V GPP + +RG SG D +++ G+ + E + Q G +P P+N YS P Q +VV+ FN PV A N+NS + ++Y + + W + S ++L NC+ GA++R++P GI+PQ S LR ++ Sbjct: 52 GVTAGSGSSGVKFSVESVNVLEGMEWKLNRSIDITFNDEVDFSTVTMNTVNIVDPVGRAATGVFSFPTLPDGTVDTRTVRFQPNCPRLVDFSDAGLVPNTSYRLVVLGSDQ----GGVTVRSASGEELEVGVLVTFSTPNSTDALTLFLXTVPGPPSIRLRGSSGVATDDLDACYVDLGGQL-----XYFELXLSDQXGRIPVEX--PLNHYSIPENQVSVVVHFNXPVXATPXNINSSYVSIQYFD------SLVWTDIQSDMDLFENCTETGAALRMIPRGILPQDSPLRVVV 329
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Match: A0A2D5XPE9_9BACT (Uncharacterized protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XPE9_9BACT) HSP 1 Score: 189 bits (480), Expect = 1.610e-50 Identity = 119/303 (39.27%), Postives = 171/303 (56.44%), Query Frame = 1 Query: 1 LVVAGCSSGSGDLAGPVASAGNSN-FAVSSASILDGVVWQLNRAIDVTFNEDVDFGTVSLSTIQLVDSQGVPAVGSFSQPSPRVVRFQPVCPDNDDNTNGGFLQG-RSYRLTVPSESSAGIGGGVTVQNTAGDRLETGLNLAFSTPLSSDPLVLFVDVVAGPPQVVVRGLSGEPIDSASGSFIEFPGRTGDDSRSFLEFDSTLQRGVL--PGG-ELVPI-NLYSNPAEQFAVVLQFNQPVFAASSNVNSENIGLEYLEIDPITAAETWLRVPSTVELLANCSTVGASVRIVPTGIVPQGSELR 891 ++ GC D + G +N F V S S+ +WQ+NRAID+TF +DF TV L+TI + G+ A G+FSQ VRFQP CP DN++ G L G R+Y L V + GVTVQ+T G + GL + F TP S+DP LF+D V GPP V VR G +D +++E GD SR + T Q+G L PGG + P+ N YS+ Q+++V+ FNQP+ ++ N++S I LEY + D + + + VEL+ANC++ GA++R+ P G+VPQG +R Sbjct: 43 MISVGCGGSISDAGSGGSDTGGANGFNVVSVSVSQAQIWQINRAIDITFTRALDFSTVGLNTISIATPSGLSATGTFSQLDAVTVRFQPSCPTLADNSDAGLLPGGRTYTLHVLDTTV----NGVTVQDTNGFGVTQGLVVTFQTPDSTDPQALFLDTVPGPPDVRVRLRGGVAVDDLDATYLE----RGDGSREYFYQQLTTQQGELIPPGGSQYFPLLNKYSDVDSQWSLVVFFNQPIISSPENISSNLIALEYEQQDGVG---DFAGFGTQVELIANCTSTGAALRVTPLGVVPQGKRMR 334 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97860.23883.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97860.23883.1 >prot_P-canaliculata_contig97860.23883.1 ID=prot_P-canaliculata_contig97860.23883.1|Name=mRNA_P-canaliculata_contig97860.23883.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=300bp LVVAGCSSGSGDLAGPVASAGNSNFAVSSASILDGVVWQLNRAIDVTFNEback to top mRNA from alignment at P-canaliculata_contig97860:171..1070+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig97860.23883.1 ID=mRNA_P-canaliculata_contig97860.23883.1|Name=mRNA_P-canaliculata_contig97860.23883.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=900bp|location=Sequence derived from alignment at P-canaliculata_contig97860:171..1070+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig97860:171..1070+ >mRNA_P-canaliculata_contig97860.23883.1 ID=mRNA_P-canaliculata_contig97860.23883.1|Name=mRNA_P-canaliculata_contig97860.23883.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1800bp|location=Sequence derived from alignment at P-canaliculata_contig97860:171..1070+ (Pelvetia canaliculata dioecious)back to top |