Homology
BLAST of mRNA_P-canaliculata_contig9773.23874.1 vs. uniprot
Match:
D7G585_ECTSI (MCU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G585_ECTSI)
HSP 1 Score: 159 bits (402), Expect = 1.570e-38
Identity = 129/325 (39.69%), Postives = 179/325 (55.08%), Query Frame = 1
Query: 364 RDEMCLRARKIVRQETAETGAELDALSAQVEKLKRAMKDEHSYRKAAERRCRQARDTSSRISRYLDNILRVNEELVMRRTKTSIPPRSAGQ---RSTPTQERGGQDKPERANGPKNSPLGRRECGTLGELHLGAAVEDALRAGRARGDPIPFLEALYERIGFSVMQRE-GEASGTHSLPTSPSRDXXXXXXXXXXXXXXXXQDEREGPYNVKIVVSGGDDGFFLREGMDRNLLAGAQSASRLKET----KRTVRG--EDGVGNRIREGRSPSKPGYSFARSPHRRAVSSAERSPMMLRRLEDLVTQLKRERVDVEQGYKTVVQRA 1308
R + C RARK R+ETA ++L +L+ ++EKL+R + DE + R++AE + +A+ T+ RISRYLD+IL VN+ELV T +S+ P +AGQ R+ +R + A +N L + G + + AAV++A GR GDP+P L ALYERIGFS MQ E G GT SLPTSP R D+ E ++V GFF + D +L ++ + + R+ G G GN G +K GYSFA SP R S+AERSP +++RLE L +QL+RER DVEQ YK VV R+
Sbjct: 9 RKDRCSRARKTARRETAAADSQLTSLARRLEKLQRTLDDERASRQSAELKHHRAKSTTIRISRYLDSILNVNQELVAAGTSSSLTP-TAGQPVPRALGELQRKQSIRDSYATPRRNPAL--EDDG----IDIRAAVKEAYCVGRTGGDPVPSLTALYERIGFSAMQGEDGHHGGTPSLPTSPRR---ARVGNTAEAYRFRDVDDGEDYGRQRLVEPTAVGGFFAED--DAEVLESSRRQASAHQVDDGGSRSANGGKHHGTGNAFVGGGVTAK-GYSFANSPLVRPTSAAERSPEVMKRLEALASQLERERSDVEQWYKDVVHRS 320
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9773.23874.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 1.57e-38 / Id = 39.69 Sequence D7G585_ECTSI
Match Name E-value Identity Description
D7G585_ECTSI 1.570e-38 39.69 MCU domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 161.8 Seed ortholog evalue 7.8e-37 Seed eggNOG ortholog 2880.D7G585 Preferred name CCDC109B KEGG rclass RC00209,RC02895 KEGG ko ko:K06125,ko:K14831,ko:K20858 KEGG TC 1.A.77.1 KEGG Reaction R05000,R05616,R07273 KEGG Pathway ko00130,ko01100,ko01110,ko04020,ko04218,ko04621,map00130,map01100,map01110,map04020,map04218,map04621 KEGG Module M00128 GOs GO:0002009,GO:0002791,GO:0002793,GO:0003008,GO:0003674,GO:0005215,GO:0005216,GO:0005246,GO:0005261,GO:0005262,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006839,GO:0006851,GO:0006873,GO:0006874,GO:0006875,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007165,GO:0007275,GO:0007369,GO:0007610,GO:0007611,GO:0007613,GO:0007615,GO:0008016,GO:0008150,GO:0008200,GO:0008324,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009987,GO:0010646,GO:0010647,GO:0010817,GO:0015075,GO:0015085,GO:0015267,GO:0015291,GO:0015292,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0016247,GO:0016248,GO:0019222,GO:0019722,GO:0019725,GO:0019855,GO:0019866,GO:0019932,GO:0022607,GO:0022803,GO:0022804,GO:0022838,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0023056,GO:0030001,GO:0030003,GO:0030029,GO:0030036,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031323,GO:0031966,GO:0031967,GO:0031975,GO:0032024,GO:0032501,GO:0032502,GO:0032592,GO:0032879,GO:0032880,GO:0032991,GO:0033500,GO:0034220,GO:0034702,GO:0034703,GO:0034704,GO:0035556,GO:0036444,GO:0042592,GO:0042593,GO:0042802,GO:0043009,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044057,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0046873,GO:0046883,GO:0046887,GO:0048518,GO:0048522,GO:0048583,GO:0048598,GO:0048729,GO:0048856,GO:0048878,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0050796,GO:0050801,GO:0050877,GO:0050890,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051259,GO:0051260,GO:0051560,GO:0051561,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060026,GO:0060027,GO:0060401,GO:0060429,GO:0061041,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070509,GO:0070588,GO:0070838,GO:0071840,GO:0072375,GO:0072503,GO:0072507,GO:0072511,GO:0080134,GO:0090087,GO:0090276,GO:0090277,GO:0097435,GO:0098573,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098772,GO:0098796,GO:0098798,GO:0098800,GO:0099106,GO:1902495,GO:1903034,GO:1903426,GO:1903522,GO:1903530,GO:1903532,GO:1904951,GO:1990246,GO:1990351,GO:1990542,GO:2000377 EggNOG free text desc. uniporter activity EggNOG OGs KOG2966@1,KOG2966@2759 EC 2.5.1.39 COG Functional cat. S Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko01000,ko01006,ko02000,ko03009 Hectar predicted targeting category other localisation Ec32 ortholog description hypothetical protein Ec32 ortholog Ec-14_006605.1 Exons 5 Model size 1392 Cds size 1392 Stop 0 Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622817340.2436264-CDS-P-canaliculata_contig9773:4632..4719 1622817340.2436264-CDS-P-canaliculata_contig9773:4632..4719 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9773 4633..4719 - 1693495233.6272917-CDS-P-canaliculata_contig9773:4632..4719 1693495233.6272917-CDS-P-canaliculata_contig9773:4632..4719 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9773 4633..4719 - 1622817340.2581587-CDS-P-canaliculata_contig9773:4998..5847 1622817340.2581587-CDS-P-canaliculata_contig9773:4998..5847 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9773 4999..5847 - 1693495233.643673-CDS-P-canaliculata_contig9773:4998..5847 1693495233.643673-CDS-P-canaliculata_contig9773:4998..5847 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9773 4999..5847 - 1622817340.2722588-CDS-P-canaliculata_contig9773:6022..6124 1622817340.2722588-CDS-P-canaliculata_contig9773:6022..6124 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9773 6023..6124 - 1693495233.659867-CDS-P-canaliculata_contig9773:6022..6124 1693495233.659867-CDS-P-canaliculata_contig9773:6022..6124 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9773 6023..6124 - 1622817340.2861316-CDS-P-canaliculata_contig9773:6322..6481 1622817340.2861316-CDS-P-canaliculata_contig9773:6322..6481 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9773 6323..6481 - 1693495233.6722348-CDS-P-canaliculata_contig9773:6322..6481 1693495233.6722348-CDS-P-canaliculata_contig9773:6322..6481 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9773 6323..6481 - 1622817340.3037791-CDS-P-canaliculata_contig9773:6660..6855 1622817340.3037791-CDS-P-canaliculata_contig9773:6660..6855 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9773 6661..6855 - 1693495233.6836607-CDS-P-canaliculata_contig9773:6660..6855 1693495233.6836607-CDS-P-canaliculata_contig9773:6660..6855 Pelvetia canaliculata dioecious CDS P-canaliculata_contig9773 6661..6855 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9773.23874.1
>prot_P-canaliculata_contig9773.23874.1 ID=prot_P-canaliculata_contig9773.23874.1|Name=mRNA_P-canaliculata_contig9773.23874.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=464bp
ERRQSIDEVHSLRTDLARRHEDLKYTQEVQTLTEQDQANAVRLSHEQLLA back to top mRNA from alignment at P-canaliculata_contig9773:4633..6855-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9773.23874.1 ID=mRNA_P-canaliculata_contig9773.23874.1|Name=mRNA_P-canaliculata_contig9773.23874.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2223bp|location=Sequence derived from alignment at P-canaliculata_contig9773:4633..6855- (Pelvetia canaliculata dioecious)GAACGCAGGCAATCGATCGACGAAGTTCACTCGCTCAGGACTGACCTCGC
TCGGCGCCATGAAGACTTGAAATACACACAAGAGGTTCAAACTCTCACTG
AGCAAGACCAAGCCAACGCTGTTCGGCTTTCCCATGAGCAACTGTTAGCT
GACAAACGGAGAGTAGATCTACGCCTTGAGGAAACCGAGGCGAGT GTACT
GAATCGAATTGACCGGGTGGACGAAAATCTAGCTCCAAAGTGTCGGTACA
GGTACGCCGGCAAGTTAAATACTGTTGTATACCGCTGCAACGTTGTTCTG
AACAAAGCGCCGTTGTAAATCAATCGTTCCTCGAGGTTTCTTCGCGCTTT
ATGTCTCTCCAATGATCTGGACAGGAAATCATACAAGATCTCAAGAAAAC
ATGCAAAAACGCGCGCGATCGTGCTCAAGATGCACACGTGTCGCAATGGG
CGGCGGAGGCGAAGCTTTCTGTTCTTGATCGGCGTATCGAAGGAATCGAA
AAGAGGGCACGTATTTTTTTATACGCTTTTTTT GTTTTTTATACCTCTGA
CGCTTACGGGTAAACGGATTTATGTTACAAGCAAGCAGTTAATGAGTTAA
GGAACAGACCTTATCCTTTGCAGGGTGTTTCTACTGTACATGGCGCAGAA
GAGTGCCGGGATGGAATAGGCTAGGTTGCTGTTTGCGATTGGTGTAGGCT
CAAGTACTTTTGCCTTGACCGCCTGGTACAGGTCCGAACACGGGACGAGA
TGTGCTTACGAGCCCGGAAAATTGTTCGTCAGGAGACCGCAGAGACTGGA
GCTGAGTTGGATGCTTTGTCGGCCCAGGTTGAG GTAAGGGGGTGAGAGTC
TACTTCGAAAGCATTCACCGGTGTGACTGCAATGGGGAAATGCCAACAAT
ATCTTACTCAATCACATAGTGCAGCCACTGTCAATATTCCCCCCTCCATC
CCATCCCCGACATGGATCTGCCGTTATTGACTGCGCTACTATCTTTGATA
TGAAAAAGAAACTCAAGCGTGCCATGAAGGACGAGCATTCGTATAGGAAA
GCGGCCGAGCGACGGTGCCGACAAGCTCGAGATACCAGCTCTCGAATCAG
CCGGTACCTCGACAACATACTACGAGTAAACGAGGAACTCGTGATGAGAA
GAACGAAAACATCTATACCGCCGCGCTCGGCGGGACAACGATCCACACCA
ACGCAAGAAAGAGGAGGGCAAGATAAGCCAGAACGAGCCAATGGCCCTAA
AAACAGTCCGTTAGGCCGACGCGAGTGCGGAACCTTAGGGGAACTTCACC
TGGGTGCAGCCGTTGAAGATGCGTTGAGAGCGGGCAGAGCCAGGGGCGAC
CCTATTCCTTTCCTTGAGGCACTTTATGAACGTATCGGTTTCTCTGTGAT
GCAGCGAGAGGGTGAGGCTAGTGGCACCCACAGCCTACCGACAAGCCCCA
GCAGAGACAGAGAGCGAGACAGAGGTAGAGAGAAAGACAGAGAGAGGGCG
AGGTCTCAAGACGAAAGGGAGGGTCCCTACAACGTCAAGATCGTGGTGTC
TGGGGGTGATGATGGGTTCTTCCTGCGTGAAGGCATGGACCGGAATCTGC
TGGCAGGGGCGCAATCCGCGAGCCGACTCAAAGAGACCAAGCGAACGGTA
AGGGGTGAAGATGGAGTTGGGAACAGGATACGGGAAGGGAGAAGCCCGAG
CAAGCCCGGTTATTCGTTTGCGCGTTCGCCCCACAGGAGGGCGGTGTCTA
GCGCAGAGCGGTCGCCCATGATGTTAAGACGGCTGGAAGATTTGGTGACA
CAACTAAAGAGGGAAAGGGTGGACGTCGAACAGGGGTACAAGACTGTGGT
GCAAAGG GTGAGTACCACCGGCGGTCTGCATCACGTTCTAGGATGCAGTC
TTCCTATATTTCGACTTGAATTTACTCTATGATAATATCAGACCTTGTTG
CCTTCTACGCGTTACACGGCGAACCAGCGGCAAACGCGTTAGACTGGCTC
TATCATGCTGCATCGACATGCTTTAAAATGCAGCGGTGCGCAATCCGTAT
TAGCGGCCAGGGCTGGACCCACAGGTCAGCCTGTGTGATACCGTGATCTT
ACTCTCATGGGCCGCCGTGGTCCGTCCACATCGTAGGCCAGCTCTAGTGC
CTACTGGAGTGTGGAGGGCCCGGATTTGAATTTCAGGAACCTCACGAGAG
CCATCGCCTGCCTTCAGGTGAAA back to top Coding sequence (CDS) from alignment at P-canaliculata_contig9773:4633..6855-
>mRNA_P-canaliculata_contig9773.23874.1 ID=mRNA_P-canaliculata_contig9773.23874.1|Name=mRNA_P-canaliculata_contig9773.23874.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2784bp|location=Sequence derived from alignment at P-canaliculata_contig9773:4633..6855- (Pelvetia canaliculata dioecious) back to top