mRNA_P-canaliculata_contig9759.23853.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Properties


Property Name	Value
Hectar predicted targeting category	signal peptide
Exons	3
Model size	434
Cds size	432
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig9759.23853.1	prot_P-canaliculata_contig9759.23853.1	Pelvetia canaliculata dioecious	polypeptide	P-canaliculata_contig9759 996..1532 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817338.843977-UTR-P-canaliculata_contig9759:994..995	1622817338.843977-UTR-P-canaliculata_contig9759:994..995	Pelvetia canaliculata dioecious	UTR	P-canaliculata_contig9759 995..995 +
1693495232.6841943-UTR-P-canaliculata_contig9759:994..995	1693495232.6841943-UTR-P-canaliculata_contig9759:994..995	Pelvetia canaliculata dioecious	UTR	P-canaliculata_contig9759 995..995 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817338.858204-CDS-P-canaliculata_contig9759:995..1082	1622817338.858204-CDS-P-canaliculata_contig9759:995..1082	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig9759 996..1082 +
1693495232.7015903-CDS-P-canaliculata_contig9759:995..1082	1693495232.7015903-CDS-P-canaliculata_contig9759:995..1082	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig9759 996..1082 +
1622817338.8693988-CDS-P-canaliculata_contig9759:1131..1206	1622817338.8693988-CDS-P-canaliculata_contig9759:1131..1206	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig9759 1132..1206 +
1693495232.716202-CDS-P-canaliculata_contig9759:1131..1206	1693495232.716202-CDS-P-canaliculata_contig9759:1131..1206	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig9759 1132..1206 +
1622817338.8805432-CDS-P-canaliculata_contig9759:1262..1532	1622817338.8805432-CDS-P-canaliculata_contig9759:1262..1532	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig9759 1263..1532 +
1693495232.7276897-CDS-P-canaliculata_contig9759:1262..1532	1693495232.7276897-CDS-P-canaliculata_contig9759:1262..1532	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig9759 1263..1532 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-canaliculata_contig9759:995..1532+
coding sequence from alignment at P-canaliculata_contig9759:995..1532+

protein sequence of mRNA_P-canaliculata_contig9759.23853.1

>prot_P-canaliculata_contig9759.23853.1 ID=prot_P-canaliculata_contig9759.23853.1|Name=mRNA_P-canaliculata_contig9759.23853.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=144bp
MKLLALLPILPISAQILSDLQNFGEGVQDALSAGADVVGEIITVITSVGD
GVQTRLETVTVNSEATTTTLTTSVDGSLTTVTSIVSVTETSTATSGEEAS
TVTVTASGNGETGVSTVLVLAGQVVSTANAAQSTETTGDAQSTE

mRNA from alignment at P-canaliculata_contig9759:995..1532+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-canaliculata_contig9759.23853.1 ID=mRNA_P-canaliculata_contig9759.23853.1|Name=mRNA_P-canaliculata_contig9759.23853.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=538bp|location=Sequence derived from alignment at P-canaliculata_contig9759:995..1532+ (Pelvetia canaliculata dioecious)
CATGAAACTCCTCGCTCTCCTCCCCATCCTCCCCATCTCGGCGCAAATCC
TCTCCGACCTCCAAAACTTCGGCGAAGGCGTGCAAGATGTGCGTGTCCCC
CCTCACGCCTGGAGGCGGTACTGACACCATTGACCAGGCCCTCAGCGCCG
GCGCCGATGTGGTCGGCGAAATCATCACCGTCATCACTAGCGTCGGCGAC
GGCGTCCAAACTGTGCGTCCCCTCGTCCGATGACTTCCCACCCGATGGTC
CTTGCTGACGGACCCCAGCGCCTCGAAACCGTGACCGTCAACTCCGAAGC
CACCACCACCACTCTCACCACCTCTGTCGACGGCAGCCTCACCACCGTGA
CCTCCATCGTGAGCGTCACCGAGACCTCGACCGCAACATCCGGCGAGGAG
GCCTCCACCGTGACGGTCACGGCCAGCGGCAACGGCGAGACCGGCGTGTC
GACTGTGCTGGTACTGGCGGGACAGGTGGTGTCGACGGCGAACGCGGCGC
AGAGCACGGAGACGACGGGCGACGCGCAGAGTACGGAG

Coding sequence (CDS) from alignment at P-canaliculata_contig9759:995..1532+

>mRNA_P-canaliculata_contig9759.23853.1 ID=mRNA_P-canaliculata_contig9759.23853.1|Name=mRNA_P-canaliculata_contig9759.23853.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=864bp|location=Sequence derived from alignment at P-canaliculata_contig9759:995..1532+ (Pelvetia canaliculata dioecious)
ATGAAACTCCTCGCTCTCCTCCCCATCCTCCCCATCTCGGCGCAAATCCT
CTCCGACCTCCAAAACTTCGGCGAAGGCGTGCAAGATATGAAACTCCTCG
CTCTCCTCCCCATCCTCCCCATCTCGGCGCAAATCCTCTCCGACCTCCAA
AACTTCGGCGAAGGCGTGCAAGATGCCCTCAGCGCCGGCGCCGATGTGGT
CGGCGAAATCATCACCGTCATCACTAGCGTCGGCGACGGCGTCCAAACTG
CCCTCAGCGCCGGCGCCGATGTGGTCGGCGAAATCATCACCGTCATCACT
AGCGTCGGCGACGGCGTCCAAACTCGCCTCGAAACCGTGACCGTCAACTC
CGAAGCCACCACCACCACTCTCACCACCTCTGTCGACGGCAGCCTCACCA
CCGTGACCTCCATCGTGAGCGTCACCGAGACCTCGACCGCAACATCCGGC
GAGGAGGCCTCCACCGTGACGGTCACGGCCAGCGGCAACGGCGAGACCGG
CGTGTCGACTGTGCTGGTACTGGCGGGACAGGTGGTGTCGACGGCGAACG
CGGCGCAGAGCACGGAGACGACGGGCGACGCGCAGAGTACGGAGCGCCTC
GAAACCGTGACCGTCAACTCCGAAGCCACCACCACCACTCTCACCACCTC
TGTCGACGGCAGCCTCACCACCGTGACCTCCATCGTGAGCGTCACCGAGA
CCTCGACCGCAACATCCGGCGAGGAGGCCTCCACCGTGACGGTCACGGCC
AGCGGCAACGGCGAGACCGGCGTGTCGACTGTGCTGGTACTGGCGGGACA
GGTGGTGTCGACGGCGAACGCGGCGCAGAGCACGGAGACGACGGGCGACG
CGCAGAGTACGGAG

mRNA_P-canaliculata_contig9759.23853.1 (mRNA) Pelvetia canaliculata dioecious

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