Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 3 |
| Model size | 434 |
| Cds size | 432 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817338.843977-UTR-P-canaliculata_contig9759:994..995 | 1622817338.843977-UTR-P-canaliculata_contig9759:994..995 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig9759 995..995 + |
| 1693495232.6841943-UTR-P-canaliculata_contig9759:994..995 | 1693495232.6841943-UTR-P-canaliculata_contig9759:994..995 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig9759 995..995 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817338.858204-CDS-P-canaliculata_contig9759:995..1082 | 1622817338.858204-CDS-P-canaliculata_contig9759:995..1082 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9759 996..1082 + |
| 1693495232.7015903-CDS-P-canaliculata_contig9759:995..1082 | 1693495232.7015903-CDS-P-canaliculata_contig9759:995..1082 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9759 996..1082 + |
| 1622817338.8693988-CDS-P-canaliculata_contig9759:1131..1206 | 1622817338.8693988-CDS-P-canaliculata_contig9759:1131..1206 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9759 1132..1206 + |
| 1693495232.716202-CDS-P-canaliculata_contig9759:1131..1206 | 1693495232.716202-CDS-P-canaliculata_contig9759:1131..1206 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9759 1132..1206 + |
| 1622817338.8805432-CDS-P-canaliculata_contig9759:1262..1532 | 1622817338.8805432-CDS-P-canaliculata_contig9759:1262..1532 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9759 1263..1532 + |
| 1693495232.7276897-CDS-P-canaliculata_contig9759:1262..1532 | 1693495232.7276897-CDS-P-canaliculata_contig9759:1262..1532 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9759 1263..1532 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9759.23853.1 >prot_P-canaliculata_contig9759.23853.1 ID=prot_P-canaliculata_contig9759.23853.1|Name=mRNA_P-canaliculata_contig9759.23853.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=144bp
MKLLALLPILPISAQILSDLQNFGEGVQDALSAGADVVGEIITVITSVGD
GVQTRLETVTVNSEATTTTLTTSVDGSLTTVTSIVSVTETSTATSGEEAS
TVTVTASGNGETGVSTVLVLAGQVVSTANAAQSTETTGDAQSTE back to topmRNA from alignment at P-canaliculata_contig9759:995..1532+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig9759.23853.1 ID=mRNA_P-canaliculata_contig9759.23853.1|Name=mRNA_P-canaliculata_contig9759.23853.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=538bp|location=Sequence derived from alignment at P-canaliculata_contig9759:995..1532+ (Pelvetia canaliculata dioecious)
CATGAAACTCCTCGCTCTCCTCCCCATCCTCCCCATCTCGGCGCAAATCC
TCTCCGACCTCCAAAACTTCGGCGAAGGCGTGCAAGATGTGCGTGTCCCC
CCTCACGCCTGGAGGCGGTACTGACACCATTGACCAGGCCCTCAGCGCCG
GCGCCGATGTGGTCGGCGAAATCATCACCGTCATCACTAGCGTCGGCGAC
GGCGTCCAAACTGTGCGTCCCCTCGTCCGATGACTTCCCACCCGATGGTC
CTTGCTGACGGACCCCAGCGCCTCGAAACCGTGACCGTCAACTCCGAAGC
CACCACCACCACTCTCACCACCTCTGTCGACGGCAGCCTCACCACCGTGA
CCTCCATCGTGAGCGTCACCGAGACCTCGACCGCAACATCCGGCGAGGAG
GCCTCCACCGTGACGGTCACGGCCAGCGGCAACGGCGAGACCGGCGTGTC
GACTGTGCTGGTACTGGCGGGACAGGTGGTGTCGACGGCGAACGCGGCGC
AGAGCACGGAGACGACGGGCGACGCGCAGAGTACGGAG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig9759:995..1532+ >mRNA_P-canaliculata_contig9759.23853.1 ID=mRNA_P-canaliculata_contig9759.23853.1|Name=mRNA_P-canaliculata_contig9759.23853.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=864bp|location=Sequence derived from alignment at P-canaliculata_contig9759:995..1532+ (Pelvetia canaliculata dioecious)
ATGAAACTCCTCGCTCTCCTCCCCATCCTCCCCATCTCGGCGCAAATCCT
CTCCGACCTCCAAAACTTCGGCGAAGGCGTGCAAGATATGAAACTCCTCG
CTCTCCTCCCCATCCTCCCCATCTCGGCGCAAATCCTCTCCGACCTCCAA
AACTTCGGCGAAGGCGTGCAAGATGCCCTCAGCGCCGGCGCCGATGTGGT
CGGCGAAATCATCACCGTCATCACTAGCGTCGGCGACGGCGTCCAAACTG
CCCTCAGCGCCGGCGCCGATGTGGTCGGCGAAATCATCACCGTCATCACT
AGCGTCGGCGACGGCGTCCAAACTCGCCTCGAAACCGTGACCGTCAACTC
CGAAGCCACCACCACCACTCTCACCACCTCTGTCGACGGCAGCCTCACCA
CCGTGACCTCCATCGTGAGCGTCACCGAGACCTCGACCGCAACATCCGGC
GAGGAGGCCTCCACCGTGACGGTCACGGCCAGCGGCAACGGCGAGACCGG
CGTGTCGACTGTGCTGGTACTGGCGGGACAGGTGGTGTCGACGGCGAACG
CGGCGCAGAGCACGGAGACGACGGGCGACGCGCAGAGTACGGAGCGCCTC
GAAACCGTGACCGTCAACTCCGAAGCCACCACCACCACTCTCACCACCTC
TGTCGACGGCAGCCTCACCACCGTGACCTCCATCGTGAGCGTCACCGAGA
CCTCGACCGCAACATCCGGCGAGGAGGCCTCCACCGTGACGGTCACGGCC
AGCGGCAACGGCGAGACCGGCGTGTCGACTGTGCTGGTACTGGCGGGACA
GGTGGTGTCGACGGCGAACGCGGCGCAGAGCACGGAGACGACGGGCGACG
CGCAGAGTACGGAG back to top
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