Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 408 |
| Cds size | 330 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817337.0736217-CDS-P-canaliculata_contig9735:10406..10662 | 1622817337.0736217-CDS-P-canaliculata_contig9735:10406..10662 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9735 10407..10662 - |
| 1693495231.71115-CDS-P-canaliculata_contig9735:10406..10662 | 1693495231.71115-CDS-P-canaliculata_contig9735:10406..10662 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9735 10407..10662 - |
| 1622817337.08775-CDS-P-canaliculata_contig9735:10721..10795 | 1622817337.08775-CDS-P-canaliculata_contig9735:10721..10795 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9735 10722..10795 - |
| 1693495231.7262568-CDS-P-canaliculata_contig9735:10721..10795 | 1693495231.7262568-CDS-P-canaliculata_contig9735:10721..10795 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig9735 10722..10795 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817337.0989065-UTR-P-canaliculata_contig9735:10795..10873 | 1622817337.0989065-UTR-P-canaliculata_contig9735:10795..10873 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig9735 10796..10873 - |
| 1693495231.736046-UTR-P-canaliculata_contig9735:10795..10873 | 1693495231.736046-UTR-P-canaliculata_contig9735:10795..10873 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig9735 10796..10873 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig9735.23822.1 >prot_P-canaliculata_contig9735.23822.1 ID=prot_P-canaliculata_contig9735.23822.1|Name=mRNA_P-canaliculata_contig9735.23822.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=110bp
MTCLPSPEVLPQQMVDAQNPKINASNKNNFARAQNRSPRPKYFWCQADAP
TACSGTVHSLWPEGDISLILTPSRRKKGAYERLGIFHQTARKFQRCADGL
LRHRPFALA* back to topmRNA from alignment at P-canaliculata_contig9735:10407..10873- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig9735.23822.1 ID=mRNA_P-canaliculata_contig9735.23822.1|Name=mRNA_P-canaliculata_contig9735.23822.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=467bp|location=Sequence derived from alignment at P-canaliculata_contig9735:10407..10873- (Pelvetia canaliculata dioecious)
CAATTTCATCCTTCTTGACTTCACCAACACAACACACGAAGTGGACCATG
GCGAAGGCCATTTGCCTCATGGGTGCGGATGACATGTTTACCCTCTCCGG
AAGTCCTTCCTCAACAGATGGTGGACGCCCAGAACCCGAAGATCAACGCC
AGGTACGTCGTACACCGAATGCAATCGTGCCACTCTGCATTGTCCGACTG
ACACACCACAGCAACAAGAACAATTTTGCTCGAGCTCAGAATCGCTCGCC
TCGCCCGAAATACTTCTGGTGCCAAGCAGATGCGCCGACGGCTTGCTCCG
GCACTGTCCATTCGCTCTGGCCTGAGGGAGACATCTCTCTCATTCTTACG
CCGTCCCGCCGGAAGAAGGGGGCGTATGAGAGACTGGGAATTTTCCACCA
AACCGCCCGAAAATTCCAAAGATGCGCCGACGGCTTGCTCCGGCACCGTC
CATTCGCTCTGGCCTGA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig9735:10407..10873- >mRNA_P-canaliculata_contig9735.23822.1 ID=mRNA_P-canaliculata_contig9735.23822.1|Name=mRNA_P-canaliculata_contig9735.23822.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=660bp|location=Sequence derived from alignment at P-canaliculata_contig9735:10407..10873- (Pelvetia canaliculata dioecious)
ATGACATGTTTACCCTCTCCGGAAGTCCTTCCTCAACAGATGGTGGACGC
CCAGAACCCGAAGATCAACGCCAGATGACATGTTTACCCTCTCCGGAAGT
CCTTCCTCAACAGATGGTGGACGCCCAGAACCCGAAGATCAACGCCAGCA
ACAAGAACAATTTTGCTCGAGCTCAGAATCGCTCGCCTCGCCCGAAATAC
TTCTGGTGCCAAGCAGATGCGCCGACGGCTTGCTCCGGCACTGTCCATTC
GCTCTGGCCTGAGGGAGACATCTCTCTCATTCTTACGCCGTCCCGCCGGA
AGAAGGGGGCGTATGAGAGACTGGGAATTTTCCACCAAACCGCCCGAAAA
TTCCAAAGATGCGCCGACGGCTTGCTCCGGCACCGTCCATTCGCTCTGGC
CTGACAACAAGAACAATTTTGCTCGAGCTCAGAATCGCTCGCCTCGCCCG
AAATACTTCTGGTGCCAAGCAGATGCGCCGACGGCTTGCTCCGGCACTGT
CCATTCGCTCTGGCCTGAGGGAGACATCTCTCTCATTCTTACGCCGTCCC
GCCGGAAGAAGGGGGCGTATGAGAGACTGGGAATTTTCCACCAAACCGCC
CGAAAATTCCAAAGATGCGCCGACGGCTTGCTCCGGCACCGTCCATTCGC
TCTGGCCTGA back to top
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