Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 238 |
| Cds size | 234 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817336.867285-UTR-P-canaliculata_contig97318:95..98 | 1622817336.867285-UTR-P-canaliculata_contig97318:95..98 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig97318 96..98 + |
| 1693495231.5333085-UTR-P-canaliculata_contig97318:95..98 | 1693495231.5333085-UTR-P-canaliculata_contig97318:95..98 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig97318 96..98 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817336.8817406-CDS-P-canaliculata_contig97318:98..332 | 1622817336.8817406-CDS-P-canaliculata_contig97318:98..332 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97318 99..332 + |
| 1693495231.5451021-CDS-P-canaliculata_contig97318:98..332 | 1693495231.5451021-CDS-P-canaliculata_contig97318:98..332 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97318 99..332 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97318.23815.1 >prot_P-canaliculata_contig97318.23815.1 ID=prot_P-canaliculata_contig97318.23815.1|Name=mRNA_P-canaliculata_contig97318.23815.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=78bp
MRPPPPGRETITIGDRRRINVECIGTMDVIFHGKSDQRITLIDVAYVPDL
GFNLYSLHAVQRTHLIVSDASGTHIIGA back to topmRNA from alignment at P-canaliculata_contig97318:96..332+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig97318.23815.1 ID=mRNA_P-canaliculata_contig97318.23815.1|Name=mRNA_P-canaliculata_contig97318.23815.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=237bp|location=Sequence derived from alignment at P-canaliculata_contig97318:96..332+ (Pelvetia canaliculata dioecious)
AACATGAGGCCCCCTCCGCCCGGTCGCGAAACCATCACGATCGGGGACCG
TCGGAGAATTAACGTAGAGTGTATCGGGACTATGGATGTCATTTTCCACG
GGAAGAGTGACCAGAGGATTACCTTGATTGATGTCGCATACGTTCCAGAC
CTAGGTTTTAACCTGTACTCGCTGCACGCCGTCCAAAGAACACATCTGAT
AGTGTCGGACGCCTCTGGAACCCACATTATAGGAGCA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig97318:96..332+ >mRNA_P-canaliculata_contig97318.23815.1 ID=mRNA_P-canaliculata_contig97318.23815.1|Name=mRNA_P-canaliculata_contig97318.23815.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=468bp|location=Sequence derived from alignment at P-canaliculata_contig97318:96..332+ (Pelvetia canaliculata dioecious)
ATGAGGCCCCCTCCGCCCGGTCGCGAAACCATCACGATCGGGGACCGTCG
GAGAATTAACGTAGAGTGTATCGGGACTATGGATGTCATTTTCCACGGGA
AGAGTGACCAGAGGATTACCTTGATTGATGTCGCATACGTTCCAGACCTA
GGTTTTAACCTGTACTCGCTGCACGCCGTCCAAAGAACACATCTGATAGT
GTCGGACGCCTCTGGAACCCACATTATAGGAGCAATGAGGCCCCCTCCGC
CCGGTCGCGAAACCATCACGATCGGGGACCGTCGGAGAATTAACGTAGAG
TGTATCGGGACTATGGATGTCATTTTCCACGGGAAGAGTGACCAGAGGAT
TACCTTGATTGATGTCGCATACGTTCCAGACCTAGGTTTTAACCTGTACT
CGCTGCACGCCGTCCAAAGAACACATCTGATAGTGTCGGACGCCTCTGGA
ACCCACATTATAGGAGCA back to top
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