Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 364 |
| Cds size | 330 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817331.4067962-CDS-P-canaliculata_contig97:37350..37680 | 1622817331.4067962-CDS-P-canaliculata_contig97:37350..37680 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97 37351..37680 + |
| 1693495228.698814-CDS-P-canaliculata_contig97:37350..37680 | 1693495228.698814-CDS-P-canaliculata_contig97:37350..37680 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig97 37351..37680 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817331.4196794-UTR-P-canaliculata_contig97:37680..37713 | 1622817331.4196794-UTR-P-canaliculata_contig97:37680..37713 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig97 37681..37713 + |
| 1693495228.7103934-UTR-P-canaliculata_contig97:37680..37713 | 1693495228.7103934-UTR-P-canaliculata_contig97:37680..37713 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig97 37681..37713 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig97.23764.1 >prot_P-canaliculata_contig97.23764.1 ID=prot_P-canaliculata_contig97.23764.1|Name=mRNA_P-canaliculata_contig97.23764.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=110bp
EGRQGQAVRSRATFSVLALPLGQASESDGTGSLPACQVRRVLTQTPRYDH
GLLQDLLGETFATPRSGWSSPMDSLWQCRRWSGRDEPACRAAEPVCTKAP
RSHRSTQLG* back to topmRNA from alignment at P-canaliculata_contig97:37351..37713+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig97.23764.1 ID=mRNA_P-canaliculata_contig97.23764.1|Name=mRNA_P-canaliculata_contig97.23764.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=363bp|location=Sequence derived from alignment at P-canaliculata_contig97:37351..37713+ (Pelvetia canaliculata dioecious)
GAAGGAAGGCAAGGCCAGGCGGTGCGATCAAGAGCCACATTTTCCGTGCT
CGCGCTGCCTCTAGGTCAAGCCTCGGAGTCGGATGGGACTGGCTCACTGC
CAGCCTGCCAGGTCAGACGGGTGTTAACCCAAACGCCCAGATATGACCAT
GGTCTGTTGCAAGATCTTCTGGGCGAGACATTCGCGACGCCCAGGTCTGG
CTGGTCAAGTCCAATGGACAGCTTGTGGCAATGTCGTCGCTGGAGTGGAA
GGGATGAACCTGCATGCAGAGCTGCAGAGCCAGTGTGCACAAAGGCACCC
AGGTCACATCGTTCGACTCAACTCGGCTAAGACTGGGGACCAGGCTGGCT
TATTGTCCAATCC back to topCoding sequence (CDS) from alignment at P-canaliculata_contig97:37351..37713+ >mRNA_P-canaliculata_contig97.23764.1 ID=mRNA_P-canaliculata_contig97.23764.1|Name=mRNA_P-canaliculata_contig97.23764.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=660bp|location=Sequence derived from alignment at P-canaliculata_contig97:37351..37713+ (Pelvetia canaliculata dioecious)
GAAGGAAGGCAAGGCCAGGCGGTGCGATCAAGAGCCACATTTTCCGTGCT
CGCGCTGCCTCTAGGTCAAGCCTCGGAGTCGGATGGGACTGGCTCACTGC
CAGCCTGCCAGGTCAGACGGGTGTTAACCCAAACGCCCAGATATGACCAT
GGTCTGTTGCAAGATCTTCTGGGCGAGACATTCGCGACGCCCAGGTCTGG
CTGGTCAAGTCCAATGGACAGCTTGTGGCAATGTCGTCGCTGGAGTGGAA
GGGATGAACCTGCATGCAGAGCTGCAGAGCCAGTGTGCACAAAGGCACCC
AGGTCACATCGTTCGACTCAACTCGGCTAAGAAGGAAGGCAAGGCCAGGC
GGTGCGATCAAGAGCCACATTTTCCGTGCTCGCGCTGCCTCTAGGTCAAG
CCTCGGAGTCGGATGGGACTGGCTCACTGCCAGCCTGCCAGGTCAGACGG
GTGTTAACCCAAACGCCCAGATATGACCATGGTCTGTTGCAAGATCTTCT
GGGCGAGACATTCGCGACGCCCAGGTCTGGCTGGTCAAGTCCAATGGACA
GCTTGTGGCAATGTCGTCGCTGGAGTGGAAGGGATGAACCTGCATGCAGA
GCTGCAGAGCCAGTGTGCACAAAGGCACCCAGGTCACATCGTTCGACTCA
ACTCGGCTAA back to top
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