Homology
BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match:
A0A1V8U609_9PEZI (Putative V-type proton ATPase 20 kDa proteolipid subunit n=2 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8U609_9PEZI)
HSP 1 Score: 334 bits (857), Expect = 1.350e-114
Identity = 170/199 (85.43%), Postives = 183/199 (91.96%), Query Frame = 1
Query: 79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
MGGL YGSYGA +A ++V LYMLF+GEGEAFNVG F+ES+SPY WAS GI +CIG SVVGAAWGIFITG+SI+GG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSK+S V GDA +SGSNYYTGYALFWSGVLVGMCNL+CGVSVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLS SA +FK
Sbjct: 1 MGGLAYGSYGAGTALLIVGLYMLFNGEGEAFNVGAFIESISPYAWASTGIAMCIGFSVVGAAWGIFITGSSIIGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKLSQVGGDAGYSGSNYYTGYALFWSGVLVGMCNLICGVSVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSGSANDFK 199
BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match:
A0A6H0XXN4_9PEZI (Uncharacterized protein n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0XXN4_9PEZI)
HSP 1 Score: 334 bits (856), Expect = 1.920e-114
Identity = 169/199 (84.92%), Postives = 185/199 (92.96%), Query Frame = 1
Query: 79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
MGGLTY SYGA VVV LYMLF+GEGEAFNVGQF+E++SPY WA++GIGLC+GLSVVGAAWGIFITG+SILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSK+ SV +A+HSGSNY+T +ALFWSG+LVGMCNL+CGVSVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSS+A EFK
Sbjct: 1 MGGLTYASYGAGLGFVVVGLYMLFNGEGEAFNVGQFIEAISPYAWAAVGIGLCMGLSVVGAAWGIFITGSSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKLQSVGAEAIHSGSNYFTAFALFWSGILVGMCNLICGVSVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSAADEFK 199
BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match:
A0A6G1KY43_9PEZI (Uncharacterized protein n=1 Tax=Teratosphaeria nubilosa TaxID=161662 RepID=A0A6G1KY43_9PEZI)
HSP 1 Score: 332 bits (852), Expect = 7.800e-114
Identity = 170/199 (85.43%), Postives = 182/199 (91.46%), Query Frame = 1
Query: 79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
MGGLTYGSYGA +A V+ LYMLF GEGEAFNVG FLES+SPY WAS+GIGLCI LSVVGAAWGIFITGTSILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSS++S+V DA+ SG+NY+TGYALFWSGVLVGMCNLVCG+SVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLS A F+
Sbjct: 1 MGGLTYGSYGAGAAFTVIGLYMLFQGEGEAFNVGAFLESISPYAWASLGIGLCISLSVVGAAWGIFITGTSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSQLSAVSSDAIFSGNNYFTGYALFWSGVLVGMCNLVCGLSVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSGQAGGFQ 199
BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match:
A0A2D3VPU7_9PEZI (Probable vacuolar ATP synthase 22 kDa proteolipid subunit n=1 Tax=Ramularia collo-cygni TaxID=112498 RepID=A0A2D3VPU7_9PEZI)
HSP 1 Score: 331 bits (848), Expect = 3.170e-113
Identity = 164/199 (82.41%), Postives = 182/199 (91.46%), Query Frame = 1
Query: 79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
MGGLTYG+YGA S ++ LYMLF GEGEAFNVG FLES+SPY WAS GIGLCIGLSV+GAAWGIFITGTSILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFS+K++ V G+A+H+ NY+TG+ALFWSG+LVGMCNL+CGVSVGINGSS ALADAADPSLFVK+LVIEIFSSVLGLFGLIIGLLLS +A +FK
Sbjct: 1 MGGLTYGTYGAGSTLAIIGLYMLFQGEGEAFNVGAFLESISPYAWASAGIGLCIGLSVIGAAWGIFITGTSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSAKLTPVSGEAIHAAGNYFTGFALFWSGLLVGMCNLICGVSVGINGSSAALADAADPSLFVKVLVIEIFSSVLGLFGLIIGLLLSGNANDFK 199
BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match:
A0A074XIF2_AURPU (Uncharacterized protein n=3 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A074XIF2_AURPU)
HSP 1 Score: 330 bits (845), Expect = 9.080e-113
Identity = 169/198 (85.35%), Postives = 182/198 (91.92%), Query Frame = 1
Query: 79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEF 672
MGGLTYG+YGAT+A V+ LYMLF+GEGEAFNVG FL S+SP+ WAS GIGLCIGLSVVGAAWGIFITG+SILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFS+K++SV DA SGSNYYTG+ALFWSG+LVG CNLVCGVSVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLS AA+F
Sbjct: 1 MGGLTYGAYGATTALTVIGLYMLFNGEGEAFNVGDFLLSISPHAWASTGIGLCIGLSVVGAAWGIFITGSSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSAKLASVGSDAARSGSNYYTGFALFWSGLLVGACNLVCGVSVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSGPAADF 198
BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match:
T1W057_HORWE (Putative vacuolar (H+)-ATPase subunit c'' isoform A n=7 Tax=Teratosphaeriaceae TaxID=668547 RepID=T1W057_HORWE)
HSP 1 Score: 330 bits (845), Expect = 1.010e-112
Identity = 170/199 (85.43%), Postives = 180/199 (90.45%), Query Frame = 1
Query: 79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
MGGLTYGSYGA A V+ LYMLF GEGEAFN G FLES+SPY WAS GIGLCIGLSVVGAAWGIFITGTSILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSK+S + +AL+SGSNY+TGYALFWSG+LVGMCNLVCGVSVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLS + +F
Sbjct: 1 MGGLTYGSYGAGVALSVIGLYMLFQGEGEAFNPGAFLESISPYAWASTGIGLCIGLSVVGAAWGIFITGTSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKVSQIDPNALYSGSNYFTGYALFWSGLLVGMCNLVCGVSVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSGNGNDFS 199
BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match:
A0A4U0WIG5_9PEZI (Putative V-type proton ATPase 20 kDa proteolipid subunit n=3 Tax=Friedmanniomyces TaxID=329881 RepID=A0A4U0WIG5_9PEZI)
HSP 1 Score: 330 bits (845), Expect = 1.010e-112
Identity = 163/199 (81.91%), Postives = 182/199 (91.46%), Query Frame = 1
Query: 79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
MGGL YG+YGA SA V+ LYMLF GEGEAFNVG F+ES+SPY WAS GIGLCIG SVVGAAWGIFITGTSILGG VKAPRIRTKNL+SI+FCEVVAIYGVI SI+ SSK+++++GDALHSG+NY+TG+A+FWSGVLVGMCNLVCGVSVGINGSS ALADAADPSLFVKIL+IEIFSSVLGLFGLIIGLLLS A +F+
Sbjct: 1 MGGLAYGTYGAGSALTVIGLYMLFQGEGEAFNVGAFIESISPYAWASTGIGLCIGQSVVGAAWGIFITGTSILGGGVKAPRIRTKNLLSIVFCEVVAIYGVITSIILSSKVANINGDALHSGNNYFTGFAIFWSGVLVGMCNLVCGVSVGINGSSAALADAADPSLFVKILIIEIFSSVLGLFGLIIGLLLSGQAGDFE 199
BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match:
A0A074X265_9PEZI (Vacuolar ATP synthase proteolipid subunit n=6 Tax=Aureobasidium TaxID=5579 RepID=A0A074X265_9PEZI)
HSP 1 Score: 329 bits (843), Expect = 1.830e-112
Identity = 171/198 (86.36%), Postives = 180/198 (90.91%), Query Frame = 1
Query: 79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEF 672
MGGLTYG YGATSA VV+ LYMLF+GEGEAFNVG FL S+SP+ WAS GI LCIGLSVVGAAWGIFITG SILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFS+KM+SV DA SGSNYYTG+ALFWSG+LVG CNLVCGVSVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLS AA+F
Sbjct: 1 MGGLTYGYYGATSALVVIGLYMLFNGEGEAFNVGDFLLSISPHAWASTGIALCIGLSVVGAAWGIFITGASILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSAKMASVGPDAARSGSNYYTGFALFWSGLLVGACNLVCGVSVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSGPAADF 198
BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match:
A0A6A6Q752_9PEZI (Uncharacterized protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6Q752_9PEZI)
HSP 1 Score: 327 bits (839), Expect = 7.990e-112
Identity = 168/195 (86.15%), Postives = 180/195 (92.31%), Query Frame = 1
Query: 79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSA 663
MGGLTYGSYGAT+A +VV LYMLF+GEGEAFNVG FLES+SPYTWA++GI LCI LSVVGAAWGIFITGTSILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFS+K+ +V +A+ S NYYTGYALFWSGVLVG CNLVCG+SVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLS SA
Sbjct: 1 MGGLTYGSYGATAAFIVVGLYMLFNGEGEAFNVGAFLESISPYTWATLGISLCITLSVVGAAWGIFITGTSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSAKLEAVGAEAIRSAGNYYTGYALFWSGVLVGGCNLVCGISVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSGSA 195
BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match:
M3ANY6_PSEFD (Uncharacterized protein n=10 Tax=Mycosphaerellaceae TaxID=93133 RepID=M3ANY6_PSEFD)
HSP 1 Score: 327 bits (838), Expect = 1.220e-111
Identity = 167/199 (83.92%), Postives = 181/199 (90.95%), Query Frame = 1
Query: 79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
MGGLTYG+ GA +A VV+ LYMLF GEGEAFNVG FLES+SPY WAS GIGLCIGLSV+GAAWGIFITGTSILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFS+K+ +V G A++S SNY+TGYALFWSG+LVG CNLVCGVSVGINGSS ALADAADPSLFVK+LVIEIFSSVLGLFGLIIGLLLS SA F+
Sbjct: 1 MGGLTYGASGAGTALVVIGLYMLFQGEGEAFNVGAFLESISPYAWASTGIGLCIGLSVIGAAWGIFITGTSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSAKLEAVTGPAIYSASNYFTGYALFWSGLLVGACNLVCGVSVGINGSSAALADAADPSLFVKVLVIEIFSSVLGLFGLIIGLLLSGSANPFE 199
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.35e-114 / Id = 85.43 Expect = 1.92e-114 / Id = 84.92 Expect = 7.80e-114 / Id = 85.43 Expect = 3.17e-113 / Id = 82.41 Expect = 9.08e-113 / Id = 85.35 Expect = 1.01e-112 / Id = 85.43 Expect = 1.01e-112 / Id = 81.91 Expect = 1.83e-112 / Id = 86.36 Expect = 7.99e-112 / Id = 86.15 Expect = 1.22e-111 / Id = 83.92 Sequence A0A1V8U609_9PEZI A0A6H0XXN4_9PEZI A0A6G1KY43_9PEZI A0A2D3VPU7_9PEZI A0A074XIF2_AURPU T1W057_HORWE A0A4U0WIG5_9PEZI A0A074X265_9PEZI A0A6A6Q752_9PEZI M3ANY6_PSEFD
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Fungi
Seed ortholog score 327.8
Seed ortholog evalue 3.6e-87
Seed eggNOG ortholog 1047171.Mycgr3P101277
Preferred name vma16
KEGG ko ko:K03661
KEGG TC 3.A.2.2
KEGG Pathway ko00190,ko01100,ko04142,ko04145,ko04721,ko05110,ko05120,ko05152,ko05323,map00190,map01100,map04142,map04145,map04721,map05110,map05120,map05152,map05323
KEGG Module M00160
GOs GO:0000220,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006873,GO:0006885,GO:0007035,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030003,GO:0030004,GO:0030641,GO:0031090,GO:0031224,GO:0032991,GO:0033176,GO:0033177,GO:0033179,GO:0034220,GO:0036442,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044769,GO:0045851,GO:0046961,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0090662,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098805,GO:0098852,GO:0099131,GO:0099132,GO:1902600
EggNOG free text desc. Belongs to the V-ATPase proteolipid subunit family
EggNOG OGs 1ZXPA@147541,38C5K@33154,3MFCV@451867,3NWGS@4751,3QKFB@4890,COG0636@1,KOG0233@2759
COG Functional cat. P
Best tax level Dothideomycetidae
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002
Hectar predicted targeting category signal peptide
Exons 5
Model size 678
Cds size 600
Stop 1
Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815592.189155-UTR-P-canaliculata_contig102:11725..11803 1622815592.189155-UTR-P-canaliculata_contig102:11725..11803 Pelvetia canaliculata dioecious UTR P-canaliculata_contig102 11726..11803 +
1693494154.9054484-UTR-P-canaliculata_contig102:11725..11803 1693494154.9054484-UTR-P-canaliculata_contig102:11725..11803 Pelvetia canaliculata dioecious UTR P-canaliculata_contig102 11726..11803 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815592.2000175-CDS-P-canaliculata_contig102:11803..11864 1622815592.2000175-CDS-P-canaliculata_contig102:11803..11864 Pelvetia canaliculata dioecious CDS P-canaliculata_contig102 11804..11864 +
1693494154.920113-CDS-P-canaliculata_contig102:11803..11864 1693494154.920113-CDS-P-canaliculata_contig102:11803..11864 Pelvetia canaliculata dioecious CDS P-canaliculata_contig102 11804..11864 +
1622815592.2134209-CDS-P-canaliculata_contig102:11923..11958 1622815592.2134209-CDS-P-canaliculata_contig102:11923..11958 Pelvetia canaliculata dioecious CDS P-canaliculata_contig102 11924..11958 +
1693494154.9281752-CDS-P-canaliculata_contig102:11923..11958 1693494154.9281752-CDS-P-canaliculata_contig102:11923..11958 Pelvetia canaliculata dioecious CDS P-canaliculata_contig102 11924..11958 +
1622815592.2232494-CDS-P-canaliculata_contig102:12016..12108 1622815592.2232494-CDS-P-canaliculata_contig102:12016..12108 Pelvetia canaliculata dioecious CDS P-canaliculata_contig102 12017..12108 +
1693494154.9370573-CDS-P-canaliculata_contig102:12016..12108 1693494154.9370573-CDS-P-canaliculata_contig102:12016..12108 Pelvetia canaliculata dioecious CDS P-canaliculata_contig102 12017..12108 +
1622815592.2348838-CDS-P-canaliculata_contig102:12162..12471 1622815592.2348838-CDS-P-canaliculata_contig102:12162..12471 Pelvetia canaliculata dioecious CDS P-canaliculata_contig102 12163..12471 +
1693494154.9482477-CDS-P-canaliculata_contig102:12162..12471 1693494154.9482477-CDS-P-canaliculata_contig102:12162..12471 Pelvetia canaliculata dioecious CDS P-canaliculata_contig102 12163..12471 +
1622815592.245355-CDS-P-canaliculata_contig102:12524..12627 1622815592.245355-CDS-P-canaliculata_contig102:12524..12627 Pelvetia canaliculata dioecious CDS P-canaliculata_contig102 12525..12627 +
1693494154.9619515-CDS-P-canaliculata_contig102:12524..12627 1693494154.9619515-CDS-P-canaliculata_contig102:12524..12627 Pelvetia canaliculata dioecious CDS P-canaliculata_contig102 12525..12627 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig102.295.1
>prot_P-canaliculata_contig102.295.1 ID=prot_P-canaliculata_contig102.295.1|Name=mRNA_P-canaliculata_contig102.295.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=200bp
MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGI GLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYG VIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVG INGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK* back to top mRNA from alignment at P-canaliculata_contig102:11726..12627+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig102.295.1 ID=mRNA_P-canaliculata_contig102.295.1|Name=mRNA_P-canaliculata_contig102.295.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=902bp|location=Sequence derived from alignment at P-canaliculata_contig102:11726..12627+ (Pelvetia canaliculata dioecious)CTCTCGCATAACAGCATCGCATCTAGAGCAGCGCGCTTACTGCTCAATCT
TGACTGCTAATAATATCGCTCTCACACC ATGGGGGGATTGACTTACGGTA
GCTATGGCGCTACCTCTGCCACCGTCGTTGTTGCGCTAT GTAAGTCGCTA
CCAGGTGGCTACATTGGTCGCCTAGCCTAAAGCTCACGGCGACTTCAGAC
ATGCTGTTCCATGGCGAAGGCGAAGCTTTCAAC GTACGATCCCACTTTCG
AACAGCATATGCGGAGGACAGCAGCCTCACACTAGCGACAGGTCGGACAA
TTCCTCGAATCGGTATCTCCCTACACCTGGGCCTCGATGGGCATTGGCCT
CTGCATAGGTCTATCAGTCGTGGGAGCAGCTTG GTTGGTAACACTGGAGG
AGCCTTGAGATGGGAAGAGTGAGCTAAGGCAATACAGGGGCATCTTCATC
ACCGGGACCTCTATACTCGGAGGAGCAGTCAAGGCCCCACGCATCCGGAC
CAAGAATTTGATATCCATCATTTTCTGCGAGGTCGTGGCTATCTACGGCG
TCATCATGTCGATTGTGTTCTCATCCAAGATGTCTTCGGTCCATGGTGAT
GCCCTCCACAGCGGCAGCAACTACTATACTGGATATGCTCTGTTCTGGTC
CGGCGTGCTGGTCGGGATGTGCAACCTGGTCTGTGGTGTCAGTGTCGGAA
TCAATGGTTCAAGCACTGCCCTTGCAGACGCTGCAGACCCGAGTCT GTAA
GTATCAAAACGGCGGTTTTCACGACAGTGCAAGGCTGACCTCACCACAGT
TTCGTTAAGATTCTGGTCATTGAGATCTTCTCCTCCGTGCTGGGGCTATT
CGGCCTGATCATTGGGCTTTTACTCAGTTCAAGCGCGGCTGAATTCAAAT
GA back to top Coding sequence (CDS) from alignment at P-canaliculata_contig102:11726..12627+
>mRNA_P-canaliculata_contig102.295.1 ID=mRNA_P-canaliculata_contig102.295.1|Name=mRNA_P-canaliculata_contig102.295.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1200bp|location=Sequence derived from alignment at P-canaliculata_contig102:11726..12627+ (Pelvetia canaliculata dioecious) ATGGGGGGATTGACTTACGGTAGCTATGGCGCTACCTCTGCCACCGTCGT TGTTGCGCTATATGGGGGGATTGACTTACGGTAGCTATGGCGCTACCTCT GCCACCGTCGTTGTTGCGCTATACATGCTGTTCCATGGCGAAGGCGAAGC TTTCAACACATGCTGTTCCATGGCGAAGGCGAAGCTTTCAACGTCGGACA ATTCCTCGAATCGGTATCTCCCTACACCTGGGCCTCGATGGGCATTGGCC TCTGCATAGGTCTATCAGTCGTGGGAGCAGCTTGGTCGGACAATTCCTCG AATCGGTATCTCCCTACACCTGGGCCTCGATGGGCATTGGCCTCTGCATA GGTCTATCAGTCGTGGGAGCAGCTTGGGGCATCTTCATCACCGGGACCTC TATACTCGGAGGAGCAGTCAAGGCCCCACGCATCCGGACCAAGAATTTGA TATCCATCATTTTCTGCGAGGTCGTGGCTATCTACGGCGTCATCATGTCG ATTGTGTTCTCATCCAAGATGTCTTCGGTCCATGGTGATGCCCTCCACAG CGGCAGCAACTACTATACTGGATATGCTCTGTTCTGGTCCGGCGTGCTGG TCGGGATGTGCAACCTGGTCTGTGGTGTCAGTGTCGGAATCAATGGTTCA AGCACTGCCCTTGCAGACGCTGCAGACCCGAGTCTGGGCATCTTCATCAC CGGGACCTCTATACTCGGAGGAGCAGTCAAGGCCCCACGCATCCGGACCA AGAATTTGATATCCATCATTTTCTGCGAGGTCGTGGCTATCTACGGCGTC ATCATGTCGATTGTGTTCTCATCCAAGATGTCTTCGGTCCATGGTGATGC CCTCCACAGCGGCAGCAACTACTATACTGGATATGCTCTGTTCTGGTCCG GCGTGCTGGTCGGGATGTGCAACCTGGTCTGTGGTGTCAGTGTCGGAATC AATGGTTCAAGCACTGCCCTTGCAGACGCTGCAGACCCGAGTCTTTTCGT TAAGATTCTGGTCATTGAGATCTTCTCCTCCGTGCTGGGGCTATTCGGCC TGATCATTGGGCTTTTACTCAGTTCAAGCGCGGCTGAATTCAAATGATTT CGTTAAGATTCTGGTCATTGAGATCTTCTCCTCCGTGCTGGGGCTATTCG GCCTGATCATTGGGCTTTTACTCAGTTCAAGCGCGGCTGAATTCAAATGA back to top