mRNA_P-canaliculata_contig102.295.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig102.295.1
Unique NamemRNA_P-canaliculata_contig102.295.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
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BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match: A0A1V8U609_9PEZI (Putative V-type proton ATPase 20 kDa proteolipid subunit n=2 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8U609_9PEZI)

HSP 1 Score: 334 bits (857), Expect = 1.350e-114
Identity = 170/199 (85.43%), Postives = 183/199 (91.96%), Query Frame = 1 
Query:   79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
            MGGL YGSYGA +A ++V LYMLF+GEGEAFNVG F+ES+SPY WAS GI +CIG SVVGAAWGIFITG+SI+GG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSK+S V GDA +SGSNYYTGYALFWSGVLVGMCNL+CGVSVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLS SA +FK
Sbjct:    1 MGGLAYGSYGAGTALLIVGLYMLFNGEGEAFNVGAFIESISPYAWASTGIAMCIGFSVVGAAWGIFITGSSIIGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKLSQVGGDAGYSGSNYYTGYALFWSGVLVGMCNLICGVSVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSGSANDFK 199
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BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match: A0A6H0XXN4_9PEZI (Uncharacterized protein n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0XXN4_9PEZI)

HSP 1 Score: 334 bits (856), Expect = 1.920e-114
Identity = 169/199 (84.92%), Postives = 185/199 (92.96%), Query Frame = 1 
Query:   79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
            MGGLTY SYGA    VVV LYMLF+GEGEAFNVGQF+E++SPY WA++GIGLC+GLSVVGAAWGIFITG+SILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSK+ SV  +A+HSGSNY+T +ALFWSG+LVGMCNL+CGVSVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSS+A EFK
Sbjct:    1 MGGLTYASYGAGLGFVVVGLYMLFNGEGEAFNVGQFIEAISPYAWAAVGIGLCMGLSVVGAAWGIFITGSSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKLQSVGAEAIHSGSNYFTAFALFWSGILVGMCNLICGVSVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSAADEFK 199
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BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match: A0A6G1KY43_9PEZI (Uncharacterized protein n=1 Tax=Teratosphaeria nubilosa TaxID=161662 RepID=A0A6G1KY43_9PEZI)

HSP 1 Score: 332 bits (852), Expect = 7.800e-114
Identity = 170/199 (85.43%), Postives = 182/199 (91.46%), Query Frame = 1 
Query:   79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
            MGGLTYGSYGA +A  V+ LYMLF GEGEAFNVG FLES+SPY WAS+GIGLCI LSVVGAAWGIFITGTSILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSS++S+V  DA+ SG+NY+TGYALFWSGVLVGMCNLVCG+SVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLS  A  F+
Sbjct:    1 MGGLTYGSYGAGAAFTVIGLYMLFQGEGEAFNVGAFLESISPYAWASLGIGLCISLSVVGAAWGIFITGTSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSQLSAVSSDAIFSGNNYFTGYALFWSGVLVGMCNLVCGLSVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSGQAGGFQ 199
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BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match: A0A2D3VPU7_9PEZI (Probable vacuolar ATP synthase 22 kDa proteolipid subunit n=1 Tax=Ramularia collo-cygni TaxID=112498 RepID=A0A2D3VPU7_9PEZI)

HSP 1 Score: 331 bits (848), Expect = 3.170e-113
Identity = 164/199 (82.41%), Postives = 182/199 (91.46%), Query Frame = 1 
Query:   79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
            MGGLTYG+YGA S   ++ LYMLF GEGEAFNVG FLES+SPY WAS GIGLCIGLSV+GAAWGIFITGTSILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFS+K++ V G+A+H+  NY+TG+ALFWSG+LVGMCNL+CGVSVGINGSS ALADAADPSLFVK+LVIEIFSSVLGLFGLIIGLLLS +A +FK
Sbjct:    1 MGGLTYGTYGAGSTLAIIGLYMLFQGEGEAFNVGAFLESISPYAWASAGIGLCIGLSVIGAAWGIFITGTSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSAKLTPVSGEAIHAAGNYFTGFALFWSGLLVGMCNLICGVSVGINGSSAALADAADPSLFVKVLVIEIFSSVLGLFGLIIGLLLSGNANDFK 199
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BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match: A0A074XIF2_AURPU (Uncharacterized protein n=3 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A074XIF2_AURPU)

HSP 1 Score: 330 bits (845), Expect = 9.080e-113
Identity = 169/198 (85.35%), Postives = 182/198 (91.92%), Query Frame = 1 
Query:   79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEF 672
            MGGLTYG+YGAT+A  V+ LYMLF+GEGEAFNVG FL S+SP+ WAS GIGLCIGLSVVGAAWGIFITG+SILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFS+K++SV  DA  SGSNYYTG+ALFWSG+LVG CNLVCGVSVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLS  AA+F
Sbjct:    1 MGGLTYGAYGATTALTVIGLYMLFNGEGEAFNVGDFLLSISPHAWASTGIGLCIGLSVVGAAWGIFITGSSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSAKLASVGSDAARSGSNYYTGFALFWSGLLVGACNLVCGVSVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSGPAADF 198
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BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match: T1W057_HORWE (Putative vacuolar (H+)-ATPase subunit c'' isoform A n=7 Tax=Teratosphaeriaceae TaxID=668547 RepID=T1W057_HORWE)

HSP 1 Score: 330 bits (845), Expect = 1.010e-112
Identity = 170/199 (85.43%), Postives = 180/199 (90.45%), Query Frame = 1 
Query:   79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
            MGGLTYGSYGA  A  V+ LYMLF GEGEAFN G FLES+SPY WAS GIGLCIGLSVVGAAWGIFITGTSILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSK+S +  +AL+SGSNY+TGYALFWSG+LVGMCNLVCGVSVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLS +  +F 
Sbjct:    1 MGGLTYGSYGAGVALSVIGLYMLFQGEGEAFNPGAFLESISPYAWASTGIGLCIGLSVVGAAWGIFITGTSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKVSQIDPNALYSGSNYFTGYALFWSGLLVGMCNLVCGVSVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSGNGNDFS 199
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BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match: A0A4U0WIG5_9PEZI (Putative V-type proton ATPase 20 kDa proteolipid subunit n=3 Tax=Friedmanniomyces TaxID=329881 RepID=A0A4U0WIG5_9PEZI)

HSP 1 Score: 330 bits (845), Expect = 1.010e-112
Identity = 163/199 (81.91%), Postives = 182/199 (91.46%), Query Frame = 1 
Query:   79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
            MGGL YG+YGA SA  V+ LYMLF GEGEAFNVG F+ES+SPY WAS GIGLCIG SVVGAAWGIFITGTSILGG VKAPRIRTKNL+SI+FCEVVAIYGVI SI+ SSK+++++GDALHSG+NY+TG+A+FWSGVLVGMCNLVCGVSVGINGSS ALADAADPSLFVKIL+IEIFSSVLGLFGLIIGLLLS  A +F+
Sbjct:    1 MGGLAYGTYGAGSALTVIGLYMLFQGEGEAFNVGAFIESISPYAWASTGIGLCIGQSVVGAAWGIFITGTSILGGGVKAPRIRTKNLLSIVFCEVVAIYGVITSIILSSKVANINGDALHSGNNYFTGFAIFWSGVLVGMCNLVCGVSVGINGSSAALADAADPSLFVKILIIEIFSSVLGLFGLIIGLLLSGQAGDFE 199
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BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match: A0A074X265_9PEZI (Vacuolar ATP synthase proteolipid subunit n=6 Tax=Aureobasidium TaxID=5579 RepID=A0A074X265_9PEZI)

HSP 1 Score: 329 bits (843), Expect = 1.830e-112
Identity = 171/198 (86.36%), Postives = 180/198 (90.91%), Query Frame = 1 
Query:   79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEF 672
            MGGLTYG YGATSA VV+ LYMLF+GEGEAFNVG FL S+SP+ WAS GI LCIGLSVVGAAWGIFITG SILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFS+KM+SV  DA  SGSNYYTG+ALFWSG+LVG CNLVCGVSVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLS  AA+F
Sbjct:    1 MGGLTYGYYGATSALVVIGLYMLFNGEGEAFNVGDFLLSISPHAWASTGIALCIGLSVVGAAWGIFITGASILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSAKMASVGPDAARSGSNYYTGFALFWSGLLVGACNLVCGVSVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSGPAADF 198
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BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match: A0A6A6Q752_9PEZI (Uncharacterized protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6Q752_9PEZI)

HSP 1 Score: 327 bits (839), Expect = 7.990e-112
Identity = 168/195 (86.15%), Postives = 180/195 (92.31%), Query Frame = 1 
Query:   79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSA 663
            MGGLTYGSYGAT+A +VV LYMLF+GEGEAFNVG FLES+SPYTWA++GI LCI LSVVGAAWGIFITGTSILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFS+K+ +V  +A+ S  NYYTGYALFWSGVLVG CNLVCG+SVGINGSS ALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLS SA
Sbjct:    1 MGGLTYGSYGATAAFIVVGLYMLFNGEGEAFNVGAFLESISPYTWATLGISLCITLSVVGAAWGIFITGTSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSAKLEAVGAEAIRSAGNYYTGYALFWSGVLVGGCNLVCGISVGINGSSAALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSGSA 195
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BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Match: M3ANY6_PSEFD (Uncharacterized protein n=10 Tax=Mycosphaerellaceae TaxID=93133 RepID=M3ANY6_PSEFD)

HSP 1 Score: 327 bits (838), Expect = 1.220e-111
Identity = 167/199 (83.92%), Postives = 181/199 (90.95%), Query Frame = 1 
Query:   79 MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGIGLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVGINGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK 675
            MGGLTYG+ GA +A VV+ LYMLF GEGEAFNVG FLES+SPY WAS GIGLCIGLSV+GAAWGIFITGTSILGG VKAPRIRTKNLISIIFCEVVAIYGVIMSIVFS+K+ +V G A++S SNY+TGYALFWSG+LVG CNLVCGVSVGINGSS ALADAADPSLFVK+LVIEIFSSVLGLFGLIIGLLLS SA  F+
Sbjct:    1 MGGLTYGASGAGTALVVIGLYMLFQGEGEAFNVGAFLESISPYAWASTGIGLCIGLSVIGAAWGIFITGTSILGGGVKAPRIRTKNLISIIFCEVVAIYGVIMSIVFSAKLEAVTGPAIYSASNYFTGYALFWSGLLVGACNLVCGVSVGINGSSAALADAADPSLFVKVLVIEIFSSVLGLFGLIIGLLLSGSANPFE 199
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102.295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V8U609_9PEZI1.350e-11485.43Putative V-type proton ATPase 20 kDa proteolipid s... [more]
A0A6H0XXN4_9PEZI1.920e-11484.92Uncharacterized protein n=1 Tax=Peltaster fructico... [more]
A0A6G1KY43_9PEZI7.800e-11485.43Uncharacterized protein n=1 Tax=Teratosphaeria nub... [more]
A0A2D3VPU7_9PEZI3.170e-11382.41Probable vacuolar ATP synthase 22 kDa proteolipid ... [more]
A0A074XIF2_AURPU9.080e-11385.35Uncharacterized protein n=3 Tax=Aureobasidium pull... [more]
T1W057_HORWE1.010e-11285.43Putative vacuolar (H+)-ATPase subunit c'' isoform ... [more]
A0A4U0WIG5_9PEZI1.010e-11281.91Putative V-type proton ATPase 20 kDa proteolipid s... [more]
A0A074X265_9PEZI1.830e-11286.36Vacuolar ATP synthase proteolipid subunit n=6 Tax=... [more]
A0A6A6Q752_9PEZI7.990e-11286.15Uncharacterized protein n=1 Tax=Neohortaea acidoph... [more]
M3ANY6_PSEFD1.220e-11183.92Uncharacterized protein n=10 Tax=Mycosphaerellacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig102contigP-canaliculata_contig102:11726..12627 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score327.8
Seed ortholog evalue3.6e-87
Seed eggNOG ortholog1047171.Mycgr3P101277
Preferred namevma16
KEGG koko:K03661
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04142,ko04145,ko04721,ko05110,ko05120,ko05152,ko05323,map00190,map01100,map04142,map04145,map04721,map05110,map05120,map05152,map05323
KEGG ModuleM00160
GOsGO:0000220,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006873,GO:0006885,GO:0007035,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030003,GO:0030004,GO:0030641,GO:0031090,GO:0031224,GO:0032991,GO:0033176,GO:0033177,GO:0033179,GO:0034220,GO:0036442,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044769,GO:0045851,GO:0046961,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0090662,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098805,GO:0098852,GO:0099131,GO:0099132,GO:1902600
EggNOG free text desc.Belongs to the V-ATPase proteolipid subunit family
EggNOG OGs1ZXPA@147541,38C5K@33154,3MFCV@451867,3NWGS@4751,3QKFB@4890,COG0636@1,KOG0233@2759
COG Functional cat.P
Best tax levelDothideomycetidae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Hectar predicted targeting categorysignal peptide
Exons5
Model size678
Cds size600
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig102.295.1prot_P-canaliculata_contig102.295.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig102 11804..12627 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815592.189155-UTR-P-canaliculata_contig102:11725..118031622815592.189155-UTR-P-canaliculata_contig102:11725..11803Pelvetia canaliculata dioeciousUTRP-canaliculata_contig102 11726..11803 +
1693494154.9054484-UTR-P-canaliculata_contig102:11725..118031693494154.9054484-UTR-P-canaliculata_contig102:11725..11803Pelvetia canaliculata dioeciousUTRP-canaliculata_contig102 11726..11803 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815592.2000175-CDS-P-canaliculata_contig102:11803..118641622815592.2000175-CDS-P-canaliculata_contig102:11803..11864Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102 11804..11864 +
1693494154.920113-CDS-P-canaliculata_contig102:11803..118641693494154.920113-CDS-P-canaliculata_contig102:11803..11864Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102 11804..11864 +
1622815592.2134209-CDS-P-canaliculata_contig102:11923..119581622815592.2134209-CDS-P-canaliculata_contig102:11923..11958Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102 11924..11958 +
1693494154.9281752-CDS-P-canaliculata_contig102:11923..119581693494154.9281752-CDS-P-canaliculata_contig102:11923..11958Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102 11924..11958 +
1622815592.2232494-CDS-P-canaliculata_contig102:12016..121081622815592.2232494-CDS-P-canaliculata_contig102:12016..12108Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102 12017..12108 +
1693494154.9370573-CDS-P-canaliculata_contig102:12016..121081693494154.9370573-CDS-P-canaliculata_contig102:12016..12108Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102 12017..12108 +
1622815592.2348838-CDS-P-canaliculata_contig102:12162..124711622815592.2348838-CDS-P-canaliculata_contig102:12162..12471Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102 12163..12471 +
1693494154.9482477-CDS-P-canaliculata_contig102:12162..124711693494154.9482477-CDS-P-canaliculata_contig102:12162..12471Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102 12163..12471 +
1622815592.245355-CDS-P-canaliculata_contig102:12524..126271622815592.245355-CDS-P-canaliculata_contig102:12524..12627Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102 12525..12627 +
1693494154.9619515-CDS-P-canaliculata_contig102:12524..126271693494154.9619515-CDS-P-canaliculata_contig102:12524..12627Pelvetia canaliculata dioeciousCDSP-canaliculata_contig102 12525..12627 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig102.295.1

>prot_P-canaliculata_contig102.295.1 ID=prot_P-canaliculata_contig102.295.1|Name=mRNA_P-canaliculata_contig102.295.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=200bp
MGGLTYGSYGATSATVVVALYMLFHGEGEAFNVGQFLESVSPYTWASMGI
GLCIGLSVVGAAWGIFITGTSILGGAVKAPRIRTKNLISIIFCEVVAIYG
VIMSIVFSSKMSSVHGDALHSGSNYYTGYALFWSGVLVGMCNLVCGVSVG
INGSSTALADAADPSLFVKILVIEIFSSVLGLFGLIIGLLLSSSAAEFK*
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mRNA from alignment at P-canaliculata_contig102:11726..12627+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig102.295.1 ID=mRNA_P-canaliculata_contig102.295.1|Name=mRNA_P-canaliculata_contig102.295.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=902bp|location=Sequence derived from alignment at P-canaliculata_contig102:11726..12627+ (Pelvetia canaliculata dioecious)
CTCTCGCATAACAGCATCGCATCTAGAGCAGCGCGCTTACTGCTCAATCT
TGACTGCTAATAATATCGCTCTCACACCATGGGGGGATTGACTTACGGTA
GCTATGGCGCTACCTCTGCCACCGTCGTTGTTGCGCTATGTAAGTCGCTA
CCAGGTGGCTACATTGGTCGCCTAGCCTAAAGCTCACGGCGACTTCAGAC
ATGCTGTTCCATGGCGAAGGCGAAGCTTTCAACGTACGATCCCACTTTCG
AACAGCATATGCGGAGGACAGCAGCCTCACACTAGCGACAGGTCGGACAA
TTCCTCGAATCGGTATCTCCCTACACCTGGGCCTCGATGGGCATTGGCCT
CTGCATAGGTCTATCAGTCGTGGGAGCAGCTTGGTTGGTAACACTGGAGG
AGCCTTGAGATGGGAAGAGTGAGCTAAGGCAATACAGGGGCATCTTCATC
ACCGGGACCTCTATACTCGGAGGAGCAGTCAAGGCCCCACGCATCCGGAC
CAAGAATTTGATATCCATCATTTTCTGCGAGGTCGTGGCTATCTACGGCG
TCATCATGTCGATTGTGTTCTCATCCAAGATGTCTTCGGTCCATGGTGAT
GCCCTCCACAGCGGCAGCAACTACTATACTGGATATGCTCTGTTCTGGTC
CGGCGTGCTGGTCGGGATGTGCAACCTGGTCTGTGGTGTCAGTGTCGGAA
TCAATGGTTCAAGCACTGCCCTTGCAGACGCTGCAGACCCGAGTCTGTAA
GTATCAAAACGGCGGTTTTCACGACAGTGCAAGGCTGACCTCACCACAGT
TTCGTTAAGATTCTGGTCATTGAGATCTTCTCCTCCGTGCTGGGGCTATT
CGGCCTGATCATTGGGCTTTTACTCAGTTCAAGCGCGGCTGAATTCAAAT
GA
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Coding sequence (CDS) from alignment at P-canaliculata_contig102:11726..12627+

>mRNA_P-canaliculata_contig102.295.1 ID=mRNA_P-canaliculata_contig102.295.1|Name=mRNA_P-canaliculata_contig102.295.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1200bp|location=Sequence derived from alignment at P-canaliculata_contig102:11726..12627+ (Pelvetia canaliculata dioecious)
ATGGGGGGATTGACTTACGGTAGCTATGGCGCTACCTCTGCCACCGTCGT
TGTTGCGCTATATGGGGGGATTGACTTACGGTAGCTATGGCGCTACCTCT
GCCACCGTCGTTGTTGCGCTATACATGCTGTTCCATGGCGAAGGCGAAGC
TTTCAACACATGCTGTTCCATGGCGAAGGCGAAGCTTTCAACGTCGGACA
ATTCCTCGAATCGGTATCTCCCTACACCTGGGCCTCGATGGGCATTGGCC
TCTGCATAGGTCTATCAGTCGTGGGAGCAGCTTGGTCGGACAATTCCTCG
AATCGGTATCTCCCTACACCTGGGCCTCGATGGGCATTGGCCTCTGCATA
GGTCTATCAGTCGTGGGAGCAGCTTGGGGCATCTTCATCACCGGGACCTC
TATACTCGGAGGAGCAGTCAAGGCCCCACGCATCCGGACCAAGAATTTGA
TATCCATCATTTTCTGCGAGGTCGTGGCTATCTACGGCGTCATCATGTCG
ATTGTGTTCTCATCCAAGATGTCTTCGGTCCATGGTGATGCCCTCCACAG
CGGCAGCAACTACTATACTGGATATGCTCTGTTCTGGTCCGGCGTGCTGG
TCGGGATGTGCAACCTGGTCTGTGGTGTCAGTGTCGGAATCAATGGTTCA
AGCACTGCCCTTGCAGACGCTGCAGACCCGAGTCTGGGCATCTTCATCAC
CGGGACCTCTATACTCGGAGGAGCAGTCAAGGCCCCACGCATCCGGACCA
AGAATTTGATATCCATCATTTTCTGCGAGGTCGTGGCTATCTACGGCGTC
ATCATGTCGATTGTGTTCTCATCCAAGATGTCTTCGGTCCATGGTGATGC
CCTCCACAGCGGCAGCAACTACTATACTGGATATGCTCTGTTCTGGTCCG
GCGTGCTGGTCGGGATGTGCAACCTGGTCTGTGGTGTCAGTGTCGGAATC
AATGGTTCAAGCACTGCCCTTGCAGACGCTGCAGACCCGAGTCTTTTCGT
TAAGATTCTGGTCATTGAGATCTTCTCCTCCGTGCTGGGGCTATTCGGCC
TGATCATTGGGCTTTTACTCAGTTCAAGCGCGGCTGAATTCAAATGATTT
CGTTAAGATTCTGGTCATTGAGATCTTCTCCTCCGTGCTGGGGCTATTCG
GCCTGATCATTGGGCTTTTACTCAGTTCAAGCGCGGCTGAATTCAAATGA
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