Homology
BLAST of mRNA_P-canaliculata_contig101640.254.1 vs. uniprot
Match:
UPI00058D053C (hypothetical protein n=1 Tax=Psychroserpens damuponensis TaxID=943936 RepID=UPI00058D053C)
HSP 1 Score: 58.2 bits (139), Expect = 6.550e-8
Identity = 66/79 (83.54%), Postives = 74/79 (93.67%), Query Frame = 1
Query: 1 MKKLILNIVFVVALLVSVSSCRDTKEGADNAADSIGNAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVDAVKEGA 237
MKKLILNI +AL+VSV+SCR+TKEGA+NAAD+I NA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG+D+VKEGA
Sbjct: 1 MKKLILNIALALALVVSVTSCRETKEGAENAADAIENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIDSVKEGA 79
BLAST of mRNA_P-canaliculata_contig101640.254.1 vs. uniprot
Match:
UPI001F506EE0 (hypothetical protein n=1 Tax=Arcticiflavibacter luteus TaxID=1434066 RepID=UPI001F506EE0)
HSP 1 Score: 56.6 bits (135), Expect = 2.510e-7
Identity = 28/39 (71.79%), Postives = 35/39 (89.74%), Query Frame = 1
Query: 1 MKKLILNIVFVVALLVSVSSCRDTKEGADNAADSIGNAV 117
MKKLILNI V+AL+VSV+SCR+TKEGA+NAAD++ NA
Sbjct: 1 MKKLILNIALVLALVVSVTSCRETKEGAENAADALENAA 39
BLAST of mRNA_P-canaliculata_contig101640.254.1 vs. uniprot
Match:
UPI000478D4D8 (hypothetical protein n=1 Tax=Sediminibacter sp. Hel_I_10 TaxID=1392490 RepID=UPI000478D4D8)
HSP 1 Score: 53.9 bits (128), Expect = 7.270e-7
Identity = 26/38 (68.42%), Postives = 33/38 (86.84%), Query Frame = 1
Query: 1 MKKLILNIVFVVALLVSVSSCRDTKEGADNAADSIGNA 114
MKK ILN+ +AL+VSVSSCR+TKEGADNAAD++ N+
Sbjct: 1 MKKPILNLALAIALVVSVSSCRETKEGADNAADAVENS 38
BLAST of mRNA_P-canaliculata_contig101640.254.1 vs. uniprot
Match:
UPI001E48C850 (hypothetical protein n=1 Tax=Psychroserpens sp. XSD401 TaxID=2855840 RepID=UPI001E48C850)
HSP 1 Score: 54.3 bits (129), Expect = 1.360e-6
Identity = 27/38 (71.05%), Postives = 34/38 (89.47%), Query Frame = 1
Query: 1 MKKLILNIVFVVALLVSVSSCRDTKEGADNAADSIGNA 114
MKKLILNI V+AL+VSV+SCR+TKEGA++AAD + NA
Sbjct: 1 MKKLILNIALVLALVVSVTSCRETKEGAEDAADKVENA 38
BLAST of mRNA_P-canaliculata_contig101640.254.1 vs. uniprot
Match:
A0A5C7B8S8_9FLAO (Uncharacterized protein n=2 Tax=Psychroserpens burtonensis TaxID=49278 RepID=A0A5C7B8S8_9FLAO)
HSP 1 Score: 52.8 bits (125), Expect = 2.020e-6
Identity = 26/38 (68.42%), Postives = 34/38 (89.47%), Query Frame = 1
Query: 1 MKKLILNIVFVVALLVSVSSCRDTKEGADNAADSIGNA 114
MKKLILNI V+AL+VSV+SCR+TKEGA++A D++ NA
Sbjct: 1 MKKLILNIALVLALVVSVASCRETKEGAEDAPDAVENA 38
BLAST of mRNA_P-canaliculata_contig101640.254.1 vs. uniprot
Match:
UPI0006455ED9 (hypothetical protein n=1 Tax=Psychroserpens sp. Hel_I_66 TaxID=1250004 RepID=UPI0006455ED9)
HSP 1 Score: 52.8 bits (125), Expect = 2.020e-6
Identity = 25/37 (67.57%), Postives = 33/37 (89.19%), Query Frame = 1
Query: 1 MKKLILNIVFVVALLVSVSSCRDTKEGADNAADSIGN 111
MKKLILNI +AL+VSV+SCRDTK+GA+NA+D++ N
Sbjct: 1 MKKLILNIALALALVVSVTSCRDTKDGAENASDAVEN 37
BLAST of mRNA_P-canaliculata_contig101640.254.1 vs. uniprot
Match:
UPI0019531AD2 (hypothetical protein n=1 Tax=Flavihalobacter algicola TaxID=1719034 RepID=UPI0019531AD2)
HSP 1 Score: 52.4 bits (124), Expect = 2.900e-6
Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 1
Query: 1 MKKLILNIVFVVALLVSVSSCRDTKEGADNAADSIGNAV 117
MKK+ILNI V+AL+VSV+SCR+TKEGA+ A D++ NA
Sbjct: 1 MKKIILNIALVLALVVSVTSCRETKEGAEKAGDAVENAA 39
BLAST of mRNA_P-canaliculata_contig101640.254.1 vs. uniprot
Match:
UPI001953335C (hypothetical protein n=1 Tax=Flavihalobacter algicola TaxID=1719034 RepID=UPI001953335C)
HSP 1 Score: 52.8 bits (125), Expect = 4.830e-6
Identity = 26/38 (68.42%), Postives = 33/38 (86.84%), Query Frame = 1
Query: 1 MKKLILNIVFVVALLVSVSSCRDTKEGADNAADSIGNA 114
MKKLILNI V+AL+VSV+SCR+TKEGA+ A D++ NA
Sbjct: 1 MKKLILNIALVLALVVSVTSCRETKEGAEKAGDAVENA 38
BLAST of mRNA_P-canaliculata_contig101640.254.1 vs. uniprot
Match:
UPI000AFE1EA4 (hypothetical protein n=1 Tax=Psychroserpens mesophilus TaxID=325473 RepID=UPI000AFE1EA4)
HSP 1 Score: 50.8 bits (120), Expect = 3.110e-5
Identity = 27/38 (71.05%), Postives = 35/38 (92.11%), Query Frame = 1
Query: 1 MKKLILNIVFVVALLVSVSSCRDTKEGADNAADSIGNA 114
MKKL+LNIV V+AL+VSVS CR+TKEGA++AAD++ NA
Sbjct: 1 MKKLLLNIVLVLALIVSVS-CRETKEGAESAADAVENA 37
BLAST of mRNA_P-canaliculata_contig101640.254.1 vs. uniprot
Match:
A0A5C6ZN41_9FLAO (Uncharacterized protein n=2 Tax=Subsaximicrobium wynnwilliamsii TaxID=291179 RepID=A0A5C6ZN41_9FLAO)
HSP 1 Score: 48.5 bits (114), Expect = 9.000e-5
Identity = 24/37 (64.86%), Postives = 30/37 (81.08%), Query Frame = 1
Query: 1 MKKLILNIVFVVALLVSVSSCRDTKEGADNAADSIGN 111
MKKL+LN +ALLVSVSSCR+T+E DNAAD++ N
Sbjct: 2 MKKLVLNSALALALLVSVSSCRETEESNDNAADAVEN 38
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101640.254.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 10
0 1 Expect = 6.55e-8 / Id = 83.54 Expect = 2.51e-7 / Id = 71.79 Expect = 7.27e-7 / Id = 68.42 Expect = 1.36e-6 / Id = 71.05 Expect = 2.02e-6 / Id = 68.42 Expect = 2.02e-6 / Id = 67.57 Expect = 2.90e-6 / Id = 64.10 Expect = 4.83e-6 / Id = 68.42 Expect = 3.11e-5 / Id = 71.05 Expect = 9.00e-5 / Id = 64.86 Sequence UPI00058D053C UPI001F506EE0 UPI000478D4D8 UPI001E48C850 A0A5C7B8S8_9FLAO UPI0006455ED9 UPI0019531AD2 UPI001953335C UPI000AFE1EA4 A0A5C6ZN41_9FLAO back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101640.254.1
>prot_P-canaliculata_contig101640.254.1 ID=prot_P-canaliculata_contig101640.254.1|Name=mRNA_P-canaliculata_contig101640.254.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=147bp
MKKLILNIVFVVALLVSVSSCRDTKEGADNAADSIGNAVDNAGDAIGDAA back to top mRNA from alignment at P-canaliculata_contig101640:445..885-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig101640.254.1 ID=mRNA_P-canaliculata_contig101640.254.1|Name=mRNA_P-canaliculata_contig101640.254.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=441bp|location=Sequence derived from alignment at P-canaliculata_contig101640:445..885- (Pelvetia canaliculata dioecious)ATGAAAAAATTAATTTTGAACATCGTATTTGTAGTGGCACTTTTAGTGTC
TGTATCCTCATGTAGAGATACTAAAGAGGGAGCAGACAATGCTGCTGATT
CAATTGGCAACGCTGTTGATAATGCAGGAGATGCTATTGGAGATGCTGCT
GAAGCTACAGGCGATGCTATTGAAGATGCTGCCGAAGCAACAGGCGACGC
TATTGAAGATGGTGTTGATGCTGTAAAAGAAGGCGCTGAAAATGCTGCTG
AAGCCACAGGAAATGTCATTGACTCAACAGGATCAGCTATTAAAGAAGGT
GCTAATAAGATCAAAGACGGTGCTAAAGAAATTGCAAACGATGCTAAGGA
TGCTATGAATAACGCAAAAGATGGTGCTAAAAATAAGGCGAAGGATGTGA
AAGATGCTGCCAATAGTGCAGCAAATAAAACTAAAGAAGAT back to top Coding sequence (CDS) from alignment at P-canaliculata_contig101640:445..885-
>mRNA_P-canaliculata_contig101640.254.1 ID=mRNA_P-canaliculata_contig101640.254.1|Name=mRNA_P-canaliculata_contig101640.254.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=882bp|location=Sequence derived from alignment at P-canaliculata_contig101640:445..885- (Pelvetia canaliculata dioecious) back to top