mRNA_P-canaliculata_contig101361.226.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_P-canaliculata_contig101361.226.1 vs. uniprot
Match: A0A518EZB5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EZB5_9BACT)

HSP 1 Score: 218 bits (556), Expect = 3.430e-69
Identity = 101/182 (55.49%), Postives = 137/182 (75.27%), Query Frame = 1

Query:    1 MEASAPRRPAVPAYSVTALMQAPEQKLGETLSLAVQFHSEVEEWNPFLSRFDPAEFRCVKVWADEQWLWIKEEYESPATRLFVRRGTIAEAMMDGAKAHDRLRVYAVVREMHAGEAWIEVTDAERTEEQTPEGTVLHAISAMKLIDRDGWALAVSELDRALRPTLPGHVRRELEQIRDQCQA 546
            +EA+AP  P +P YS++AL+  PE+KLGE   +  Q H E+++W+PFL+RF   ++RC+  WADEQWLWIKEE+++PA   FVRRG+  +  +   + HDRL++   VRE+HAG  WIE+T A  TE QTPEGT+LHAI A+ +I+R+GWALA SEL+RAL+P LPGHVRREL  I +QC+A
Sbjct:   28 VEAAAPVPPVIPTYSISALLYQPERKLGEEHRVFAQLHGEIDDWHPFLTRFHSGDYRCLTFWADEQWLWIKEEFDAPAVDFFVRRGSEVDRRLRQCRKHDRLQLDLEVREVHAGRTWIEITGATLTEAQTPEGTILHAIRALDMIEREGWALAASELERALKPDLPGHVRRELRTILEQCRA 209

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BLAST of mRNA_P-canaliculata_contig101361.226.1 vs. uniprot
Match: A0A7C7YUK0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C7YUK0_9BACT)

HSP 1 Score: 114 bits (285), Expect = 2.940e-28
Identity = 55/150 (36.67%), Postives = 85/150 (56.67%), Query Frame = 1

Query:   79 LGETLSLAVQFHSEVEEWNPFLSRFDPAEFRCVKVWADEQWLWIKEEYESPATRLFVRRGTIAEAMMDGAKAHDRLRVYAVVREMHAGEAWIEVTDAERTEEQTPEGTVLHAISAMKLIDRDGWALAVSELDRALRPTLPGHVRRELEQI 528
            LG  + + VQ HS  E WNPFL+RF P EF C++ W+D Q+ W++ ++E P  R+F RRG+ AE  +  AK + R  +   VR +  G+ W+EV+  +        G VLHA   ++ +++  W  A  E +RA    LP   R EL+++
Sbjct:   61 LGNRVQITVQMHSYQESWNPFLTRFGPREFVCLRGWSDAQFPWLRGDFEQPLMRVFARRGSAAEWALADAKRYQRFELTCAVRAVFGGQPWLEVSAVKPLARNLGTGCVLHAARGLEFMEKGLWQAARLEFERATAGALPRVAREELQRL 210

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BLAST of mRNA_P-canaliculata_contig101361.226.1 vs. uniprot
Match: A0A7Y4WIV0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4WIV0_9BACT)

HSP 1 Score: 111 bits (278), Expect = 3.750e-27
Identity = 64/164 (39.02%), Postives = 96/164 (58.54%), Query Frame = 1

Query:   43 SVTALMQAPEQKLGETLSLAVQFHSEVEEWNPFLSRFDPAEFRCVKVWADEQWLWIKEEYESPATRLFVRRGTIAEAMMDGAKAHDRLRVYAVVREMHAGEAWIEVTDAERTEEQTPEGTVLHAISAMKLIDRDGWALAVSELDRALRPTLPGH-VRRELEQIR 531
            +++AL   P + LG  +   +QF + VE+WNP+LSRF+PA +  ++VW DE   W +  +E+PA RLFVRRG   E ++  A+ + R  V A VRE   GEAW+E+ +    E +  EGT+LH   A +L     + LA+ + +RA    L  H +   LE+IR
Sbjct:   39 TLSALRAQPGRYLGLEVRFVLQFRALVEDWNPYLSRFEPARWLALEVWPDEALNWERAAFETPARRLFVRRGGGFEPLVRRARIYQRFEVRARVREAFLGEAWLELLELVPLEGEVGEGTILHVTRARELAAEGQFDLALDQYERARSAPLSPHALAAVLEEIR 202

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BLAST of mRNA_P-canaliculata_contig101361.226.1 vs. uniprot
Match: A0A518CW80_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518CW80_9BACT)

HSP 1 Score: 96.7 bits (239), Expect = 2.010e-21
Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 1

Query:  130 WNPFLSRFDPAEFRCVKVWADEQWLWIKEEYESPATRLFVRRGTIAEAMMDGAKAHDRLRVYAVVREMHAGEAWIEVTDAERTEEQTPEGTVLHAISAMKLIDRDGWALAVSELDRALRPTLPGHVRRELEQIRDQCQATIDAQNA 567
            W+P L+RFD A +  ++ W+D+  LW +  +E+PA  LF RRGT A   +  A  +DR+ V   VR++ AGE WIE+    R      E TV HA  A +L       LA SE++RAL   +P H R  L  I ++ +   D  ++
Sbjct:   66 WDPLLTRFDGATWLRLEAWSDDAALWERASFENPAPYLFARRGTGAAQALLAASPYDRIEVEGAVRQVFAGEPWIEIWAVHRKGVALTEATVFHAARAERLEREGNLELARSEIERALAAPMPEHHRAPLLAIAERLEVPADGSDS 211

The following BLAST results are available for this feature:

BLAST of mRNA_P-canaliculata_contig101361.226.1 vs. uniprot

BLAST of mRNA_P-canaliculata_contig101361.226.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
A0A518EZB5_9BACT	3.430e-69	55.49	Uncharacterized protein n=1 Tax=Planctomycetes bac...	[more]
A0A7C7YUK0_9BACT	2.940e-28	36.67	Uncharacterized protein n=1 Tax=Planctomycetes bac...	[more]
A0A7Y4WIV0_9BACT	3.750e-27	39.02	Uncharacterized protein n=1 Tax=Planctomycetes bac...	[more]
A0A518CW80_9BACT	2.010e-21	36.99	Uncharacterized protein n=1 Tax=Planctomycetes bac...	[more]

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815587.232962-CDS-P-canaliculata_contig101361:209..782	1622815587.232962-CDS-P-canaliculata_contig101361:209..782	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig101361 210..782 -
1693494152.3814657-CDS-P-canaliculata_contig101361:209..782	1693494152.3814657-CDS-P-canaliculata_contig101361:209..782	Pelvetia canaliculata dioecious	CDS	P-canaliculata_contig101361 210..782 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-canaliculata_contig101361.226.1	prot_P-canaliculata_contig101361.226.1	Pelvetia canaliculata dioecious	polypeptide	P-canaliculata_contig101361 210..782 -