Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 1 |
| Model size | 771 |
| Cds size | 771 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815586.987668-CDS-P-canaliculata_contig101322:206..977 | 1622815586.987668-CDS-P-canaliculata_contig101322:206..977 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101322 207..977 + |
| 1693494152.289484-CDS-P-canaliculata_contig101322:206..977 | 1693494152.289484-CDS-P-canaliculata_contig101322:206..977 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101322 207..977 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101322.222.1 >prot_P-canaliculata_contig101322.222.1 ID=prot_P-canaliculata_contig101322.222.1|Name=mRNA_P-canaliculata_contig101322.222.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=257bp
RLLRFRLRTILLLILLASAWMAWHLDRSKKQVRAVEGVTSTGGSVIYDFK
FDGDPVFTNYRENAESPYPKFILDAVGYDFLHSVVSIRLNPNQDSNDNNK
QSTDWAEHLEGVKNLRHVYMRGNQVDDEVLKRLGKLKHLRSVNVWFGTSV
TDKGIQDLAKSRKIKSVRFQHGGLTDESLKHLSTLPEIECIDLQGNCLSD
KGLNYLHDKTNLSELWVGLGNNNITNRGLKKLFRLKNIKVLGIQNIDATQ
NEVNLLK back to topmRNA from alignment at P-canaliculata_contig101322:207..977+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig101322.222.1 ID=mRNA_P-canaliculata_contig101322.222.1|Name=mRNA_P-canaliculata_contig101322.222.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=771bp|location=Sequence derived from alignment at P-canaliculata_contig101322:207..977+ (Pelvetia canaliculata dioecious)
CGTTTACTCCGATTCAGACTGCGAACAATACTACTGCTTATTTTGTTGGC
TAGTGCTTGGATGGCTTGGCATTTGGACCGCTCGAAGAAGCAAGTACGTG
CTGTCGAGGGGGTCACCAGCACGGGCGGCTCGGTCATTTACGATTTCAAA
TTCGATGGCGATCCGGTCTTTACGAACTATCGGGAGAATGCCGAATCGCC
TTATCCCAAATTTATACTGGACGCAGTTGGATACGACTTCCTTCACTCTG
TAGTGAGCATACGACTAAACCCGAACCAAGACAGCAATGACAACAACAAA
CAGTCAACTGACTGGGCGGAACACTTAGAGGGCGTTAAGAACTTACGGCA
TGTTTATATGCGGGGGAATCAAGTAGATGATGAAGTCTTGAAACGTCTTG
GAAAGTTAAAACACTTGAGAAGTGTCAACGTTTGGTTTGGGACTTCTGTT
ACGGATAAAGGCATTCAGGATTTGGCAAAGTCTCGTAAGATTAAATCAGT
TAGATTCCAACACGGAGGGCTAACTGACGAATCACTAAAGCATTTGTCAA
CGCTTCCTGAAATCGAGTGTATCGACTTGCAAGGAAACTGCTTGTCCGAC
AAAGGACTGAATTATTTGCACGATAAAACCAACCTTTCGGAACTTTGGGT
TGGCTTGGGCAATAACAACATTACCAACCGCGGATTAAAAAAACTTTTCC
GTTTGAAAAATATAAAAGTACTTGGAATCCAAAATATTGATGCCACTCAA
AATGAAGTTAATTTGCTAAAG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig101322:207..977+ >mRNA_P-canaliculata_contig101322.222.1 ID=mRNA_P-canaliculata_contig101322.222.1|Name=mRNA_P-canaliculata_contig101322.222.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1542bp|location=Sequence derived from alignment at P-canaliculata_contig101322:207..977+ (Pelvetia canaliculata dioecious)
CGTTTACTCCGATTCAGACTGCGAACAATACTACTGCTTATTTTGTTGGC
TAGTGCTTGGATGGCTTGGCATTTGGACCGCTCGAAGAAGCAAGTACGTG
CTGTCGAGGGGGTCACCAGCACGGGCGGCTCGGTCATTTACGATTTCAAA
TTCGATGGCGATCCGGTCTTTACGAACTATCGGGAGAATGCCGAATCGCC
TTATCCCAAATTTATACTGGACGCAGTTGGATACGACTTCCTTCACTCTG
TAGTGAGCATACGACTAAACCCGAACCAAGACAGCAATGACAACAACAAA
CAGTCAACTGACTGGGCGGAACACTTAGAGGGCGTTAAGAACTTACGGCA
TGTTTATATGCGGGGGAATCAAGTAGATGATGAAGTCTTGAAACGTCTTG
GAAAGTTAAAACACTTGAGAAGTGTCAACGTTTGGTTTGGGACTTCTGTT
ACGGATAAAGGCATTCAGGATTTGGCAAAGTCTCGTAAGATTAAATCAGT
TAGATTCCAACACGGAGGGCTAACTGACGAATCACTAAAGCATTTGTCAA
CGCTTCCTGAAATCGAGTGTATCGACTTGCAAGGAAACTGCTTGTCCGAC
AAAGGACTGAATTATTTGCACGATAAAACCAACCTTTCGGAACTTTGGGT
TGGCTTGGGCAATAACAACATTACCAACCGCGGATTAAAAAAACTTTTCC
GTTTGAAAAATATAAAAGTACTTGGAATCCAAAATATTGATGCCACTCAA
AATGAAGTTAATTTGCTAAAGCGTTTACTCCGATTCAGACTGCGAACAAT
ACTACTGCTTATTTTGTTGGCTAGTGCTTGGATGGCTTGGCATTTGGACC
GCTCGAAGAAGCAAGTACGTGCTGTCGAGGGGGTCACCAGCACGGGCGGC
TCGGTCATTTACGATTTCAAATTCGATGGCGATCCGGTCTTTACGAACTA
TCGGGAGAATGCCGAATCGCCTTATCCCAAATTTATACTGGACGCAGTTG
GATACGACTTCCTTCACTCTGTAGTGAGCATACGACTAAACCCGAACCAA
GACAGCAATGACAACAACAAACAGTCAACTGACTGGGCGGAACACTTAGA
GGGCGTTAAGAACTTACGGCATGTTTATATGCGGGGGAATCAAGTAGATG
ATGAAGTCTTGAAACGTCTTGGAAAGTTAAAACACTTGAGAAGTGTCAAC
GTTTGGTTTGGGACTTCTGTTACGGATAAAGGCATTCAGGATTTGGCAAA
GTCTCGTAAGATTAAATCAGTTAGATTCCAACACGGAGGGCTAACTGACG
AATCACTAAAGCATTTGTCAACGCTTCCTGAAATCGAGTGTATCGACTTG
CAAGGAAACTGCTTGTCCGACAAAGGACTGAATTATTTGCACGATAAAAC
CAACCTTTCGGAACTTTGGGTTGGCTTGGGCAATAACAACATTACCAACC
GCGGATTAAAAAAACTTTTCCGTTTGAAAAATATAAAAGTACTTGGAATC
CAAAATATTGATGCCACTCAAAATGAAGTTAATTTGCTAAAG back to top
|