Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 527 |
| Cds size | 306 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815586.5810916-UTR-P-canaliculata_contig10129:4356..4389 | 1622815586.5810916-UTR-P-canaliculata_contig10129:4356..4389 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10129 4357..4389 + |
| 1693494152.0572248-UTR-P-canaliculata_contig10129:4356..4389 | 1693494152.0572248-UTR-P-canaliculata_contig10129:4356..4389 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10129 4357..4389 + |
| 1622815586.6087484-UTR-P-canaliculata_contig10129:4695..4883 | 1622815586.6087484-UTR-P-canaliculata_contig10129:4695..4883 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10129 4696..4883 + |
| 1693494152.081961-UTR-P-canaliculata_contig10129:4695..4883 | 1693494152.081961-UTR-P-canaliculata_contig10129:4695..4883 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10129 4696..4883 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815586.5948148-CDS-P-canaliculata_contig10129:4389..4695 | 1622815586.5948148-CDS-P-canaliculata_contig10129:4389..4695 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10129 4390..4695 + |
| 1693494152.0709507-CDS-P-canaliculata_contig10129:4389..4695 | 1693494152.0709507-CDS-P-canaliculata_contig10129:4389..4695 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10129 4390..4695 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10129.218.1 >prot_P-canaliculata_contig10129.218.1 ID=prot_P-canaliculata_contig10129.218.1|Name=mRNA_P-canaliculata_contig10129.218.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=102bp
MTLTSDNYPRNISRRVILLQTQCILTQNTAATPAPPHLAPTKIYKRQLLK
ANTLPPPSDFFASKTLVASPKYHFRPFETQLLIERGHTNPMLSIRRLSTG
V* back to topmRNA from alignment at P-canaliculata_contig10129:4357..4883+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig10129.218.1 ID=mRNA_P-canaliculata_contig10129.218.1|Name=mRNA_P-canaliculata_contig10129.218.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=527bp|location=Sequence derived from alignment at P-canaliculata_contig10129:4357..4883+ (Pelvetia canaliculata dioecious)
GTCCCGACCCAGCACCAACTTTACCGACAACAAATGACCCTCACCTCCGA
CAATTATCCTCGAAACATATCGAGACGCGTCATACTGCTCCAGACCCAGT
GCATTCTAACCCAAAACACTGCAGCAACTCCTGCGCCACCACATCTAGCG
CCCACGAAAATCTACAAGAGGCAATTACTCAAGGCGAACACGCTACCGCC
ACCCTCCGATTTCTTCGCCAGTAAAACCCTGGTTGCCTCTCCCAAGTACC
ACTTCCGCCCGTTCGAAACACAGTTACTGATTGAAAGAGGTCACACAAAC
CCCATGCTGTCGATTAGACGTCTCTCAACAGGAGTGTGAAGTGAGAGGAA
ACGTTCCCAAAACACACCATAAAAAATGCCCCCCCCCCTGCATTGTACGC
AAGAGGCATCAAAGTAATTGTTGCATTAGACGGCCCTTGCCGGGAACTAC
GCTCCTACTCGGGCGACTACACACGGTGCCACCTCTTTGCCCCGACTGCA
CATAATACGTCATCTCCGGGCGAAATT back to topCoding sequence (CDS) from alignment at P-canaliculata_contig10129:4357..4883+ >mRNA_P-canaliculata_contig10129.218.1 ID=mRNA_P-canaliculata_contig10129.218.1|Name=mRNA_P-canaliculata_contig10129.218.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=612bp|location=Sequence derived from alignment at P-canaliculata_contig10129:4357..4883+ (Pelvetia canaliculata dioecious)
ATGACCCTCACCTCCGACAATTATCCTCGAAACATATCGAGACGCGTCAT
ACTGCTCCAGACCCAGTGCATTCTAACCCAAAACACTGCAGCAACTCCTG
CGCCACCACATCTAGCGCCCACGAAAATCTACAAGAGGCAATTACTCAAG
GCGAACACGCTACCGCCACCCTCCGATTTCTTCGCCAGTAAAACCCTGGT
TGCCTCTCCCAAGTACCACTTCCGCCCGTTCGAAACACAGTTACTGATTG
AAAGAGGTCACACAAACCCCATGCTGTCGATTAGACGTCTCTCAACAGGA
GTGTGAATGACCCTCACCTCCGACAATTATCCTCGAAACATATCGAGACG
CGTCATACTGCTCCAGACCCAGTGCATTCTAACCCAAAACACTGCAGCAA
CTCCTGCGCCACCACATCTAGCGCCCACGAAAATCTACAAGAGGCAATTA
CTCAAGGCGAACACGCTACCGCCACCCTCCGATTTCTTCGCCAGTAAAAC
CCTGGTTGCCTCTCCCAAGTACCACTTCCGCCCGTTCGAAACACAGTTAC
TGATTGAAAGAGGTCACACAAACCCCATGCTGTCGATTAGACGTCTCTCA
ACAGGAGTGTGA back to top
|