Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 591 |
| Cds size | 462 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815586.3818526-UTR-P-canaliculata_contig10127:8298..8404 | 1622815586.3818526-UTR-P-canaliculata_contig10127:8298..8404 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10127 8299..8404 + |
| 1693494151.9676306-UTR-P-canaliculata_contig10127:8298..8404 | 1693494151.9676306-UTR-P-canaliculata_contig10127:8298..8404 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10127 8299..8404 + |
| 1622815586.4161582-UTR-P-canaliculata_contig10127:8866..8889 | 1622815586.4161582-UTR-P-canaliculata_contig10127:8866..8889 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10127 8867..8889 + |
| 1693494151.9853868-UTR-P-canaliculata_contig10127:8866..8889 | 1693494151.9853868-UTR-P-canaliculata_contig10127:8866..8889 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10127 8867..8889 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815586.3969557-CDS-P-canaliculata_contig10127:8404..8866 | 1622815586.3969557-CDS-P-canaliculata_contig10127:8404..8866 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10127 8405..8866 + |
| 1693494151.9764051-CDS-P-canaliculata_contig10127:8404..8866 | 1693494151.9764051-CDS-P-canaliculata_contig10127:8404..8866 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10127 8405..8866 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10127.216.1 >prot_P-canaliculata_contig10127.216.1 ID=prot_P-canaliculata_contig10127.216.1|Name=mRNA_P-canaliculata_contig10127.216.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=154bp
MQRSGFENRARYPVLRCESQSTLLNWETVLRSMPVVMWLPDLRQPMLELH
GLFEFIRSFRLRKQLCLTRSRWSSNHTPWLSAFCDLASVLPIRSPQSNQC
DPIFYVRVLRSSTSVTNSFTFEKPTRSKFFLRTGENPYDVAIVLSQIQGG
TEL* back to topmRNA from alignment at P-canaliculata_contig10127:8299..8889+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig10127.216.1 ID=mRNA_P-canaliculata_contig10127.216.1|Name=mRNA_P-canaliculata_contig10127.216.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=591bp|location=Sequence derived from alignment at P-canaliculata_contig10127:8299..8889+ (Pelvetia canaliculata dioecious)
CGCTTCAGTACATATGCGTGCGGGCGATCGAAGTTCTCTGGAGAGATGCT
ACTCGCAAACACATTAAACAAGTGCTCGGATCCTGGGCAGCACTGCTACT
GTACCAATGCAACGTTCCGGTTTCGAAAACCGCGCGAGATACCCAGTGCT
AAGATGCGAAAGCCAAAGTACCTTATTGAATTGGGAAACAGTGCTGAGAT
CGATGCCCGTTGTGATGTGGCTGCCCGATTTGCGACAACCAATGCTCGAG
CTCCATGGCCTGTTCGAGTTTATAAGGTCCTTTCGCCTGCGCAAGCAACT
ATGCTTGACCCGATCCAGATGGTCTTCGAATCATACGCCATGGCTGTCCG
CTTTTTGCGATTTAGCATCGGTGCTACCAATTCGCTCGCCTCAAAGCAAC
CAATGTGATCCAATTTTTTATGTTCGCGTTTTGCGATCGAGCACCAGTGT
TACTAATTCGTTCACCTTCGAGAAACCAACTCGATCTAAGTTTTTCCTCC
GAACGGGGGAGAACCCGTACGACGTGGCAATTGTTTTGAGCCAGATCCAG
GGTGGAACTGAACTTTGAGGCACTAGCCTGTCACGGAAGGA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig10127:8299..8889+ >mRNA_P-canaliculata_contig10127.216.1 ID=mRNA_P-canaliculata_contig10127.216.1|Name=mRNA_P-canaliculata_contig10127.216.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=924bp|location=Sequence derived from alignment at P-canaliculata_contig10127:8299..8889+ (Pelvetia canaliculata dioecious)
ATGCAACGTTCCGGTTTCGAAAACCGCGCGAGATACCCAGTGCTAAGATG
CGAAAGCCAAAGTACCTTATTGAATTGGGAAACAGTGCTGAGATCGATGC
CCGTTGTGATGTGGCTGCCCGATTTGCGACAACCAATGCTCGAGCTCCAT
GGCCTGTTCGAGTTTATAAGGTCCTTTCGCCTGCGCAAGCAACTATGCTT
GACCCGATCCAGATGGTCTTCGAATCATACGCCATGGCTGTCCGCTTTTT
GCGATTTAGCATCGGTGCTACCAATTCGCTCGCCTCAAAGCAACCAATGT
GATCCAATTTTTTATGTTCGCGTTTTGCGATCGAGCACCAGTGTTACTAA
TTCGTTCACCTTCGAGAAACCAACTCGATCTAAGTTTTTCCTCCGAACGG
GGGAGAACCCGTACGACGTGGCAATTGTTTTGAGCCAGATCCAGGGTGGA
ACTGAACTTTGAATGCAACGTTCCGGTTTCGAAAACCGCGCGAGATACCC
AGTGCTAAGATGCGAAAGCCAAAGTACCTTATTGAATTGGGAAACAGTGC
TGAGATCGATGCCCGTTGTGATGTGGCTGCCCGATTTGCGACAACCAATG
CTCGAGCTCCATGGCCTGTTCGAGTTTATAAGGTCCTTTCGCCTGCGCAA
GCAACTATGCTTGACCCGATCCAGATGGTCTTCGAATCATACGCCATGGC
TGTCCGCTTTTTGCGATTTAGCATCGGTGCTACCAATTCGCTCGCCTCAA
AGCAACCAATGTGATCCAATTTTTTATGTTCGCGTTTTGCGATCGAGCAC
CAGTGTTACTAATTCGTTCACCTTCGAGAAACCAACTCGATCTAAGTTTT
TCCTCCGAACGGGGGAGAACCCGTACGACGTGGCAATTGTTTTGAGCCAG
ATCCAGGGTGGAACTGAACTTTGA back to top
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