Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 2 |
| Model size | 326 |
| Cds size | 324 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815586.2907324-CDS-P-canaliculata_contig101232:602..809 | 1622815586.2907324-CDS-P-canaliculata_contig101232:602..809 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101232 603..809 + |
| 1693494151.9374676-CDS-P-canaliculata_contig101232:602..809 | 1693494151.9374676-CDS-P-canaliculata_contig101232:602..809 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101232 603..809 + |
| 1622815586.3041432-CDS-P-canaliculata_contig101232:869..986 | 1622815586.3041432-CDS-P-canaliculata_contig101232:869..986 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101232 870..986 + |
| 1693494151.9460762-CDS-P-canaliculata_contig101232:869..986 | 1693494151.9460762-CDS-P-canaliculata_contig101232:869..986 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig101232 870..986 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101232.213.1 >prot_P-canaliculata_contig101232.213.1 ID=prot_P-canaliculata_contig101232.213.1|Name=mRNA_P-canaliculata_contig101232.213.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=108bp
PRVRFVPVAHDTAWLSHVRLLPCRTHASRNMLPRLVARPAARGLRARTLS
IRRSSTAALPLTLSHSSRISPLPVPDPPPHDHGPDACIAVSGNGLVLRRG
GGRGQAM* back to topmRNA from alignment at P-canaliculata_contig101232:603..986+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig101232.213.1 ID=mRNA_P-canaliculata_contig101232.213.1|Name=mRNA_P-canaliculata_contig101232.213.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=384bp|location=Sequence derived from alignment at P-canaliculata_contig101232:603..986+ (Pelvetia canaliculata dioecious)
CCGAGGGTTCGCTTTGTCCCCGTGGCGCACGATACGGCTTGGCTCTCGCA
CGTTCGTCTTTTGCCCTGCCGCACACACGCATCACGGAACATGCTCCCCC
GACTCGTCGCACGCCCGGCGGCCCGCGGCCTCCGCGCCCGAACCCTCTCG
ATCCGCCGCTCCAGCACGGCAGCTTTGCCCTTGACGCTATCGCACTCCTC
CCGCATCGTCAGTCCCCCGCCAGACGTCTTGTCTGTTTCCCCGCTAAACG
TCCACCGCCCCCCGCAGTCCCCCCTCCCCGTCCCCGATCCCCCGCCGCAT
GACCATGGCCCGGACGCGTGTATTGCTGTCAGCGGCAACGGGCTGGTTCT
GAGGCGGGGTGGAGGGCGGGGTCAGGCTATGTAA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig101232:603..986+ >mRNA_P-canaliculata_contig101232.213.1 ID=mRNA_P-canaliculata_contig101232.213.1|Name=mRNA_P-canaliculata_contig101232.213.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=648bp|location=Sequence derived from alignment at P-canaliculata_contig101232:603..986+ (Pelvetia canaliculata dioecious)
CCGAGGGTTCGCTTTGTCCCCGTGGCGCACGATACGGCTTGGCTCTCGCA
CGTTCGTCTTTTGCCCTGCCGCACACACGCATCACGGAACATGCTCCCCC
GACTCGTCGCACGCCCGGCGGCCCGCGGCCTCCGCGCCCGAACCCTCTCG
ATCCGCCGCTCCAGCACGGCAGCTTTGCCCTTGACGCTATCGCACTCCTC
CCGCATCCCGAGGGTTCGCTTTGTCCCCGTGGCGCACGATACGGCTTGGC
TCTCGCACGTTCGTCTTTTGCCCTGCCGCACACACGCATCACGGAACATG
CTCCCCCGACTCGTCGCACGCCCGGCGGCCCGCGGCCTCCGCGCCCGAAC
CCTCTCGATCCGCCGCTCCAGCACGGCAGCTTTGCCCTTGACGCTATCGC
ACTCCTCCCGCATCTCCCCCCTCCCCGTCCCCGATCCCCCGCCGCATGAC
CATGGCCCGGACGCGTGTATTGCTGTCAGCGGCAACGGGCTGGTTCTGAG
GCGGGGTGGAGGGCGGGGTCAGGCTATGTAATCCCCCCTCCCCGTCCCCG
ATCCCCCGCCGCATGACCATGGCCCGGACGCGTGTATTGCTGTCAGCGGC
AACGGGCTGGTTCTGAGGCGGGGTGGAGGGCGGGGTCAGGCTATGTAA back to top
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