mRNA_P-canaliculata_contig101050.191.1 (mRNA) Pelvetia canaliculata dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig101050.191.1 vs. uniprot
Match: A0A851GMS5_9BACT (Uncharacterized protein n=1 Tax=Oceaniferula marina TaxID=2748318 RepID=A0A851GMS5_9BACT) HSP 1 Score: 83.6 bits (205), Expect = 5.510e-17 Identity = 42/128 (32.81%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 1 IKNKAGKSISAELISLDGDHVKMRKSAGRRDFIVPLHTLDPKSATLIRKEAAAMPEVMPDIEIDVSVSTRRRKDGKSTYVKAMTVGGKVIIENEDLEHKFPASKARIVFVGQDQRYPEKYQVLGTQDF 384
I +K G+++ EL+S G+ V +++ + F + TL +S I+++ + E P I+ V VS RR+ + S Y+K MT+ KV + NED P + I+F+GQ+QRY +++ VL + F
Sbjct: 25 ISDKKGRTMIVELVSRQGEKVVIKRLKDNKTFTIDPSTLSEESQQEIKEKLQEVKEAYPPIDATVVVSKRRKSENSSYYMKEMTISSKVTLTNEDSNVLSPTCQCNILFIGQNQRYSDRFVVLANESF 152 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101050.191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig101050.191.1 >prot_P-canaliculata_contig101050.191.1 ID=prot_P-canaliculata_contig101050.191.1|Name=mRNA_P-canaliculata_contig101050.191.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=129bp IKNKAGKSISAELISLDGDHVKMRKSAGRRDFIVPLHTLDPKSATLIRKEback to top mRNA from alignment at P-canaliculata_contig101050:6..392- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig101050.191.1 ID=mRNA_P-canaliculata_contig101050.191.1|Name=mRNA_P-canaliculata_contig101050.191.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=387bp|location=Sequence derived from alignment at P-canaliculata_contig101050:6..392- (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig101050:6..392- >mRNA_P-canaliculata_contig101050.191.1 ID=mRNA_P-canaliculata_contig101050.191.1|Name=mRNA_P-canaliculata_contig101050.191.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=774bp|location=Sequence derived from alignment at P-canaliculata_contig101050:6..392- (Pelvetia canaliculata dioecious)back to top |