Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 605 |
| Cds size | 393 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815583.900645-UTR-P-canaliculata_contig10101:1819..1953 | 1622815583.900645-UTR-P-canaliculata_contig10101:1819..1953 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10101 1820..1953 - |
| 1693494150.6107113-UTR-P-canaliculata_contig10101:1819..1953 | 1693494150.6107113-UTR-P-canaliculata_contig10101:1819..1953 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10101 1820..1953 - |
| 1622815583.9362483-UTR-P-canaliculata_contig10101:2363..2441 | 1622815583.9362483-UTR-P-canaliculata_contig10101:2363..2441 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10101 2364..2441 - |
| 1693494150.6409678-UTR-P-canaliculata_contig10101:2363..2441 | 1693494150.6409678-UTR-P-canaliculata_contig10101:2363..2441 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig10101 2364..2441 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815583.9117866-CDS-P-canaliculata_contig10101:1953..2162 | 1622815583.9117866-CDS-P-canaliculata_contig10101:1953..2162 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10101 1954..2162 - |
| 1693494150.6194353-CDS-P-canaliculata_contig10101:1953..2162 | 1693494150.6194353-CDS-P-canaliculata_contig10101:1953..2162 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10101 1954..2162 - |
| 1622815583.9241784-CDS-P-canaliculata_contig10101:2179..2363 | 1622815583.9241784-CDS-P-canaliculata_contig10101:2179..2363 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10101 2180..2363 - |
| 1693494150.628451-CDS-P-canaliculata_contig10101:2179..2363 | 1693494150.628451-CDS-P-canaliculata_contig10101:2179..2363 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig10101 2180..2363 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10101.188.1 >prot_P-canaliculata_contig10101.188.1 ID=prot_P-canaliculata_contig10101.188.1|Name=mRNA_P-canaliculata_contig10101.188.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=131bp
MLDVKSKKCKTASCGKLPSFGIAGTKYREYCAHHAPEGMVDVKNRKCRME
GCGKVPPLRIAVLCNALFGRNSASQKQKVQNQTAGQGPVDRSGRHKNGGV
PCTAHQTTMRCRRNQSERCWPAPLREGNHC* back to topmRNA from alignment at P-canaliculata_contig10101:1820..2441- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig10101.188.1 ID=mRNA_P-canaliculata_contig10101.188.1|Name=mRNA_P-canaliculata_contig10101.188.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=622bp|location=Sequence derived from alignment at P-canaliculata_contig10101:1820..2441- (Pelvetia canaliculata dioecious)
GGCTGCGGCAAACGAGCGTCTTTCGGAGTTGCAGGTACGAAAACGGTGGA
GTACTGCGCACAGCACGCACTGGAAGGGATGCTCGACGTCAAGAGCAAAA
AGTGTAAAACCGCAAGCTGCGGCAAGCTACCGTCTTTCGGGATTGCAGGT
ACGAAATATAGGGAGTACTGTGCACATCACGCACCGGAGGGGATGGTCGA
CGTCAAGAACAGAAAGTGCAGAATGGAAGGCTGCGGCAAGGTACCGCCTT
TGAGAATTGCAGGTACGATAACGGCGGAGTACTGTGTAACGCACTCTTTG
GACGGAATTCTGCAAGTCAAAAGCAGAAAGTGCAGAACCAAACGGCGGGG
CAAGGACCCGTTGATCGAAGTGGGCGACACAAGAACGGCGGAGTACCGTG
CACAGCACACCAGACTACAATGCGGTGTCGAAGGAATCAGAGTGAGAGAT
GTTGGCCCGCACCACTCCGGGAAGGAAACCATTGCTAACGTAGTTCCGAG
TGTCGCAAAACATACAAGCGATCGTCCTCCTCCCACCAAGACAAGTCAGC
CGTCTGGTGCTAGCCGGGACTCTCGTAAGCGAGTACGACATCTAGAAGTT
ACGTCTACGGCGTCGAAACGAG back to topCoding sequence (CDS) from alignment at P-canaliculata_contig10101:1820..2441- >mRNA_P-canaliculata_contig10101.188.1 ID=mRNA_P-canaliculata_contig10101.188.1|Name=mRNA_P-canaliculata_contig10101.188.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=786bp|location=Sequence derived from alignment at P-canaliculata_contig10101:1820..2441- (Pelvetia canaliculata dioecious)
ATGCTCGACGTCAAGAGCAAAAAGTGTAAAACCGCAAGCTGCGGCAAGCT
ACCGTCTTTCGGGATTGCAGGTACGAAATATAGGGAGTACTGTGCACATC
ACGCACCGGAGGGGATGGTCGACGTCAAGAACAGAAAGTGCAGAATGGAA
GGCTGCGGCAAGGTACCGCCTTTGAGAATTGCAGATGCTCGACGTCAAGA
GCAAAAAGTGTAAAACCGCAAGCTGCGGCAAGCTACCGTCTTTCGGGATT
GCAGGTACGAAATATAGGGAGTACTGTGCACATCACGCACCGGAGGGGAT
GGTCGACGTCAAGAACAGAAAGTGCAGAATGGAAGGCTGCGGCAAGGTAC
CGCCTTTGAGAATTGCAGTACTGTGTAACGCACTCTTTGGACGGAATTCT
GCAAGTCAAAAGCAGAAAGTGCAGAACCAAACGGCGGGGCAAGGACCCGT
TGATCGAAGTGGGCGACACAAGAACGGCGGAGTACCGTGCACAGCACACC
AGACTACAATGCGGTGTCGAAGGAATCAGAGTGAGAGATGTTGGCCCGCA
CCACTCCGGGAAGGAAACCATTGCTAATACTGTGTAACGCACTCTTTGGA
CGGAATTCTGCAAGTCAAAAGCAGAAAGTGCAGAACCAAACGGCGGGGCA
AGGACCCGTTGATCGAAGTGGGCGACACAAGAACGGCGGAGTACCGTGCA
CAGCACACCAGACTACAATGCGGTGTCGAAGGAATCAGAGTGAGAGATGT
TGGCCCGCACCACTCCGGGAAGGAAACCATTGCTAA back to top
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