Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 324 |
| Cds size | 174 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815583.7273448-CDS-P-canaliculata_contig100970:668..791 | 1622815583.7273448-CDS-P-canaliculata_contig100970:668..791 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100970 669..791 - |
| 1693494150.5073707-CDS-P-canaliculata_contig100970:668..791 | 1693494150.5073707-CDS-P-canaliculata_contig100970:668..791 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100970 669..791 - |
| 1622815583.7379332-CDS-P-canaliculata_contig100970:803..854 | 1622815583.7379332-CDS-P-canaliculata_contig100970:803..854 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100970 804..854 - |
| 1693494150.5250275-CDS-P-canaliculata_contig100970:803..854 | 1693494150.5250275-CDS-P-canaliculata_contig100970:803..854 | Pelvetia canaliculata dioecious | CDS | P-canaliculata_contig100970 804..854 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815583.7474642-UTR-P-canaliculata_contig100970:854..1004 | 1622815583.7474642-UTR-P-canaliculata_contig100970:854..1004 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100970 855..1004 - |
| 1693494150.5432594-UTR-P-canaliculata_contig100970:854..1004 | 1693494150.5432594-UTR-P-canaliculata_contig100970:854..1004 | Pelvetia canaliculata dioecious | UTR | P-canaliculata_contig100970 855..1004 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig100970.184.1 >prot_P-canaliculata_contig100970.184.1 ID=prot_P-canaliculata_contig100970.184.1|Name=mRNA_P-canaliculata_contig100970.184.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=58bp
MEDRNPQTAALEEYNCKAASPRGSCKTRTWRKWKRPNEGLDLIKFVASAS
GPELRVV* back to topmRNA from alignment at P-canaliculata_contig100970:669..1004- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-canaliculata_contig100970.184.1 ID=mRNA_P-canaliculata_contig100970.184.1|Name=mRNA_P-canaliculata_contig100970.184.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=336bp|location=Sequence derived from alignment at P-canaliculata_contig100970:669..1004- (Pelvetia canaliculata dioecious)
TGGGCAGAGGCACAGCGGGGGCAAGTGTAAGTCCTGCCGCTTTGGTGTGT
GTGAGTGCTCCTCGGCGTTCCCTTGCTGAGTGAGGCCACTCCCTAAACGC
GGGTGAGTCGAAATCCCGGCGTGTGTGTGTGAGTGGAAGAGTTTTTAGAT
ATGGAGGATAGGAATCCCCAGACGGCAGCGCTCGAGGAATACAACTGCAA
AGCTAACTGCAAGGCTGCGAGTCCAAGAGGCAGCTGCAAGACGAGGACCT
GGAGGAAATGGAAGAGGCCGAATGAAGGACTAGATTTGATCAAATTTGTT
GCTTCTGCGTCCGGCCCGGAACTACGGGTGGTGTAA back to topCoding sequence (CDS) from alignment at P-canaliculata_contig100970:669..1004- >mRNA_P-canaliculata_contig100970.184.1 ID=mRNA_P-canaliculata_contig100970.184.1|Name=mRNA_P-canaliculata_contig100970.184.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=348bp|location=Sequence derived from alignment at P-canaliculata_contig100970:669..1004- (Pelvetia canaliculata dioecious)
ATGGAGGATAGGAATCCCCAGACGGCAGCGCTCGAGGAATACAACTGCAA
AATGGAGGATAGGAATCCCCAGACGGCAGCGCTCGAGGAATACAACTGCA
AAGCTGCGAGTCCAAGAGGCAGCTGCAAGACGAGGACCTGGAGGAAATGG
AAGAGGCCGAATGAAGGACTAGATTTGATCAAATTTGTTGCTTCTGCGTC
CGGCCCGGAACTACGGGTGGTGTAAGCTGCGAGTCCAAGAGGCAGCTGCA
AGACGAGGACCTGGAGGAAATGGAAGAGGCCGAATGAAGGACTAGATTTG
ATCAAATTTGTTGCTTCTGCGTCCGGCCCGGAACTACGGGTGGTGTAA back to top
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